mRNA_H-canaliculatus_F_contig10753.716.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10753.716.1
Unique NamemRNA_H-canaliculatus_F_contig10753.716.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: D8LLV8_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV8_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 7.670e-129
Identity = 198/208 (95.19%), Postives = 202/208 (97.12%), Query Frame = 1 
Query:    1 TQVIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFRE 624
            TQVIFKERW QKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAG+IEAIPDTVSIDALKKND  YTTLLDFFHRHFGP  SEGFQRARR+FVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFV+LMGGPSS CF+GFRE
Sbjct:  908 TQVIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFRE 1115
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A6H5JBM1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM1_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 3.220e-127
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFRE 624
            VIFKERW QKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAG+IEAIPDTVSIDALKKND  YTTLLDFFHRHFGP  SEGFQRARR+FVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFV+LMGGPSSACF+GFRE
Sbjct:  939 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPKSEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSACFKGFRE 1144
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A7S4DAE3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE3_HETAK)

HSP 1 Score: 249 bits (636), Expect = 1.260e-79
Identity = 132/205 (64.39%), Postives = 151/205 (73.66%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            VIFKE W  KE R+RR S +G    WRL+PVIVKA DDLRQE LASQ      +IL+ + L     +RPYDI+AT    GVIEA+PDTVSIDALK+ND Q+TTLLDFF R FG  GS GF  AR  FVESL+A  I+ YLL +KDRHNGNILLD+ G  IHIDFGFMLA +PG N NFE APFKLT E+VEL+GG  SACF+ FR
Sbjct:   22 VIFKESWADKEERVRRRSPIGHLPGWRLVPVIVKADDDLRQEMLASQLVKQVAQILRDAALPVY--VRPYDILATGGGCGVIEAVPDTVSIDALKRNDSQFTTLLDFFERRFGYEGSPGFIEARNCFVESLSAYSILCYLLNLKDRHNGNILLDSEGHAIHIDFGFMLARTPG-NANFERAPFKLTEEWVELLGGKGSACFRRFR 223
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A1V9ZTI6_9STRA (Phosphatidylinositol kinase (PIK-J) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTI6_9STRA)

HSP 1 Score: 259 bits (663), Expect = 3.820e-78
Identity = 128/205 (62.44%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            ++F+ERW +KE RLR  S+ G    WRL+PVIVK+ DDLRQEQ A+Q     H++   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKND  YTTLLDF+ R+FGP  S  F+RARR FVESLAA  IV Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFVELMGGP S+ F+ FR
Sbjct:  572 IVFRERWSEKEDRLRPTSEFGHLPGWRLIPVIVKSNDDLRQEQFAAQLIQQCHKVFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPQDSSRFKRARRNFVESLAAYSIVCYVFQIKDRHNGNILVDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFR 774
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A1V9Z3H6_9STRA (Phosphatidylinositol kinase (PIK-J) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3H6_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.000e-77
Identity = 128/205 (62.44%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            ++F+ERW +KE RLR  S+ G    WRL+PVIVK+ DDLRQEQ A+Q     H+I   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKND  YTTLLDF+ R+FGP  S  F+RARR FVESLAA  +V Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFVELMGGP S+ F+ FR
Sbjct:  593 IVFRERWSEKEDRLRALSEYGNLPGWRLIPVIVKSNDDLRQEQFAAQLIHQCHKIFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPEDSSRFKRARRNFVESLAAYSMVCYIFQIKDRHNGNILIDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFR 795
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A2D4BTD9_PYTIN (Phosphatidylinositol 3 and 4-kinase-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTD9_PYTIN)

HSP 1 Score: 261 bits (668), Expect = 1.410e-77
Identity = 129/205 (62.93%), Postives = 157/205 (76.59%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            ++F+ERW  KE R+R+ S  G    WRL+PVIVK+ DDLRQEQ A+Q  A   RI +   L  R  LRPY+++ATS  AG+IEA+PDTVS+D+LK+ND +YTTLLDFFHR FGP+ S  F++ARR FVESLAA  I+ Y+ Q+KDRHNGNIL+D  G +IHIDFGF+L NSPG N NFE APFKLT EFVELMGGP SA F+ FR
Sbjct:  860 IVFRERWSDKEDRIRKTSPFGDHPGWRLLPVIVKSNDDLRQEQFAAQLIAQCDRIFRAYSLPLR--LRPYNVIATSPTAGLIEAVPDTVSLDSLKRNDPEYTTLLDFFHRLFGPSDSFTFRQARRNFVESLAAYSILCYVFQIKDRHNGNILVDTEGHIIHIDFGFLLTNSPGSNLNFERAPFKLTDEFVELMGGPRSATFRYFR 1062
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: T0QYL2_SAPDV (PI3K/PI4K catalytic domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QYL2_SAPDV)

HSP 1 Score: 258 bits (659), Expect = 1.670e-77
Identity = 127/205 (61.95%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            ++F+ERW +KE RLR +S  G    WRL+PVIVK+ DDLRQEQ A+Q     H++   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKND  YTTLLDF+ R+FGP  S  F+RARR FVESLAA  +V Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFVELMGGP S+ F+ FR
Sbjct:  582 IVFRERWSEKEDRLRASSPYGHLPGWRLIPVIVKSNDDLRQEQFAAQLIQQCHKVFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPPDSSRFKRARRNFVESLAAYSMVCYVFQIKDRHNGNILVDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFR 784
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A6G0XDX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDX5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 7.890e-77
Identity = 125/205 (60.98%), Postives = 155/205 (75.61%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            + F+ERW +K+ RLR  S  G    WRL+PVI+K+ DDLRQEQLA+Q  A  H+I +++ L  +  LRPY ++ATS   G+IEA+PDTVS+D+LKKND  YTTL DF+ R+FGP     F+RARR+FVESLAA  IV Y+ Q+KDRHNGNIL+DA G +IHIDFGF+  NSPGGN  FESAPFKLT EFVEL+ GP SA F+ FR
Sbjct:  529 IAFRERWSEKQDRLRSQSAHGSLPGWRLVPVIIKSNDDLRQEQLAAQLIAQCHKIFQEAQLPLK--LRPYAVLATSATCGLIEAVPDTVSLDSLKKNDPNYTTLSDFYERYFGPRDGSRFKRARRHFVESLAAYSIVCYIFQIKDRHNGNILVDAEGHLIHIDFGFLFTNSPGGNIGFESAPFKLTDEFVELLDGPRSALFRHFR 731
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: W7TUE8_9STRA (Phosphatidylinositol 4-kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUE8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 5.070e-76
Identity = 133/209 (63.64%), Postives = 157/209 (75.12%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFG---PAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFRE 624
            VIFKERW++KEARLR  S++G    WRL+PVIVKA DDLRQEQ ASQ       +L+Q+ +     +RPY I+ATS D G+IEAIPDTVS+DAL++ND  YTTL DFF R FG   P G     RAR+ F+ESLAA  IV +LLQVKDRHNGNILLDA G VIHIDFGF+LA+SPG N  FE APFKLTAE V+++GGP SA F+ FRE
Sbjct:  388 VIFKERWKEKEARLRGRSEIGHLPGWRLVPVIVKANDDLRQEQFASQLLGQIAHVLRQAEVPV--WVRPYGIIATSFDGGLIEAIPDTVSLDALRRNDPSYTTLPDFFQRFFGARQPDGELALARARQCFLESLAAYSIVCFLLQVKDRHNGNILLDAEGHVIHIDFGFLLASSPG-NVKFERAPFKLTAEMVDVLGGPRSAAFRRFRE 593
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BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Match: A0A3R7JFU2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JFU2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.170e-75
Identity = 127/205 (61.95%), Postives = 154/205 (75.12%), Query Frame = 1 
Query:    7 VIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKNDQQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSSACFQGFR 621
            ++F+ERW +KEAR+RR S  G    WRL+ VIVK+ DDLRQEQ A+Q  A   RI ++  L     LRPY+++ATS   G+IEA+PDTVS+D+LK+ND  YTTLLDF+HR  G   + GF RA+R FVESLAA  IV Y+ Q+KDRHNGNILLD  G VIHIDFGF+L NSPG N+NFE APFKLT EFVELMGGP S+ F+ FR
Sbjct:  660 IVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPL--ALRPYNVIATSAKTGLIEAVPDTVSLDSLKRNDPGYTTLLDFYHRLHGDKNTTGFTRAQRNFVESLAAYSIVCYVFQIKDRHNGNILLDTDGHVIHIDFGFLLTNSPGSNWNFERAPFKLTDEFVELMGGPRSSTFRYFR 862
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10753.716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLV8_ECTSI7.670e-12995.19PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A6H5JBM1_9PHAE3.220e-12795.63PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A7S4DAE3_HETAK1.260e-7964.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9ZTI6_9STRA3.820e-7862.44Phosphatidylinositol kinase (PIK-J) n=1 Tax=Achlya... [more]
A0A1V9Z3H6_9STRA1.000e-7762.44Phosphatidylinositol kinase (PIK-J) n=1 Tax=Thraus... [more]
A0A2D4BTD9_PYTIN1.410e-7762.93Phosphatidylinositol 3 and 4-kinase-like protein n... [more]
T0QYL2_SAPDV1.670e-7761.95PI3K/PI4K catalytic domain-containing protein n=2 ... [more]
A0A6G0XDX5_9STRA7.890e-7760.98Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W7TUE8_9STRA5.070e-7663.64Phosphatidylinositol 4-kinase n=1 Tax=Nannochlorop... [more]
A0A3R7JFU2_9STRA1.170e-7561.95Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10753contigH-canaliculatus_F_contig10753:1469..4202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score399.4
Seed ortholog evalue1e-108
Seed eggNOG ortholog2880.D8LLV8
Preferred namePI4KB
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size630
Cds size630
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10753.716.1prot_H-canaliculatus_F_contig10753.716.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10753 1469..4202 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928739.44903-CDS-H-canaliculatus_F_contig10753:1468..15601622928739.44903-CDS-H-canaliculatus_F_contig10753:1468..1560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 1469..1560 -
1696845545.7406144-CDS-H-canaliculatus_F_contig10753:1468..15601696845545.7406144-CDS-H-canaliculatus_F_contig10753:1468..1560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 1469..1560 -
1622928739.4743392-CDS-H-canaliculatus_F_contig10753:2023..21291622928739.4743392-CDS-H-canaliculatus_F_contig10753:2023..2129Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 2024..2129 -
1696845545.751739-CDS-H-canaliculatus_F_contig10753:2023..21291696845545.751739-CDS-H-canaliculatus_F_contig10753:2023..2129Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 2024..2129 -
1622928739.4884648-CDS-H-canaliculatus_F_contig10753:2493..26311622928739.4884648-CDS-H-canaliculatus_F_contig10753:2493..2631Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 2494..2631 -
1696845545.7599971-CDS-H-canaliculatus_F_contig10753:2493..26311696845545.7599971-CDS-H-canaliculatus_F_contig10753:2493..2631Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 2494..2631 -
1622928739.5003054-CDS-H-canaliculatus_F_contig10753:3200..32851622928739.5003054-CDS-H-canaliculatus_F_contig10753:3200..3285Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 3201..3285 -
1696845545.7681549-CDS-H-canaliculatus_F_contig10753:3200..32851696845545.7681549-CDS-H-canaliculatus_F_contig10753:3200..3285Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 3201..3285 -
1622928739.522968-CDS-H-canaliculatus_F_contig10753:3745..38511622928739.522968-CDS-H-canaliculatus_F_contig10753:3745..3851Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 3746..3851 -
1696845545.7762218-CDS-H-canaliculatus_F_contig10753:3745..38511696845545.7762218-CDS-H-canaliculatus_F_contig10753:3745..3851Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 3746..3851 -
1622928739.552224-CDS-H-canaliculatus_F_contig10753:4099..42021622928739.552224-CDS-H-canaliculatus_F_contig10753:4099..4202Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 4100..4202 -
1696845545.7864282-CDS-H-canaliculatus_F_contig10753:4099..42021696845545.7864282-CDS-H-canaliculatus_F_contig10753:4099..4202Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10753 4100..4202 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10753.716.1

>prot_H-canaliculatus_F_contig10753.716.1 ID=prot_H-canaliculatus_F_contig10753.716.1|Name=mRNA_H-canaliculatus_F_contig10753.716.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=210bp
TQVIFKERWRQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQF
FALAHRILKQSPLRARAGLRPYDIVATSHDAGVIEAIPDTVSIDALKKND
QQYTTLLDFFHRHFGPAGSEGFQRARRYFVESLAANCIVTYLLQVKDRHN
GNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVELMGGPSS
ACFQGFREAS
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mRNA from alignment at H-canaliculatus_F_contig10753:1469..4202-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10753.716.1 ID=mRNA_H-canaliculatus_F_contig10753.716.1|Name=mRNA_H-canaliculatus_F_contig10753.716.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2734bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10753:1469..4202- (Hapterophycus canaliculatus Oshoro5f female)
ACCCAGGTGATCTTCAAGGAGCGGTGGCGTCAGAAAGAGGCGCGACTGAG
AAGGGCGTCCAAGCTGGGTCAGGCGAGAGAGTGGAGGCTCATGCCTGTGA
TCGGTGAGGGGGAAGACGGCAGTGCCGATCAAAATCGATCAATATCATGC
GGAGTCGGGTCGGGGCACAGAGGGCCACGTTTTCGGCCTTGCCGCGCCTT
GTCGCATTTTGGTTGCTGCGTTGGGTGGTTGGAATCGCTTCTACTGCCGT
CGCCGCCGCTGCTGCTGTTCCGTGCGTCCATCCTGCCATCTGTGTTGTTC
GTCCCTCGTCCTTCCGTGTCCCGTTCCGTGTGAATCGTCTCGTGTGCGTA
GTCAAGGCCGGCGACGACCTGCGGCAGGAGCAGCTAGCCTCGCAGTTCTT
CGCCCTGGCGCACCGAATCCTCAAGCAGAGCCCCCTCCGCGCACGAGCGG
GACTCAGGTGACCACGACCAGGCCAGAAGGCCATCCCGTCCGGTGGGAAC
AGCGTGCCCCATCACCCGTATCCAAGACATGTACACAGCCTTCATTCTCG
CGGGAAGTGGTGTGTGCCCCTGAGGGGCTTAGGGTTTCGCGTCGTGTCCG
CGAGCCGAGTTCACTGCCCTTCCCACGGATGGCGTCGCCGACCCGCTGCT
GCCGACCGGCACCTCTACGGTACTCTCCCCTCTCTCCCGGCCGTGAAAGA
CGGAGCGTGCGGGGATCCGCGGCCTCCGTAGCTCGTGGAACACCCGCTTG
CTTTCCCCCGCTCCCGCTTTCCTCGCCCCACGCCTCTGTCCGTCCGTCCG
TCCCCTGGCCCGTTCCCGGGGAAACCGTCTGGGGTGTTCCCTGTGCGTGA
CGGCCGTGGGAATGCCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCGC
CACGCCCTCTAAACCAGGCCCTACGACATCGTCGCGACGTCGCACGATGC
GGGGGTGATCGAGGCCATTCCTGACACGGTCTCGATCGATGCTCTCAAAA
AGGTGCGGCGGTCGAGCTGTTTTTGTCGCTGTTTTTGTCCTCCTCATCGT
TGTTGGCGGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGTG
TCGGCCTGGAGTGAGCAAGAGAGGGGCGAACAGCGCGTCGTACATCGGTT
GGTTGTCGCGTTTGCTCAGTGTGGCGTGCAGCAGGAGCTCGGACATGTGG
ACTCTCCCGTGGTTCTTTCTCGAGTGTGACCAAGCGCCTCTTGTGTGCAC
AAGCGCTCGGGCGCTGCACTCGCACGATTGACCGGAATGACGAAGCACAA
GAGGTCCGGCTGAGACGAAGATGGCGCCCAAAGCGTTGCCTTTCCGTGGC
GGCTTCGATAGTCCGCCCTTTTTTTTTCTCAACCCGTTCTATCAGCGGCA
GCTCTTCGGCGATCGCGCGAAGTCGCGTGAACTGCTGATTGTTTCACGTG
CTGACTGGCGTTCGCGTAGAGATATAATCGGCATCTATCAACTACATACT
TTTCCATTAGAGCGCAATCTCCTCGTTCGTTAGTGACGCCCCATCTCTTC
GTCACCGGCGTTGTCGCGCAGAACGACCAGCAGTACACCACGCTGTTGGA
CTTCTTCCACCGGCACTTCGGGCCTGCCGGATCGGAGGGCTTCCAGCGCG
CGAGGCGTTATTTCGTCGAGTCTCTGGCCGCCAACTGCATCGTGACGTAC
CTTCTGCAGGTGAGGAGAAGCTGGAGGCATCTCAACTGTTCGGGGAGACG
CACCTGAGCACGTTGCGTTTTTGGCATACCGCCCGTGCCGTGCGTGCATT
GTGTTCCGTCTTTGCTTTTTGGGGGGGGCGTTCCGTAGCGCGACGAAGCG
GTTTTGAATTTGAAAAAGGTAGGTCCGTTTTACTGCCTCCTGTACGGTGA
TGGTCATGTTCGAATGTTCACCACGCTGTTTCTACAGGTGTGGGCCTCCG
TCCTCTCCCAAACTATGTATTCTTGTTGTTCGTGCTTGTTAACCCTTACG
CTCTGCGTGCTTCGTGGTGTGGCGATCGGTGTCTCTTATACTTGAAATCG
CTTCTCCTCCGCGGCGTTGTTAGGTTAAAGATCGCCACAACGGGAACATC
CTGCTCGACGCTCGCGGGCGCGTCATCCACATTGACTTCGGCTTCATGCT
GGCCAACAGCCCGGGCGGGAACTTCAACTGTGAGAGAGGGCATATGGCGA
GAGAGAGAGAGAGAAAGAAAGAAAGAGAGAGAGAACGGTGTAGCTGATGG
CATGACTGAGGCATGACTGTCGCGATACTCCAGGCACGCGTCTGCCGCCG
ACCTCCGAGATCGTCAATTCTTTATTTTCGTCTGTCTTTGTGGCCCCTCG
AGTCCAAAATCTCGTCGTCGCAGATACACCCGCGTGTTGCCGTTATTTTT
TCATTTTTTCTGGTAGCGCCCGAGGCCGTCGATTGATTTGCCGTGACAGG
GCCTTGGATATCTGAGTTTTTATGGTATATTCTCGCCTCTCTACCCTTTT
TTATAGAACAAGTCAACAACACCTCTACCCTTTCTTGGTGTTGGTGTATT
GACCCTCCCTGCCGCCGGGCTATACTTGCTGCCACCTCCCCCAAAACTCC
GGCCTAAATACCTGTGAATTCCGTTTTTTTGTCCCTGTTCAGTCGAATCT
GCGCCGTTCAAGCTCACGGCCGAATTTGTAGAGCTTATGGGCGGGCCAAG
TTCTGCATGCTTCCAGGGTTTCCGAGAGGCGAGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10753:1469..4202-

>mRNA_H-canaliculatus_F_contig10753.716.1 ID=mRNA_H-canaliculatus_F_contig10753.716.1|Name=mRNA_H-canaliculatus_F_contig10753.716.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1260bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10753:1469..4202- (Hapterophycus canaliculatus Oshoro5f female)
ACCCAGGTGATCTTCAAGGAGCGGTGGCGTCAGAAAGAGGCGCGACTGAG
AAGGGCGTCCAAGCTGGGTCAGGCGAGAGAGTGGAGGCTCATGCCTGTGA
TCGACCCAGGTGATCTTCAAGGAGCGGTGGCGTCAGAAAGAGGCGCGACT
GAGAAGGGCGTCCAAGCTGGGTCAGGCGAGAGAGTGGAGGCTCATGCCTG
TGATCGTCAAGGCCGGCGACGACCTGCGGCAGGAGCAGCTAGCCTCGCAG
TTCTTCGCCCTGGCGCACCGAATCCTCAAGCAGAGCCCCCTCCGCGCACG
AGCGGGACTCAGTCAAGGCCGGCGACGACCTGCGGCAGGAGCAGCTAGCC
TCGCAGTTCTTCGCCCTGGCGCACCGAATCCTCAAGCAGAGCCCCCTCCG
CGCACGAGCGGGACTCAGGCCCTACGACATCGTCGCGACGTCGCACGATG
CGGGGGTGATCGAGGCCATTCCTGACACGGTCTCGATCGATGCTCTCAAA
AAGGCCCTACGACATCGTCGCGACGTCGCACGATGCGGGGGTGATCGAGG
CCATTCCTGACACGGTCTCGATCGATGCTCTCAAAAAGAACGACCAGCAG
TACACCACGCTGTTGGACTTCTTCCACCGGCACTTCGGGCCTGCCGGATC
GGAGGGCTTCCAGCGCGCGAGGCGTTATTTCGTCGAGTCTCTGGCCGCCA
ACTGCATCGTGACGTACCTTCTGCAGAACGACCAGCAGTACACCACGCTG
TTGGACTTCTTCCACCGGCACTTCGGGCCTGCCGGATCGGAGGGCTTCCA
GCGCGCGAGGCGTTATTTCGTCGAGTCTCTGGCCGCCAACTGCATCGTGA
CGTACCTTCTGCAGGTTAAAGATCGCCACAACGGGAACATCCTGCTCGAC
GCTCGCGGGCGCGTCATCCACATTGACTTCGGCTTCATGCTGGCCAACAG
CCCGGGCGGGAACTTCAACTGTTAAAGATCGCCACAACGGGAACATCCTG
CTCGACGCTCGCGGGCGCGTCATCCACATTGACTTCGGCTTCATGCTGGC
CAACAGCCCGGGCGGGAACTTCAACTTCGAATCTGCGCCGTTCAAGCTCA
CGGCCGAATTTGTAGAGCTTATGGGCGGGCCAAGTTCTGCATGCTTCCAG
GGTTTCCGAGAGGCGAGTTCGAATCTGCGCCGTTCAAGCTCACGGCCGAA
TTTGTAGAGCTTATGGGCGGGCCAAGTTCTGCATGCTTCCAGGGTTTCCG
AGAGGCGAGT
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