mRNA_H-canaliculatus_F_contig107.670.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: D7FWX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX5_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 6.760e-153 Identity = 236/252 (93.65%), Postives = 245/252 (97.22%), Query Frame = 1 Query: 109 ASCLVLVGLAG-AARAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTRVDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQV 861 A+CL+ +GLAG AA AASDSVS+YHMSCHGVYNKIARQAMGDIKELQTRVD+GEACPALGEKADSICNQALEQFSTDAADTENDP KESIFDEKVEELETSLDLPLQLVYMKQL LLREKALQRYKTLAKGSETSDYQAMVAADQWF+KEAEASTRAGSSWEFSAVRNSLQTAMNEMAQR KKATDA+VRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPD+NINLS TYQQGKANLQ+ Sbjct: 3 ATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACPALGEKADSICNQALEQFSTDAADTENDPTKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQM 254
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A835YIM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM6_9STRA) HSP 1 Score: 294 bits (753), Expect = 6.090e-95 Identity = 160/260 (61.54%), Postives = 198/260 (76.15%), Query Frame = 1 Query: 91 MRIMRAASCLVLVGLAGAARAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTRVDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 M++ R A L LAG A AAS + Y ++CH V+ K+ AM DI L+++V+ GE CP LG KAD+ICNQALEQFS++A D END A ESIFDEKVEELE +LD+PLQ+VY++QLAL+REKALQRYK AKGSETSDYQAM+AADQ++ KEAE+STR GS W+++ R+SLQ+ MNE+AQRSKKA DA+++AAQQ STAMQ+ QLYGG SPWNFG AYRIPDT+INLS YQQG+AN+Q+ V Sbjct: 1 MQMARLALGLAAAALAGTAAAASANPDMYSLTCHKVFCKVTASAMKDIDALKSKVEGGELCPGLGAKADAICNQALEQFSSEAPDAENDDALESIFDEKVEELEKTLDMPLQMVYLRQLALIREKALQRYKAAAKGSETSDYQAMIAADQFYAKEAESSTRQGSGWDYARERSSLQSTMNELAQRSKKAADAAIKAAQQQSTAMQFXXXXXXXXXXXXQQLYGGS-SPWNFGVAYRIPDTHINLSGNYQQGRANVQMSCV 259
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A6V2EIW0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EIW0_9STRA) HSP 1 Score: 219 bits (557), Expect = 2.870e-65 Identity = 118/235 (50.21%), Postives = 163/235 (69.36%), Query Frame = 1 Query: 169 SSYHMSCHGVYNKIARQAMGDIKELQTRV-DAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 + Y C V +I +A I++++ + D G+ P G KAD+ICNQALE+F+ +A D +D + +D K+EELE +LD PLQ++Y++QLA++REKALQ Y+ ++ SE+SDY+AM+ AD F +EAE +TR GS W+++ R+ LQ+ MN+MAQ SKK D +++A Q STAMQYLQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL +YQQG+ N Q+ V Sbjct: 40 TDYASLCESVKCQIVEKASQSIEDMRRMIMDEGQTAPEFGAKADAICNQALEEFAQNAPDAGDDALAAATYDRKLEELEAALDAPLQVLYLRQLAIVREKALQSYRASSRSSESSDYEAMLQADSMFQREAEEATREGSDWDYATERSYLQSVMNDMAQTSKKLIDVQMKSANQQSTAMQYLQQQQQMIQQLQMQLYG-QSSPWNVGLAYRIPDTNFNLQGSYQQGRGNFQLSCV 273
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: B8CCD1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCD1_THAPS) HSP 1 Score: 209 bits (532), Expect = 4.840e-62 Identity = 123/242 (50.83%), Postives = 166/242 (68.60%), Query Frame = 1 Query: 148 RAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTR-VDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 R AS SVS H+ I+ A I+E + + VD G A P G KAD IC+QA+E+F+ A +D S + K+EELE+SLD PLQ++Y++QL+LLRE+AL Y++ +K S+ SDY+AM+AAD F++ AE+STR S+W + A R+ LQT M+E AQ +KK T+ V+++QQ STAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL +YQQG+AN+Q+ V Sbjct: 2 RVASLSVSIIHL--------ISYAAHVQIEEARRKIVDEGTAIPDFGAKADEICSQAIEEFARSAPSPSDDNTASSAYARKLEELESSLDAPLQVLYLRQLSLLREQALSSYRSASKASDASDYEAMLAADAQFLRAAESSTRKASTWTYDAERSHLQTVMSEFAQTTKKLTETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCV 234
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: W7TWU4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWU4_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.030e-60 Identity = 123/253 (48.62%), Postives = 160/253 (63.24%), Query Frame = 1 Query: 100 MRAASCLVLVGLAGAARAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTRVDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQ 858 MR +V+V + G DS Y + C + K + A +I+ L+ V G+ G +AD ICN AL F+ +A D + DP K I D++VEELE SLD PL +++++QL LR+KALQRYKT AKG+ETSDY+AM AAD +F EAEA RAGS W+++A R SLQ MN +AQ++KK D +AAQ M LQ Q Q+ LQN L GG SP NFG +YRIPDTNIN+ T+QQGK N+Q Sbjct: 73 MRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQXQSQMMQLQNALGGG--SPLNFGLSYRIPDTNINVQYTFQQGKTNVQ 323
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A7R9WU24_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WU24_9STRA) HSP 1 Score: 200 bits (509), Expect = 4.430e-58 Identity = 114/242 (47.11%), Postives = 159/242 (65.70%), Query Frame = 1 Query: 148 RAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTR-VDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 R +++ S Y GV ++ A G I+ L+++ V+ G G +AD+ICN+ALE F+ A D +DP + +D+K+E+LE +LD PLQ++Y++QLALLRE ALQRY+ +K S S+Y+AM+ AD F ++AE STR GS W+F+A R+ LQ MN +A+ KKA D V++AQQ T M +L + LQ QLYG Q SPWN G AYRIPDTN NL +YQQG+AN+Q+ V Sbjct: 35 RGGANAASGYATELEGVKLQVLDAATGSIESLRSKIVNEGTIIDGFGGQADTICNKALEDFAKSAPDAGDDPTAAAEYDKKLEQLEAALDAPLQVLYLRQLALLRENALQRYRAASKTSGASEYEAMLQADGLFTRQAEDSTREGSDWDFTAERSYLQAVMNNIAESGKKAVDVQVKSAQQQQTTMAFLXXXXXTIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCV 275
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A7S4J3B5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3B5_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.190e-57 Identity = 114/236 (48.31%), Postives = 154/236 (65.25%), Query Frame = 1 Query: 166 VSSYHMSCHGVYNKIARQAMGDIKELQTRV-DAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 +S Y C V + + +A I L+ V D G GEKAD ICN+ALE+F+ A D + D + S ++ K+EELE LD LQ++Y++QLALLREKALQ Y+ + +E SDY+AM+ AD F++ AE STR GS W+FS+ R+ LQ+ MN++AQ KK D ++A ++ + MQ LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN N+ +YQQG+ NLQ+ V Sbjct: 37 ISEYSNLCDTVKSSVVEKASQSIDGLRRSVVDEGAIVSEYGEKADEICNKALEEFAKSALDAQGDSSAASTYERKLEELEAVLDASLQVIYLRQLALLREKALQTYRANTRVTEASDYEAMLQADSQFVRGAEESTRKGSDWDFSSERSYLQSVMNDVAQTRKKLIDVQMKATEKQNVIMQVLQQQQQIIQQLQMQLYG-QTSPWNVGMAYRIPDTNFNVQGSYQQGRTNLQLSCV 271
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A7S2XTT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTT6_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.560e-56 Identity = 114/237 (48.10%), Postives = 154/237 (64.98%), Query Frame = 1 Query: 163 SVSSYHMSCHGVYNKIARQAMGDIKELQ-TRVDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 + S Y + C V ++I +A I EL+ T VD A G KADSICNQALE+F+ +A D +D + +D K+EELE +LD PLQ+++++QLAL+R+KALQ Y+ A+ +ETSDY+AM+ AD F +EAE + R+ ++W+FS+ R LQ M E AQ SKK D ++++QQ STAMQY LQ QLYG Q SPWN G AYRIPDTN NL YQQG+ + + V Sbjct: 38 AASEYGLQCEAVKSRIIEKANEAIDELRRTIVDQSTAAAEFGAKADSICNQALEEFALNAPDAGDDALAAAEYDRKLEELEAALDSPLQILFLRQLALIRDKALQNYRAAARTTETSDYEAMLQADTLFTREAEEAVRSEAAWDFSSERAHLQAVMFENAQTSKKLIDVQMKSSQQQSTAMQYXXXXXXXXXXLQQQLYG-QTSPWNVGLAYRIPDTNFNLQGNYQQGRGTVSLSCV 273
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A7S3P9Q4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9Q4_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.170e-54 Identity = 111/242 (45.87%), Postives = 155/242 (64.05%), Query Frame = 1 Query: 148 RAASDSVSSYHMSCHGVYNKIARQAMGDIKELQTR-VDAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 R SD Y GV + + I+EL+ V+ G+ G KA+ ICN+ALE F+ A D +D + S +D K++ELE ++D PL ++Y+KQLA LR+ ALQR++ K S +SDY+AM+ AD F++EAEA++R GS W+F++ R+ LQ M +A+ S+K + + AQQ T MQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL +YQQG+AN+Q+ V Sbjct: 37 RGGSDG--DYASQLEGVKSAVLASVSTSIEELRREIVEGGKVVEDFGAKAEVICNKALEDFAASAPDAGDDDSGASTYDRKMQELEAAVDAPLHVLYLKQLAFLRDTALQRFRASLKTSGSSDYEAMLQADAQFVREAEAASREGSDWDFASERSFLQAVMGNIAESSRKTMEVQMNNAQQQQTTMQFLQSQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCV 275
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Match: A0A7R9W768_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W768_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.740e-54 Identity = 109/235 (46.38%), Postives = 151/235 (64.26%), Query Frame = 1 Query: 169 SSYHMSCHGVYNKIARQAMGDIKELQTRV-DAGEACPALGEKADSICNQALEQFSTDAADTENDPAKESIFDEKVEELETSLDLPLQLVYMKQLALLREKALQRYKTLAKGSETSDYQAMVAADQWFMKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRSKKATDASVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDTNINLSATYQQGKANLQVGPV 870 S Y C + + +A I + + V D G + GEK+D IC +ALE+F+ +A D +D S +D K+EELE LD LQ++Y++QLALLRE+ALQ Y+ + +E SDY+AM+ AD F++ AE +TR GS W+FS+ R+ LQ+ MN++AQ KK D ++A ++ + +Q LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL YQQG+ NLQ+ V Sbjct: 32 SDYASLCEATKSSVIEKASQSIDDFRRSVVDEGTILSSFGEKSDDICQKALEEFAKNAPDAGDDSLAASTYDRKLEELEAVLDASLQVIYLRQLALLREEALQTYRANTRVTEASDYEAMLQADSQFVRGAEEATRKGSDWDFSSERSYLQSVMNDVAQTRKKLIDVQMKATEKQNVILQVLQQQQQIIQQLQMQLYG-QTSPWNVGMAYRIPDTNFNLQGQYQQGRTNLQLSCV 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig107.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig107.670.1 >prot_H-canaliculatus_F_contig107.670.1 ID=prot_H-canaliculatus_F_contig107.670.1|Name=mRNA_H-canaliculatus_F_contig107.670.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=355bp MRIMRAASCLVLVGLAGAARAASDSVSSYHMSCHGVYNKIARQAMGDIKEback to top mRNA from alignment at H-canaliculatus_F_contig107:39510..46375- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig107.670.1 ID=mRNA_H-canaliculatus_F_contig107.670.1|Name=mRNA_H-canaliculatus_F_contig107.670.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6866bp|location=Sequence derived from alignment at H-canaliculatus_F_contig107:39510..46375- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig107:39510..46375- >mRNA_H-canaliculatus_F_contig107.670.1 ID=mRNA_H-canaliculatus_F_contig107.670.1|Name=mRNA_H-canaliculatus_F_contig107.670.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2130bp|location=Sequence derived from alignment at H-canaliculatus_F_contig107:39510..46375- (Hapterophycus canaliculatus Oshoro5f female)back to top |