mRNA_H-canaliculatus_F_contig10684.655.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 124 bits (310), Expect = 7.890e-28 Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 2 Query: 482 VDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 +D+N +H +H+H LL K+ G+ L K+ C GCS +K + + T+CRSD+KLGRVF+DL G+K V S G Y MI +DD TR TW YFL+SK +A A +L +R G+P + +RSD+ E G F+ +C Sbjct: 570 MDVNEFHNIYAHSHEGLLRTTAKRLGIELTG--KMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVC 714
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.820e-26 Identity = 66/170 (38.82%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 428 LEEIARATITPGLLPT-----TTVDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 L E + T+ L P+ TT+D+N +H +H+H LL K+ G L + C GCS AK + + T+ RSD+KLGRVF+DL G+K V S G Y MI +DD TR W YFL+ K +A +A +L +R GVP + +RSD+ E G F+ +C Sbjct: 641 LGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGE--MHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVC 808
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.850e-26 Identity = 66/170 (38.82%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 428 LEEIARATITPGLLPT-----TTVDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 L E + T+ L P+ TT+D+N +H +H+H LL K+ G L + C GCS AK + + T+ RSD+KLGRVF+DL G+K V S G Y MI +DD TR W YFL+ K +A +A +L +R GVP + +RSD+ E G F+ +C Sbjct: 348 LGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGE--MHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVC 515
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE) HSP 1 Score: 118 bits (296), Expect = 5.510e-26 Identity = 67/170 (39.41%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 428 LEEIARATITPGLLPT-----TTVDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 L E + T+ L P TT+DIN +H +H+H LL K+ G L + + C GCS +K + + T+ RSD+KLGRVF+DL G+K S G Y MI +DD TR TW YFLR+K +A A +L +R GVP + +RSD+ E G F+ +C Sbjct: 107 LGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGD--MHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVC 274
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 9.290e-25 Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 428 LEEIARATITPGLLPT-----TTVDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 L E + T+ L P TT+DIN +H +H+H LL K+ G L + + C GCS +K + T+ RSD+KLGRVF+DL G+K + S G Y MI +DD TR TW FLR+K +A A +L +R GVP + +RSD+ E G F+ +C Sbjct: 162 LGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGD--MHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVC 329
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.840e-24 Identity = 64/170 (37.65%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 428 LEEIARATITPGLLPT-----TTVDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 L E + T+ L P TT+DIN +H +H+H LL K+ G L + + C GCS +K + + T+ RSD+KLGRVF+DL G+K + S G Y MI +DD TR TW YFL+++ +A A +L +R VP + +RSD+ E G F+ +C Sbjct: 229 LGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGD--MHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVC 396
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.440e-23 Identity = 59/147 (40.14%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 482 VDINAYHRSTSHTHLRLLAHFTKQQGVTLKKNVKLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVPKTI---RSDDASELRAGRFSGIC 913 +D+N +H H H +L K+ G+ L K+ C GCS K + T SD+KLGRVF++L GKK V S G Y MI +DD TR W YFLRSK +A A +L ++R G+P I RSD+ E G F+ +C Sbjct: 391 MDVNDFHNIYGHAHEGMLRTTAKRLGIELTG--KMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVC 535
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5KKD5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD5_9PHAE) HSP 1 Score: 108 bits (271), Expect = 9.240e-23 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 581 KLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 K+ C GCS +K + + T+CRSD+KLGRVF+DL G+K V S G N Y MI +DD TR TW YFL+SK +A A +L + G+P + +RSD+ E+ G F+ +C Sbjct: 6 KMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGNHYPMIVKDDFTRRTWIYFLKSKSDAASAFRSFLASVLADGIPSLVEIVRSDNGGEVVRGEFASVC 119
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5KVT7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT7_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 9.660e-17 Identity = 48/114 (42.11%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 581 KLQPCGGCSAAKGYNAQVKKPTECRSDEKLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVPKTI---RSDDASELRAGRFSGIC 913 K+ GCS KG + T SD+KLGRVF+DL GKK V S G Y MI +DD TR YFLRSK +A +L ++R G+P I RSD+ + G F+ +C Sbjct: 250 KMHAYSGCSMGKGIRKAIAHVTTNGSDKKLGRVFVDLGGKKGVASIGGKHYPMILKDDFTRRARMYFLRSKSDAGSVFRSFLANVRADGIPSLIEIVRSDNGGKFFGGEFASVC 363
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 6.330e-14 Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 665 KLGRVFIDLSGKKPVQSHGRNLYAMIFRDDKTRMTWEYFLRSKDEAPVALEKWLTDIRDVGVP---KTIRSDDASELRAGRFSGIC 913 ++GRVF+DL GKK V S G Y MI +DD TR W YFLR+K +A A +L +R G+P +T+RSD+ E G F+ +C Sbjct: 327 RIGRVFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVC 412 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10684.655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10684.655.1 >prot_H-canaliculatus_F_contig10684.655.1 ID=prot_H-canaliculatus_F_contig10684.655.1|Name=mRNA_H-canaliculatus_F_contig10684.655.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=144bp GGPIGCEGSVALHAGGASECWIFDSGASGHVTPNADLLTNFRQCQRFLRVback to top mRNA from alignment at H-canaliculatus_F_contig10684:1941..2875+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10684.655.1 ID=mRNA_H-canaliculatus_F_contig10684.655.1|Name=mRNA_H-canaliculatus_F_contig10684.655.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=935bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10684:1941..2875+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10684:1941..2875+ >mRNA_H-canaliculatus_F_contig10684.655.1 ID=mRNA_H-canaliculatus_F_contig10684.655.1|Name=mRNA_H-canaliculatus_F_contig10684.655.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=864bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10684:1941..2875+ (Hapterophycus canaliculatus Oshoro5f female)back to top |