mRNA_H-canaliculatus_F_contig10730.704.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: UPI001CDB8C50 (uncharacterized protein LOC122853856 n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDB8C50) HSP 1 Score: 55.5 bits (132), Expect = 3.530e-7 Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRFL-RVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLSL 225
W+FDSGAS H++ + TN + ++ L RV G +L +G + + +G+ V++ L NV F+P L YNL S+
Sbjct: 289 WLFDSGASYHMSGRKEWFTNMVKKEKSLIRVGDGKVLETNLYGTINISVFNGESWVKMSLNNVLFIPELKYNLFSM 364
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: A0A2K3LCP3_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LCP3_TRIPR) HSP 1 Score: 50.8 bits (120), Expect = 5.200e-6 Identity = 25/76 (32.89%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRF-LRVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLSL 225
W DSG S H+TP+ + LT+F ++ +++A L EG ++ + ++G +V++ +V +VP++NYNL+S+
Sbjct: 49 WFLDSGCSNHMTPHREWLTSFDASRKTSIKLADSRKLAAEGTYNIVIRGKTGN---KVIVEDVFYVPKMNYNLMSI 121
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: K1VLE6_TRIAC (Uncharacterized protein n=1 Tax=Trichosporon asahii var. asahii (strain CBS 8904) TaxID=1220162 RepID=K1VLE6_TRIAC) HSP 1 Score: 50.8 bits (120), Expect = 1.580e-5 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRFLRV--ASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLS 222
WIFDSGAS H+T N L + R + V ASG LP+ G +T+ G G+VR L +V +VP L YNL S
Sbjct: 395 WIFDSGASSHMTGNIALLKDSRPVSMGMSVSVASGDSLPVHSSGTVTLRNLDG-GLVR--LTDVLYVPGLTYNLCS 467
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: A0A4Y1ZP29_ARAVE (gag_pre-integrs domain-containing protein (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZP29_ARAVE) HSP 1 Score: 49.7 bits (117), Expect = 3.910e-5 Identity = 26/76 (34.21%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRF-LRVASGSLL-PIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLS 222
WIFD+ A+ H + + D + N+R + + VA G + P+EG G++ ++F + LLNV + P+L NL+S
Sbjct: 280 WIFDTAATSHFSCDKDSMLNYRPVKGAEVSVAIGGVTCPVEGTGEVELEFYKNGECETITLLNVLYSPKLKQNLIS 355
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: A0A4Y2NTP2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=9 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NTP2_ARAVE) HSP 1 Score: 49.7 bits (117), Expect = 4.010e-5 Identity = 26/76 (34.21%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRF-LRVASGSLL-PIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLS 222
WIFD+ A+ H + + D + N+R + + VA G + P+EG G++ ++F + LLNV + P+L NL+S
Sbjct: 280 WIFDTAATSHFSCDKDSMLNYRPVKGAEVSVAIGGVTCPVEGTGEVELEFYKNGECETITLLNVLYSPKLKQNLIS 355
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: A0A026WX30_OOCBI (Copia protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WX30_OOCBI) HSP 1 Score: 49.3 bits (116), Expect = 5.380e-5 Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRFLRVASGSLLPIEGHGDLTVDFQSGQGVVRVVLLNVAFVPRLNYNLLS 222
W DSGAS H+TP + LT+F++ ++ + + G+ + G GD+ ++ G+ VL V +VP L NL S
Sbjct: 145 WYLDSGASEHMTPRKEWLTDFKRIKKPVTIG-GTTIDATGIGDIKLETFDGKKWKPCVLKKVLYVPNLKLNLFS 217
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Match: A0A1W7R600_AEDAL (Putative copia-8 aa-i (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R600_AEDAL) HSP 1 Score: 48.5 bits (114), Expect = 9.860e-5 Identity = 29/75 (38.67%), Postives = 39/75 (52.00%), Query Frame = 1
Query: 1 WIFDSGASGHVTPNADHLTNFRQCQRFLRVASGSLLPIEGHGDLTVDFQSGQG-VVRVVLLNVAFVPRLNYNLLS 222
WIFDSGAS H+T N T F + + +A G L G G + QS G ++ V + V +VP L NL+S
Sbjct: 284 WIFDSGASRHMTSNKRCFTCFSGQRETVHLADGRKLLSLGFGTAIIRSQSADGEIISVKMKEVLYVPNLRSNLIS 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10730.704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10730.704.1 >prot_H-canaliculatus_F_contig10730.704.1 ID=prot_H-canaliculatus_F_contig10730.704.1|Name=mRNA_H-canaliculatus_F_contig10730.704.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=75bp WIFDSGASGHVTPNADHLTNFRQCQRFLRVASGSLLPIEGHGDLTVDFQSback to top mRNA from alignment at H-canaliculatus_F_contig10730:4451..4675- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10730.704.1 ID=mRNA_H-canaliculatus_F_contig10730.704.1|Name=mRNA_H-canaliculatus_F_contig10730.704.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=225bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10730:4451..4675- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10730:4451..4675- >mRNA_H-canaliculatus_F_contig10730.704.1 ID=mRNA_H-canaliculatus_F_contig10730.704.1|Name=mRNA_H-canaliculatus_F_contig10730.704.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=450bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10730:4451..4675- (Hapterophycus canaliculatus Oshoro5f female)back to top |