mRNA_H-canaliculatus_F_contig10682.653.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 365 bits (936), Expect = 7.330e-115 Identity = 184/195 (94.36%), Postives = 187/195 (95.90%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFKILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR A +DFYRAFRAKEKTSFHAAKVFAMECFK+LPVKVHWRLYLEIADLARRENRFVEARKLYRKAS VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR Sbjct: 215 PTTRL-AFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKAS-----VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 403
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 361 bits (926), Expect = 8.860e-115 Identity = 182/195 (93.33%), Postives = 185/195 (94.87%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFKILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR A +DFYRAFRAKEKTSFHAAKVFAMECFK+LPVKVHWRLYLEIADLARRENRFVEARKLYRK VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR Sbjct: 51 PTTRL-AFKDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRK-------VTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 237
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK) HSP 1 Score: 254 bits (648), Expect = 2.120e-82 Identity = 129/195 (66.15%), Postives = 150/195 (76.92%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFKILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR ++FYR FRAKEK SF AAK FA CF LP KVHWRLYLEIA+L++RENRF EAR+LY+K V ++QP+A+QGW+EY KLEEE G L CS+IL RGL FC YSE+LLIKA+K ER G L AR LL+RLK G+E VWRTVLEGALLEAR+G + VARKV KYLM VPWYGPIY+EAFR Sbjct: 26 PTTRLH-FKEFYRQFRAKEKASFAAAKAFAATCFDRLPQKVHWRLYLEIAELSKRENRFEEARQLYQK-------VCRLQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKVWRTVLEGALLEARAGRSAVARKVFKYLMQQVPWYGPIYFEAFR 212
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA) HSP 1 Score: 245 bits (625), Expect = 8.740e-74 Identity = 120/191 (62.83%), Postives = 149/191 (78.01%), Query Frame = 1 Query: 19 ALQDFYRAFRAKEKTSFHAAKVFAMECFK--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 A +DFYRAFR +E+ SF A+ A E K LP +HWR+YLE+ADLARR NR+VE+RKLY+K V ++QPFASQGW+EY KLEE+ G ++R S IL GL +CEYSETLL +AVK +E+ GNL AR +L+RLKHVGI+ VWRTVLEGALLEAR+GN D+AR+VLKYLM HVPWYGP+Y EA++ Sbjct: 3 AFKDFYRAFRVEERHSFQKAEALAQEALKDGSLPESIHWRVYLELADLARRSNRYVESRKLYQK-------VCQLQPFASQGWLEYSKLEEDCGFMNRVSNILHAGLEYCEYSETLLTRAVKHQEKMGNLSSARGILARLKHVGIDKVWRTVLEGALLEARAGNHDMARRVLKYLMHHVPWYGPLYLEAYK 186
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: B7FTG6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTG6_PHATC) HSP 1 Score: 240 bits (612), Expect = 3.390e-72 Identity = 116/191 (60.73%), Postives = 150/191 (78.53%), Query Frame = 1 Query: 19 ALQDFYRAFRAKEKTSFHAAKVFAMECFK--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 A ++FYR FR++E+ SF A+ FA++ LPV VHWR+YLE+ADLA+R NRFVEAR LY++ V + QP+ASQGW+EY KLEEE G ++R + IL GL +CEYSE LL +AVK +E+ GN++GARELL+RLKHVGI+ VWRTVLEGALLE+R+GN +AR+VLKYLM HVPWYGP+Y EA++ Sbjct: 160 AFKEFYRCFRSEERFSFQKAEEFALDALDNGSLPVSVHWRVYLELADLAKRSNRFVEARSLYQR-------VCQQQPYASQGWLEYSKLEEECGHMNRVTNILHAGLEYCEYSENLLTRAVKHQEKMGNVNGARELLARLKHVGIDKVWRTVLEGALLESRAGNAFMARRVLKYLMHHVPWYGPLYLEAYK 343
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA) HSP 1 Score: 219 bits (557), Expect = 4.800e-70 Identity = 104/159 (65.41%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 109 LPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 LP ++HWR++LE+ADLA+R NRF EAR+LYRK V +QP+ASQGW+E+ KLEEE GDL +C+ +L GL++CEY+E LL KA+K EER G+L AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN +AR+VLKYLM HVPWYGP+Y EA+R Sbjct: 4 LPKQLHWRVHLELADLAKRANRFDEARRLYRK-------VCTLQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQVWRTVLEGALLEARAGNVAMARRVLKYLMHHVPWYGPLYLEAYR 155
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA) HSP 1 Score: 240 bits (613), Expect = 5.910e-70 Identity = 119/195 (61.03%), Postives = 150/195 (76.92%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFKILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR +DFYR FR KE+ SF AAK +AM CF++LP+KVHW+L+LE+ADLA+RENR EAR+LYR+ V ++QP A+Q W+ Y ++EEE GD+ R IL++GL FCEYSE+LL +A+K ER G+L AR LLSRL+HV I+ VWRTVLEGALLEAR+GN VARKV +YL+ VPWYGPIY EAFR Sbjct: 953 PTTRMQ-FKDFYRQFRIKERLSFEAAKDYAMACFELLPLKVHWKLFLELADLAKRENRIAEARRLYRR-------VCRLQPHAAQAWLVYSRMEEECGDMERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNDRVARKVFEYLIGCVPWYGPIYNEAFR 1139
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A448YUD9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUD9_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.030e-69 Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFK--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR A ++FYR R++E+TSF AA+ FAM LP +HWR+YLE+ADLA+R NRF EAR+LY++ V K+QP+ASQGW+E+ KLEEE G+++ C++IL GL +CEYSE+LL +A+K EE+ GNL ARE L+RLKHVGIE VWRTVLEGA+LEAR+GN +AR+VLKYLM HVPWYGP+Y EA++ Sbjct: 994 PATR-SAFKEFYRKLRSEERTSFQAAENFAMLSLSDGSLPESIHWRVYLELADLAKRSNRFEEARRLYQQ-------VYKLQPYASQGWLEFSKLEEECGNMNACAKILSAGLEYCEYSESLLSRAIKHEEKRGNLGRAREFLARLKHVGIEKVWRTVLEGAMLEARAGNDVMARRVLKYLMHHVPWYGPLYLEAYK 1182
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA) HSP 1 Score: 238 bits (606), Expect = 5.140e-69 Identity = 117/200 (58.50%), Postives = 150/200 (75.00%), Query Frame = 1 Query: 19 ALQDFYRAFRAKEKTSFHAAKVFAMECF-----------KILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 A ++FYR FR KE++SF A+ FA+ +LP +VHWR++LE+ADLA+R N+F EAR++YRK V +QP+ASQGW+E+ KLEEE G+L RC+ +L GL++CEY+E LL KA+K EER GNL AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN +AR+VLKYLM HVPWYGP+Y EA+R Sbjct: 1011 AFKEFYREFRQKERSSFVEAEEFALRSLGNDEDKTVVEAAVLPKQVHWRVHLELADLAKRANKFDEARRVYRK-------VCTLQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKVWRTVLEGALLEARAGNVGMARRVLKYLMHHVPWYGPLYLEAYR 1203
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Match: A0A1E7FB42_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB42_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.040e-68 Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 1 Query: 1 PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFK--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKASGRRAFVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFR 585 P+TR + +DFYR RA+E+ SF A+ +AM LP +HWR++LE+ADLA+R NRF EAR LY++ V +QP+ASQGW+E+ KLEEE G+++ C++IL GL +CEYSE LL +A+K EE+ GN+ ARELLSRLKHVGIE VWRTVLEGA+LEAR+GN +AR+VLKYLM HVPWYGP+Y EA++ Sbjct: 135 PATR-SSFKDFYRRLRAEERLSFKDAEKYAMSSLSDGSLPESIHWRVFLELADLAKRSNRFEEARNLYQQ-------VYTLQPYASQGWLEFSKLEEECGNMNACAKILFAGLEYCEYSENLLTRAIKHEEKRGNISRARELLSRLKHVGIEKVWRTVLEGAMLEARAGNDVMARRVLKYLMHHVPWYGPLYLEAYK 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10682.653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10682.653.1 >prot_H-canaliculatus_F_contig10682.653.1 ID=prot_H-canaliculatus_F_contig10682.653.1|Name=mRNA_H-canaliculatus_F_contig10682.653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=195bp PSTRFDALQDFYRAFRAKEKTSFHAAKVFAMECFKILPVKVHWRLYLEIAback to top mRNA from alignment at H-canaliculatus_F_contig10682:903..4105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10682.653.1 ID=mRNA_H-canaliculatus_F_contig10682.653.1|Name=mRNA_H-canaliculatus_F_contig10682.653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3203bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10682:903..4105- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10682:903..4105- >mRNA_H-canaliculatus_F_contig10682.653.1 ID=mRNA_H-canaliculatus_F_contig10682.653.1|Name=mRNA_H-canaliculatus_F_contig10682.653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1170bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10682:903..4105- (Hapterophycus canaliculatus Oshoro5f female)back to top |