mRNA_H-canaliculatus_F_contig10685.656.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10685.656.1
Unique NamemRNA_H-canaliculatus_F_contig10685.656.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: D8LEW5_ECTSI (GJ12915 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW5_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.660e-143
Identity = 206/233 (88.41%), Postives = 218/233 (93.56%), Query Frame = 1
Query:    1 RVAIHPAVVPTIDDKDKKDLEIDTIDTTPFAMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPDDGEYHDEPFLVLASDGLWDVLSNAEVAFITRR 699
            R+AIH AVVPTIDDKD+KDL+ID+IDTTPFAMFGVFDGHGGPACAEFLTQSVST+LAHSPVLYDEDLTP QRR  ATADSFEELEKVHN WA + GDLSGSTAILSTFQDGVLVMA VGDSA LYVDHMGK HNLCPQHSTSN++EVERVLSMGGTI+NNRVAGCLMPTRTIGDLDCKR LG IVSPHPE+ LAA+YAPPDDGE HDEPFLVLASDGLWDVLS AEVAFITR+
Sbjct:   48 RIAIHQAVVPTIDDKDRKDLDIDSIDTTPFAMFGVFDGHGGPACAEFLTQSVSTVLAHSPVLYDEDLTPTQRRTFATADSFEELEKVHNKWADEIGDLSGSTAILSTFQDGVLVMAGVGDSAGLYVDHMGKQHNLCPQHSTSNEKEVERVLSMGGTIVNNRVAGCLMPTRTIGDLDCKRALGAIVSPHPEITLAAIYAPPDDGEPHDEPFLVLASDGLWDVLSFAEVAFITRK 280          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A6H5KBY9_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY9_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 1.370e-139
Identity = 204/233 (87.55%), Postives = 217/233 (93.13%), Query Frame = 1
Query:    1 RVAIHPAVVPTIDDKDKKDLEIDTIDTTPFAMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPDDGEYHDEPFLVLASDGLWDVLSNAEVAFITRR 699
            R+AIH AVVPTIDD+D+KDL+ID+IDTTPFAMFGVFDGHGGPACAEFLTQSVST+LAHSPVLYDEDLTP QRR  ATADSFEELEKVHN WA + GDLSGSTAILSTFQDGVLVMA VGDSA LYVDHMGK HNLCPQHSTSN++EVERVLSMGGTI+NNRVAGCLMPTRTIGDLDCKR LG IVSPHPE+ LAA+YAPPDDGE HDEPFLVLASDGLWDVLS AEVA ITR+
Sbjct:  166 RIAIHQAVVPTIDDEDRKDLDIDSIDTTPFAMFGVFDGHGGPACAEFLTQSVSTVLAHSPVLYDEDLTPTQRRTFATADSFEELEKVHNTWADEIGDLSGSTAILSTFQDGVLVMAGVGDSAGLYVDHMGKQHNLCPQHSTSNEKEVERVLSMGGTIVNNRVAGCLMPTRTIGDLDCKRALGAIVSPHPEITLAAIYAPPDDGEPHDEPFLVLASDGLWDVLSFAEVASITRK 398          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A835YKF9_9STRA (Phosphatase 2C-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF9_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.270e-28
Identity = 74/208 (35.58%), Postives = 112/208 (53.85%), Query Frame = 1
Query:   94 MFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDE-------DLTPIQR-RARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNL--CPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAV--YAPPDDGEYHDEPFLVLASDGLWDVLSNAEV 681
            +FGVFDGHGG +C+  + + +  L       ++        D T ++R    A  D+F +  +    +A   GD SG+ A++    DGV+V A VGDS A+     G   ++    +H+ SN  EV RVL+ GG  + NR+ GCL+PTR +G++DC +   G++S  P+ Q+  +   APP D        LVLASDGLWD +   +V
Sbjct:   38 LFGVFDGHGGASCSA-MAKRIFPLHFRESQTWESLRGAVPGDATAVERVLVAALEDAFAKTCRQFEAFAEAHGDNSGACALVVAVCDGVVVTANVGDSKAIMYTRDGDKQSVRSTARHNISNPDEVARVLASGGHFVQNRLLGCLLPTRALGNIDCLKLCPGVLSARPQFQVVRLRPLAPPSDAAA-----LVLASDGLWDFVETPQV 239          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.850e-27
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 1
Query:   73 IDTTPFAMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDS-AALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPDDGE--------YHDEPFLVLASDGLWDVLSNAEVAFITRR 699
            +++   + F VFDGHGG  C+++L  ++   L  +     E LT  +R   A   + +  E  + D A K  D SG+  ++  + +G + +A VGD  A LY+       +L   H +    E  R+ + GG +INNR  G L P+R+IGDLD KR   G V+  P ++   +  P    E          + PFL+ ASDGLWDV++   V  +T++
Sbjct:    1 MESKQISCFAVFDGHGGSRCSQWLADNLEEDLRCADSWRQEGLTLPKRLKGALVQALKRAEYKYLDLAFKESDHSGACVVVGLYCEGHVCVANVGDCLAVLYLPGADSHVDLSVAHRSRQPEEARRIEAAGGLVINNRAFGVLEPSRSIGDLDLKRHCRGAVTADPYIREVVIPPPQQPAEGAAKKKPALQEAPFLLFASDGLWDVVAAPVVVDLTKK 218          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A7S3U4N4_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U4N4_9SPIT)

HSP 1 Score: 102 bits (254), Expect = 2.050e-22
Identity = 74/236 (31.36%), Postives = 113/236 (47.88%), Query Frame = 1
Query:   19 AVVPTIDDKDKKDLEIDTIDTTPF---------AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPDDGEYHDEPFLVLASDGLWDVLSNAEVAFITRR 699
            A+ P ++D     L +++ D  P          A FGV+DGHGG  CA      +  LLA  PVL+  +  P+     A A SF   E+   D   KSGD SG+ A+ +  +   L ++ VGD  A+ +        L     +++  E +R+ ++GG II+ RV G L+P+RT+GD   K   GG         ++    P          +LV+ SDGL+DVL+N  +A +  R
Sbjct:   41 AIRPNVNDDLASHLVVESADAPPVPEGAVPPRNAFFGVYDGHGGSDCANLAAGRIHMLLAEDPVLWRFE--PLS----ALAASFALAEQEMRDNYAKSGDRSGTCALAALLRGSRLHISWVGDCRAVLISDEATYTQLTVDQRSTDSEEQKRIKAVGGEIIDGRVWGALIPSRTLGDFPWKDRDGGKALTSEPATVSIEITP-------SHKYLVIGSDGLFDVLTNKTIAKLIGR 263          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A3P8AY98_HELPZ (PPM-type phosphatase domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A3P8AY98_HELPZ)

HSP 1 Score: 100 bits (249), Expect = 5.490e-22
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 1
Query:   91 AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPD---DGEYHDEPFLVLASDGLWDVLSNAEVAFITR 696
            A F V+DGHGGP  ++F     + +  H  +L  ED         A    F  L++          D+SG+TA++   +D V+  A VGDS A+ V   G+   L   H  +N++E +R+L+ GG +  NRV G L  +R +GD   KR      +  PE Q+   Y  PD   +    D  F+VLA DG+WDVLSN EV    R
Sbjct:   53 AFFAVYDGHGGPKASQF-----AGINLHKQILQQEDYAQ-GNLPEALRKGFLALDEQMRSDDEMRDDVSGATAVVVLIKDDVIHCANVGDSRAV-VSVCGEARPLSFDHKPANEKEAKRILAAGGWVEFNRVNGNLALSRALGDFVFKRN----EAIPPEQQIVTAY--PDVITENVTEDHEFVVLACDGIWDVLSNQEVVDFVR 244          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A2G9UXN3_TELCI (Protein phosphatase 2C n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9UXN3_TELCI)

HSP 1 Score: 100 bits (250), Expect = 9.570e-22
Identity = 72/205 (35.12%), Postives = 102/205 (49.76%), Query Frame = 1
Query:   91 AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPD---DGEYHDEPFLVLASDGLWDVLSNAEVAFITR 696
            A F V+DGHGGP  ++F     + +  H  +L  ED         A    F  L++          D+SG+TA++   +D V+  A VGDS A+ V   G+   L   H  +N++E +R+L+ GG +  NRV G L  +R +GD   KR      +  PE Q+   Y  PD   +    D  F+VLA DG+WDVLSN EV    R
Sbjct:   18 AFFAVYDGHGGPKASQF-----AGINLHKQILQQEDYAQ-GNLPEALRKGFLALDEQMRSDDEMRDDVSGATAVVVLIKDDVIHCANVGDSRAV-VSVCGEARPLSYDHKPANEKEAKRILAAGGWVEFNRVNGNLALSRALGDFVFKRN----EAIPPEQQIVTAY--PDVITENVTEDHEFVVLACDGIWDVLSNQEVVDFVR 209          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: UPI000C76A109 (probable protein phosphatase 2C T23F11.1 isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76A109)

HSP 1 Score: 99.8 bits (247), Expect = 1.420e-21
Identity = 69/202 (34.16%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   91 AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGG-----IVSPHPELQLAAVYAPPDDGEYHDEPFLVLASDGLWDVLSNAEV 681
            A F V+DGHGG   A +L   +   +       + D+     +     DS  EL+   N     + +L+GSTA     + G +++A +GDS A+     G    +   H+TSN RE ERV +MGG I +NRV G L+PTR+ GD   K E        ++SP P+++   + +  D        FLVLASDG+WD +SN ++
Sbjct:   75 AFFAVYDGHGGTGVANYLKDHLHQFILSQAEYREGDIPEAILKGFLAVDS--ELKTYGN-----ATELTGSTATCVLIKHGDILVANLGDSRAV-ASVGGLVKQITQDHNTSNPRERERVTAMGGVIKDNRVGGVLIPTRSFGDFLLKSEPDKPPWKQVISPVPQIEEFKINSGWD--------FLVLASDGVWDAMSNQDI 260          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: D0NAE7_PHYIT (Protein kinase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NAE7_PHYIT)

HSP 1 Score: 102 bits (254), Expect = 2.640e-21
Identity = 80/229 (34.93%), Postives = 106/229 (46.29%), Query Frame = 1
Query:   91 AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSGSTAILSTFQDG-----VLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHP------------------ELQLAAVYAPPDDGEYH----DEPFLVLASDGLWDVLSNAEVAFITR 696
            A  G++DGHGG  CA  L   + T +  SP   D  LT      ++  D FE L+    D+     DLSGSTA     + G     VL +A VGD   +     G T  L   H  + + E ERV+  GG ++NNRV G +  TR  GDL+ K    G+++ HP                  E   A + A PD  E      D+ FL+LA DGLWDVL++ E   I R
Sbjct:  636 AFIGIYDGHGGEECANILHDQLHTWIFKSP---DAALTE-----KSLQDCFESLDASVCDYLLHKDDLSGSTATGLVLRPGTNGKIVLTIAHVGDCRLVLSKRDGTTVELTQDHRLTLEVERERVIQRGGRVVNNRVNGVMAITRAFGDLEFK----GMLNQHPANAGGSSGFGRAFRDTCNEKVPALLTASPDVHELQLNPRDDAFLLLACDGLWDVLTSEEATAIFR 852          
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Match: A0A6J1M0F6_DROHY (probable protein phosphatase 2C T23F11.1 isoform X3 n=3 Tax=Drosophila hydei TaxID=7224 RepID=A0A6J1M0F6_DROHY)

HSP 1 Score: 99.8 bits (247), Expect = 3.840e-21
Identity = 75/206 (36.41%), Postives = 104/206 (50.49%), Query Frame = 1
Query:   91 AMFGVFDGHGGPACAEFLTQSVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHN-DWAHKSGDLSGSTAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERVLSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPPDD---GEYHDEPFLVLASDGLWDVLSNAEVAFITR 696
            A FGV+DGHGG A A+F  + +   +   P  +   +    +RA    D     E +HN  W  +   ++GSTAI+   ++  L  A  GDS A+     G    L   H  SN+ EV+R+L+ GG + NNRV G L  +R +GD   KR      S  PE Q+  V A PD        D  F+VLA DG+WDV+S+ +VA   R
Sbjct:   60 AFFGVYDGHGGAAVAKFAGKHLHKFITKRPEYFGSSIEMAMKRAFLDFDR----EMLHNGSWGEQ---MAGSTAIVVLIKEQRLYCANAGDSRAI-ASVGGLVRPLSVDHKPSNESEVKRILAGGGRVENNRVNGNLALSRALGDFMYKRN----TSKKPEEQI--VTADPDVIVCDVSDDWEFVVLACDGIWDVMSSIQVAEFVR 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10685.656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW5_ECTSI1.660e-14388.41GJ12915 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KBY9_9PHAE1.370e-13987.55PPM-type phosphatase domain-containing protein n=1... [more]
A0A835YKF9_9STRA3.270e-2835.58Phosphatase 2C-like domain-containing protein (Fra... [more]
A0A836CMW2_9STRA2.850e-2732.11Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A7S3U4N4_9SPIT2.050e-2231.36Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A3P8AY98_HELPZ5.490e-2235.12PPM-type phosphatase domain-containing protein n=1... [more]
A0A2G9UXN3_TELCI9.570e-2235.12Protein phosphatase 2C n=1 Tax=Teladorsagia circum... [more]
UPI000C76A1091.420e-2134.16probable protein phosphatase 2C T23F11.1 isoform X... [more]
D0NAE7_PHYIT2.640e-2134.93Protein kinase, putative n=1 Tax=Phytophthora infe... [more]
A0A6J1M0F6_DROHY3.840e-2136.41probable protein phosphatase 2C T23F11.1 isoform X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10685contigH-canaliculatus_F_contig10685:247..3859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue9.4e-23
Seed eggNOG ortholog2880.D7FQA0
KEGG koko:K14803,ko:K17499,ko:K17506
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03009
Hectar predicted targeting categoryother localisation
Exons6
Model size699
Cds size699
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10685.656.1prot_H-canaliculatus_F_contig10685.656.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10685 247..3859 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928729.360634-CDS-H-canaliculatus_F_contig10685:246..3381622928729.360634-CDS-H-canaliculatus_F_contig10685:246..338Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 247..338 -
1696845541.2607455-CDS-H-canaliculatus_F_contig10685:246..3381696845541.2607455-CDS-H-canaliculatus_F_contig10685:246..338Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 247..338 -
1622928729.3734355-CDS-H-canaliculatus_F_contig10685:902..10261622928729.3734355-CDS-H-canaliculatus_F_contig10685:902..1026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 903..1026 -
1696845541.271199-CDS-H-canaliculatus_F_contig10685:902..10261696845541.271199-CDS-H-canaliculatus_F_contig10685:902..1026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 903..1026 -
1622928729.383882-CDS-H-canaliculatus_F_contig10685:1410..15291622928729.383882-CDS-H-canaliculatus_F_contig10685:1410..1529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 1411..1529 -
1696845541.2795417-CDS-H-canaliculatus_F_contig10685:1410..15291696845541.2795417-CDS-H-canaliculatus_F_contig10685:1410..1529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 1411..1529 -
1622928729.3946042-CDS-H-canaliculatus_F_contig10685:2443..25491622928729.3946042-CDS-H-canaliculatus_F_contig10685:2443..2549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 2444..2549 -
1696845541.2883985-CDS-H-canaliculatus_F_contig10685:2443..25491696845541.2883985-CDS-H-canaliculatus_F_contig10685:2443..2549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 2444..2549 -
1622928729.4098372-CDS-H-canaliculatus_F_contig10685:2763..28831622928729.4098372-CDS-H-canaliculatus_F_contig10685:2763..2883Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 2764..2883 -
1696845541.2974672-CDS-H-canaliculatus_F_contig10685:2763..28831696845541.2974672-CDS-H-canaliculatus_F_contig10685:2763..2883Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 2764..2883 -
1622928729.4233708-CDS-H-canaliculatus_F_contig10685:3721..38591622928729.4233708-CDS-H-canaliculatus_F_contig10685:3721..3859Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 3722..3859 -
1696845541.307307-CDS-H-canaliculatus_F_contig10685:3721..38591696845541.307307-CDS-H-canaliculatus_F_contig10685:3721..3859Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10685 3722..3859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10685.656.1

>prot_H-canaliculatus_F_contig10685.656.1 ID=prot_H-canaliculatus_F_contig10685.656.1|Name=mRNA_H-canaliculatus_F_contig10685.656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=233bp
RVAIHPAVVPTIDDKDKKDLEIDTIDTTPFAMFGVFDGHGGPACAEFLTQ
SVSTLLAHSPVLYDEDLTPIQRRARATADSFEELEKVHNDWAHKSGDLSG
STAILSTFQDGVLVMAAVGDSAALYVDHMGKTHNLCPQHSTSNKREVERV
LSMGGTIINNRVAGCLMPTRTIGDLDCKRELGGIVSPHPELQLAAVYAPP
DDGEYHDEPFLVLASDGLWDVLSNAEVAFITRR
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mRNA from alignment at H-canaliculatus_F_contig10685:247..3859-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10685.656.1 ID=mRNA_H-canaliculatus_F_contig10685.656.1|Name=mRNA_H-canaliculatus_F_contig10685.656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3613bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10685:247..3859- (Hapterophycus canaliculatus Oshoro5f female)
AGGGTCGCGATCCACCCCGCGGTGGTGCCAACGATAGACGACAAGGACAA GAAGGACTTGGAGATCGACACCATCGACACCACTCCCTTCGCCATGTTCG GCGTCTTCGACGGCCACGGGGGGCCGGCTTGTGCGGAGGTTTGTGGTCTT GTGGTTGGTTCGTGGCCGCTGATTGGTCGTCTCCTGCGGAATGTTCTTCG AGGTTTTGGGTTTGGACCGTGATTGCAAAGTCTGGTTGTGAAGCCTAGCC TTGGAGGCATGCCTTTTTTTTTCTGTCGCTCGCCTGCTTCCGAGCGAGCA GATTCCTTCGTAAGTACGCGAGGCCGGTTAGACAGGTTCTAAACTGAAAG GTCATGTTTCCGGAGCAAAAATTCAAACCCTCGAACTGCGCTGTGCGCGC TGTCAACAATTTTTGGCAAAAACAAGCGGCAAGCTTGTGTACGACCGGCT CCAAGTTTTTCAGCTGTCGCAACTCCAGATTTCGGAAGCGTTTCGAATGT TCTTTCTACGCGTGCAGAAAGGTTCCAGGTTCAAGAATTTCGGAACTTGT AGCAAAAAATTTGCAGCGTTTCAAACGGAATGAAAGCGTGTGGGAGGTTC CAGTCCAGTGTTGAACGCACTGCAAACACCTTTGCCAACGATTGCCTCCG TGCACTAGCCGTCTCACCGTGTGTGAGGTCTTCACGTGCGTATCTGCTGC TCTCTCTCTCTCTCTCGCAGGGGTCGCACGGAGTTGTTGCACAAAGCGGC CAACAACACTCTGGCGGATTGCGTCGACATGCACGGCGTAAATTGATGTT TCAGTTCCTTTGACCGGGCGGCTTGCCCCCCCCCCCCTCTCCCCTCCGTA CACGTCGGCCTACCGCGGCCCCTTGTCGCACGCTTTCCGAGTGCCTGCCC GCGCGCCTCCCTCCGTGCCTAATCCGCCTGCCTGTCTGCGTTGCCCCCCC TTCCACCCCGCCGTTCGCGAGAGCAGTTCCTGACGCAGAGCGTGTCGACG TTGCTGGCTCACAGTCCCGTCCTGTACGACGAGGACCTTACCCCCATCCA GCGACGAGCGCGCGCCACCGCGGACAGCTTCGAGGAGCTGGAAAAGGTGC GGAAATTTCTGCGCGGGTTGAGGGGAGAAGAGGGTTGGTTGCGCGTGGTC GGTGCGTAGAGAAGAAGTGCCGACAGGTGAGGAGGAGACGAAGGAAATTC GACCGGACACGAACAGAGCGTCGGACAAAGGCGAAGCCAAAGAGCCTACT CCGACCCCAACTCCGACCCGACCCAACCCTGTCCAAACCAAACAAAACGA AATGGCACAGGTGCACAACGACTGGGCGCACAAAAGCGGAGACCTCAGCG GATCCACGGCCATCCTCAGCACCTTCCAGGACGGAGTCTTGGTCATGGCA GCGGTGGGCGACTCAGGTAATGCGGAAAGATATGTCCAGTTTCTTGGTGG TATTTTTACCCCCGACGGTGTCTACCACGAAGGTATCGGTTCCCAGGGAG AGGAAGAATACCGGCCTTCTTCAGAAGCGCCCGTTCGTGTTCATCGTTCA TGGTTCCTTTGATTTGTTCAAGAACTCGGCGTGGGCTCGGATTGGGGGCG CCCCGGAGCGGGGGGGGGGGCAACGCTGAGCTTTCGCCGAACCATTTGCA ACTGGGGTCTTGTACAAGTAGGAGGGGGCTGCTCTGGTAAGATGTACTTC GAAAAACAAGGTTGCCTCAAGGACAACCCAAGGAGTGAAGGCGAGGGGCG CCGCGACGTGGCGCGGCAGGTGGGGGTGGTGAGTCCGTCCGTGCGCGACT CGATGGGTCCGTCCGTGCGCGACTCGATGGCTCAGGTTCGGTGGCTGGGT CTAGACGAAGATGGCGAGGTTGACGCGCTCCTCGGTCGAGTTCTTCGTCG CTGCACTGAGTCCTCGATTCTCTGATGACAGCTCGTGATCATGCGTGCCG TTTTGGTTTCAGAGCTCGCCCCGTAGGCAAGTGCGCTCGCAGAGGCAGGC ATGGAGTGTGTACCCCCCCATAACTCCCTCTACTCCTAAGTCTATTTTCC GCCCTGTCGTTGAGCTGCAACAACAACCGATCGCAACCTCCTGTATTTTC GCCCCACGCATTTTCGGTCCTACGACTTCCCGCTCCCCCCCCCCCCCCCC CCCCTCTCCCCCCCCCTTTGGCTTCCCCTTTTCTCTCCTCGCCCNNNNNN NNNNCTGCCACAACAACCCATCGCCCCCCCCTGTTTTTTCCCCCCCCCCC TTTTCGGTCCTCCCCCTTCCCCCCCCCCCCCCCCCCCCTGCACTTTGCCC CCCCATTTGTCTTTTCCTGGTGCTGCGTAGCCGCACTATACGTGGACCAC ATGGGGAAGACGCACAACCTCTGCCCTCAGCATTCGACTAGCAACAAGCG CGAGGTGGAGCGAGTGCTCAGCATGGGCGGCACCATCATCAACAACAGGG TAAGCTTTCGTTCACGGTGTATCAGCACCGGCGATCGGAGAGGAGGGCCG AAGTATAACTGTAATTGTGGCGGTGCGGTGCGGTGCGATGGTGCGCGGTA CAAAACGACGCGGTACGGAATGGCACGACACGACACACTGTTGTGAGTTG CCGTGCGTTGCAAGTGCCACCTAGTTCCGTACCGTACCCTCACGTATACC GTGCCGAGCCGTATCGTACCGTGCCGTACCGTACCGTTCCATATCATACC GTGCAGTGTAGTGCAGTGCAGTGCGGTGCGGTCCGGTCCGGTGCGGTGCG CAATTGGCGATTTCTGATAAAACTCTTTTTGCAGACCTCTAATGAGAAAC GTCTCCGGCTAAGTGCTTCGTTTGTTTTGGTAGGTGGCGGGCTGCCTGAT GCCCACGAGGACGATCGGCGACCTGGACTGCAAGCGAGAGCTCGGGGGGA TCGTGTCTCCCCACCCGGAGCTGCAGCTCGCGGCAGTCTACGCCCCGCCC GACGACGGTGAGTGTTTGTTGGTTTTTGTGCGAAGGGAAGTCGGTTTCTT CGCGTGTTATGATTGCAAGACGCTGGGATTTGTCGTGTCCTGTAGTTTTG AATGTCCTGGAGTTGAGAAAGACGCCGCCACTGATGTTTTTCTTGTTGTT GTCGTCGTTGTCGTCGTCGTCGTTGTCGTCGTTGTCGTCATCGCTGCGTC GATTTCTAGACGTGCACATTTTTTTGTTTTTGTCATGAGGAGCCGTCCGT GTTGCACCTCCCTTTTTGAATTGTTCTGGCTCCGGCCGGGCGCGCGACGA CGGAAGGCGTCCCTGTCGGAGCAGGCCCGTCGTATAGTGTCATCGGAAGC AACTCGTCTGGTGGCCTCACCTGGCGTTGATTTGGGGTTCGGGCGTAAAG ATGGCTCGTGCACCCAGCAGTATGCTAGTGCATGCACACCGAGGAGAGCG AAGTGGGAAAAAAACGAAGAAGAGCCCAGTCTCAGCATCCCTGATCGCCT GCCTTGCCTTGCCTGCCTGCCTGCCTGCCTGATTGCCTTCAATGCTCCTC GTTGTTCGCCACGGCCTACAGGGGAGTACCACGACGAGCCGTTCCTCGTG CTCGCCAGCGATGGCCTGTGGGACGTGCTCAGCAACGCCGAGGTGGCCTT CATTACGAGGAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10685:247..3859-

>mRNA_H-canaliculatus_F_contig10685.656.1 ID=mRNA_H-canaliculatus_F_contig10685.656.1|Name=mRNA_H-canaliculatus_F_contig10685.656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10685:247..3859- (Hapterophycus canaliculatus Oshoro5f female)
AGGGTCGCGATCCACCCCGCGGTGGTGCCAACGATAGACGACAAGGACAA
GAAGGACTTGGAGATCGACACCATCGACACCACTCCCTTCGCCATGTTCG
GCGTCTTCGACGGCCACGGGGGGCCGGCTTGTGCGGAGAGGGTCGCGATC
CACCCCGCGGTGGTGCCAACGATAGACGACAAGGACAAGAAGGACTTGGA
GATCGACACCATCGACACCACTCCCTTCGCCATGTTCGGCGTCTTCGACG
GCCACGGGGGGCCGGCTTGTGCGGAGTTCCTGACGCAGAGCGTGTCGACG
TTGCTGGCTCACAGTCCCGTCCTGTACGACGAGGACCTTACCCCCATCCA
GCGACGAGCGCGCGCCACCGCGGACAGCTTCGAGGAGCTGGAAAAGTTCC
TGACGCAGAGCGTGTCGACGTTGCTGGCTCACAGTCCCGTCCTGTACGAC
GAGGACCTTACCCCCATCCAGCGACGAGCGCGCGCCACCGCGGACAGCTT
CGAGGAGCTGGAAAAGGTGCACAACGACTGGGCGCACAAAAGCGGAGACC
TCAGCGGATCCACGGCCATCCTCAGCACCTTCCAGGACGGAGTCTTGGTC
ATGGCAGCGGTGGGCGACTCAGGTGCACAACGACTGGGCGCACAAAAGCG
GAGACCTCAGCGGATCCACGGCCATCCTCAGCACCTTCCAGGACGGAGTC
TTGGTCATGGCAGCGGTGGGCGACTCAGCCGCACTATACGTGGACCACAT
GGGGAAGACGCACAACCTCTGCCCTCAGCATTCGACTAGCAACAAGCGCG
AGGTGGAGCGAGTGCTCAGCATGGGCGGCACCATCATCAACAACAGGCCG
CACTATACGTGGACCACATGGGGAAGACGCACAACCTCTGCCCTCAGCAT
TCGACTAGCAACAAGCGCGAGGTGGAGCGAGTGCTCAGCATGGGCGGCAC
CATCATCAACAACAGGGTGGCGGGCTGCCTGATGCCCACGAGGACGATCG
GCGACCTGGACTGCAAGCGAGAGCTCGGGGGGATCGTGTCTCCCCACCCG
GAGCTGCAGCTCGCGGCAGTCTACGCCCCGCCCGACGACGGTGGCGGGCT
GCCTGATGCCCACGAGGACGATCGGCGACCTGGACTGCAAGCGAGAGCTC
GGGGGGATCGTGTCTCCCCACCCGGAGCTGCAGCTCGCGGCAGTCTACGC
CCCGCCCGACGACGGGGAGTACCACGACGAGCCGTTCCTCGTGCTCGCCA
GCGATGGCCTGTGGGACGTGCTCAGCAACGCCGAGGTGGCCTTCATTACG
AGGAGGGGGAGTACCACGACGAGCCGTTCCTCGTGCTCGCCAGCGATGGC
CTGTGGGACGTGCTCAGCAACGCCGAGGTGGCCTTCATTACGAGGAGG
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