mRNA_H-canaliculatus_F_contig1069.662.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1069.662.1 vs. uniprot
Match: D8LNZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ7_ECTSI) HSP 1 Score: 615 bits (1586), Expect = 2.340e-203 Identity = 430/747 (57.56%), Postives = 505/747 (67.60%), Query Frame = 1 Query: 19 MFSPGVLRQLDKENVVNTPARTPDRRRNNLGSA------SAARSTGFKVFEGDGEVSTRPSISKKERPEASQLAADISHAKAEATRFKQAAIQAQRALGERNELVQQLEASKASTKQRYTALLHSHEEANKELALLRTQQL--SNDASGGDIERLKATIENLETNNELLREERGSLQTRLAKRDAAVADMKADLXXXXXXXXXXXXXXXXXXXXXDTASREAEALAAGNGAQARWSLEKAALDARVSEVETLAESAGGRCVALTAERDLLAEELARREKEHGATVSALQEEMQGLHRRTAADLGDWRQRYRQEVGAKKAVQGQLERLVGASESVASVFEKHAVVEASLQEAYGLLSQAVIAEENRDGGGRGGEGGDSSPAASRVVEGVLEHILGRVFEAAASGAEGEE-------RKEREAVRELNQEASDNLGEELEKLTADMEALRNFGLDDANTFLEQAKSLESELAIVREQHAASASALEASRKQSEQEVERLTAALNQGRGEKEELKRRLETAANELAINVELSEQAIAASVTAGQQELRDAEARRAAEEERRVEELEAQNKKRREELESERRAYAKKXXXXXXXXXXXXXXXXXXXAQASALKARAAASGREAASPSPRPPVRTTASTQRREAKEQQLEEMEARLSTVVAENRELERKIESVAAGSQQPGPEGKERRAKLLALEAEVALLRESVSKERELTARAKEAEMLMKKYALRHNIIAEKKVKDLQRRLANATKPVA 2214 +FSPGVL+QLDKENVVNTPARTPDRRR LGSA +AA GFKVF+ GE STR S++ +E ASQLA D+S A++E R K+ A QA+RAL ERNE+V+QL+ASKA+TKQRYTALL SHEEANKEL LLRTQ+L S D+ G +E+L+AT+ENLETNNELLREERGSLQTRLAKRDAAV+ MKADL D A+ ++A GAQA+W L+K AL+AR+ E+ET A S+G RCV L AERDLLAEE ARREKEH +TV++L+ EMQGLHRRT ADLGDWRQRYRQEVGAK+A++GQLERLV ASESV V EKHAV+EASLQEAYGLLSQAV+AEE RG A+RVVEGVLEH+LGRVF+A A+ + EE RKEREA R L++EASDNLGEELEKLTADMEALR+FGLD+A+TFLEQAKSLE+EL VRE+HAAS S LEA+R SE+EVERL L +G+GE+EELK RLETAANEL INV RRAYA+K QASALKA+AAA REA SP P V T EAK+Q+LEEMEARLSTVV++N+ELERK+E+V A Q+ +ER+A++ ALEA EAE LMKKYALR++ + EKKVKDLQRRLA AT A Sbjct: 13 LFSPGVLQQLDKENVVNTPARTPDRRRK-LGSAIRGTSSAAAAGVGFKVFQQQGEASTRTSVAGQE---ASQLATDLSRAESELARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKELELLRTQKLDSSGDSGSGIVEQLRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQKADRLREELDAAAAASKA-----GAQAQWDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAKRALEGQLERLVAASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEE------RGXX--XXXXXAARVVEGVLEHLLGRVFQATATSGDEEEEGEDEEGRKEREADRRLSKEASDNLGEELEKLTADMEALRSFGLDEAHTFLEQAKSLETELEAVREKHAASVSDLEAARAHSEREVERLAGMLERGQGEREELKLRLETAANELVINVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAYAQKAEAMEGENRALHEKLEGLATQASALKAKAAA--REATSP---PSVSVTDW----EAKQQELEEMEARLSTVVSKNQELERKVETVKAEGQEASLGSEERQAQVAALEAXXXXXXXXXXXXXXXXXXXXEAEWLMKKYALRNSTLCEKKVKDLQRRLAKATGKAA 733 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1069.662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1069.662.1 >prot_H-canaliculatus_F_contig1069.662.1 ID=prot_H-canaliculatus_F_contig1069.662.1|Name=mRNA_H-canaliculatus_F_contig1069.662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=736bp MFSPGVLRQLDKENVVNTPARTPDRRRNNLGSASAARSTGFKVFEGDGEVback to top mRNA from alignment at H-canaliculatus_F_contig1069:12700..20936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1069.662.1 ID=mRNA_H-canaliculatus_F_contig1069.662.1|Name=mRNA_H-canaliculatus_F_contig1069.662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8237bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1069:12700..20936+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1069:12700..20936+ >mRNA_H-canaliculatus_F_contig1069.662.1 ID=mRNA_H-canaliculatus_F_contig1069.662.1|Name=mRNA_H-canaliculatus_F_contig1069.662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4416bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1069:12700..20936+ (Hapterophycus canaliculatus Oshoro5f female)back to top |