mRNA_H-canaliculatus_F_contig1065.631.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1065.631.1
Unique NamemRNA_H-canaliculatus_F_contig1065.631.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: D8LMK1_ECTSI (Putative Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK1_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 7.710e-135
Identity = 221/295 (74.92%), Postives = 244/295 (82.71%), Query Frame = 1 
Query:    1 LTAAGLG-LSSPATGFIASAAPTXXXXXXXXXXXXXXXXXIKMLADADSAAKPAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSNDLVTAYFTYLSNKDEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGET----MTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVAKK 870
            L AAGL  L+SPA+GF+A+         XXXXXXX      K+ AD  S A+PAFTLYSSDKCPYAQRTWIAARELGVPF+FHAMELGKDNRE+WFLKLNPLGKVPT+VCGDDV+YESLVVNEYL+E FPPGGE++ SPLLP + A +A+ RI+ASRS+DLVTAYFTYLSNKDE Q      X X    ALDA+AAA AGEGEACGWLCGE     MTLAD AYFPFLERI ATL PFKGWSL +IE+PALVAWI+KCRARESVAGTL+DPAMWAELYK FLGVNYFERAGVAKK
Sbjct:    7 LAAAGLAALNSPASGFVAAVGTPARAAPXXXXXXXT-----KVSADG-SDAEPAFTLYSSDKCPYAQRTWIAARELGVPFKFHAMELGKDNREEWFLKLNPLGKVPTIVCGDDVIYESLVVNEYLAEKFPPGGEYDPSPLLPASPADKAKVRIVASRSSDLVTAYFTYLSNKDEEQXXXXXXXXXXXXXALDAWAAASAGEGEACGWLCGEAGEGRMTLADVAYFPFLERIAATLEPFKGWSLGDIEVPALVAWIDKCRARESVAGTLKDPAMWAELYKMFLGVNYFERAGVAKK 295
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: A0A835ZAX0_9STRA (Putative glutathione S-transferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 3.500e-60
Identity = 115/236 (48.73%), Postives = 148/236 (62.71%), Query Frame = 1 
Query:  133 DADSAAKPAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSNDLVTAYFTYLSNKDEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQ-DPAMWAELYKKFLGV 837
            DA+SA    +TLY+S +CPYAQR+ I A ELGVPF+ H +ELG+DN++DW+ K+NPLGKVP V  GDD+V ESLV+NEYL E F   G    S L+P     RA  RI   RS+ LV AY  YL   D     EK E F KEL  L+   A         GWL G+ MTLAD AYFPF ER    L+ F+G+      +P +++W E+C++R +VA TL+ DP  W ++Y K+LGV
Sbjct:   46 DAESAQ---YTLYASAQCPYAQRSVITANELGVPFKLHPIELGRDNKQDWYQKINPLGKVPAVQAGDDIVVESLVINEYLVEKF---GADATSTLMPADALGRALVRIAVQRSSQLVDAYMGYLRTGD----AEKEEAFVKELNNLEQILAK-----STSGWLVGQHMTLADVAYFPFFERAIPCLAAFRGFDWDAAGVPHVMSWFERCKSRPAVAETLRKDPHEWVDIYSKYLGV 266
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: K9T6X3_9CYAN (Glutathione S-transferase n=5 Tax=Pleurocapsales TaxID=52604 RepID=K9T6X3_9CYAN)

HSP 1 Score: 176 bits (446), Expect = 1.640e-47
Identity = 102/236 (43.22%), Postives = 142/236 (60.17%), Query Frame = 1 
Query:  169 YSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSN-DLVTAYFTYLSNK---DEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVA 864
            Y +  CPYAQR+WIA  ELG+ +E   +ELGKDN+ DWF  LNP G VPT+  G+ VVYESLVVNEYL E F  GG+     L+P   A RA+ARI+ SR +   V   ++YLS+K   DE ++ + R    +EL+ LD       G      +  G+T+TLAD A+ PF +R++  L+ FK + L  + LP L AW+E    R+S + T        E+Y +FL ++YF+R G+A
Sbjct:   17 YFNRNCPYAQRSWIALIELGIAYEPIEIELGKDNKTDWFRALNPNGTVPTIKHGETVVYESLVVNEYLCEVF--GGD-----LMPSTPANRARARILMSRCDAKFVKLGYSYLSHKRREDETKDDQLRSQLEEELRFLDNAIGNWGGS-----YFLGDTLTLADIAFIPFFQRMNVALASFKNFKLENLNLPHLNAWLEAISHRDSCSQTQMSAQQIEEVYARFLNLDYFKRIGIA 240
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: B7KIT2_GLOC7 (Glutathione S-transferase domain protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KIT2_GLOC7)

HSP 1 Score: 174 bits (442), Expect = 5.470e-47
Identity = 102/241 (42.32%), Postives = 136/241 (56.43%), Query Frame = 1 
Query:  154 PAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSND-LVTAYFTYLSNK---DEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVA 864
            P    Y +  CPYAQR+WIA  EL V F+   +ELG DN+ DWFL LNP GKVP +  G+ +VYESL+VNEYLSE F   G H    L+P     RA  RI+  R +  LV   ++YLS+K   D A++ + ++    EL+ LD     G G      +  GE ++L D AY PF +RI  TL  FK + L E  LP L  W+E    RES   T  +P    E+Y  FL ++YF++ G+A
Sbjct:    7 PELQFYFNPNCPYAQRSWIALLELNVNFKPIEIELGSDNKTDWFLALNPNGKVPVIQQGETIVYESLIVNEYLSEVF---GGH----LMPSEAGKRAWGRILMGRCDSHLVKLSYSYLSHKREEDSAKDEQLKQDLEAELRFLDQAIQKGGGT-----YFLGEELSLVDIAYVPFFQRISVTLPAFKHFDLKEKNLPYLNQWLEAIALRESCIKTSMNPEKIKEIYSHFLKIDYFKKVGIA 235
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: UPI001784B012 (glutathione S-transferase family protein n=1 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI001784B012)

HSP 1 Score: 173 bits (439), Expect = 1.470e-46
Identity = 103/236 (43.64%), Postives = 139/236 (58.90%), Query Frame = 1 
Query:  169 YSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSND-LVTAYFTYLSNK---DEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVA 864
            Y++  CPYAQR+WI   EL V FE+  + LGKDN+ +WF  LNP G VP +  G+ VVYESLVVNEYL E F  GG+     L+P  LAARA+ARI+ +R +  LV   ++YLS+K   D A++ + R    +EL  LDA   A  G      +  GET++L D A+ PF ER++  LS +K + +       L  W+E    RE+   T   P    ELY +FL V+YF+R GVA
Sbjct:   10 YANRNCPYAQRSWITLLELSVDFEYQEISLGKDNKTEWFCALNPNGTVPVIKHGETVVYESLVVNEYLCEVF--GGK--GVTLMPSQLAARARARILMTRCDSKLVKLSYSYLSHKRTEDAAKDDQLRAHLEEELLLLDAAIEASGGP-----YFLGETVSLVDIAFMPFFERMNVALSAWKDFEIENSARVHLNTWLEAMSNRETYRQTRLSPERIKELYSQFLNVDYFKRVGVA 236
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: UPI001E61AE57 (glutathione S-transferase family protein n=1 Tax=Nostoc sphaeroides TaxID=446679 RepID=UPI001E61AE57)

HSP 1 Score: 169 bits (428), Expect = 5.850e-45
Identity = 104/241 (43.15%), Postives = 140/241 (58.09%), Query Frame = 1 
Query:  169 YSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSNDLVTAY-FTYLSNKDEAQEGEK-------REXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVAK 867
            Y++  CPYAQR+W+A  EL V FE+  +ELGKDN+ DWF  LNP G VPT+  G+ VVYESLVVNEYL E F    E N   L+P   A RA+ARI+ SRS+   T   ++YLS+K  A E +        R     EL+ LD   A G  +G    +  GE ++L D AY PF ER+   L+ +K + +  + LP L  W++    RE+   T   P    ELY +FL V+YF+R G+A+
Sbjct:    8 YANPNCPYAQRSWLALLELQVNFEYKEIELGKDNKTDWFGALNPNGTVPTIKHGETVVYESLVVNEYLCEVFG-NDEIN---LMPREPAVRARARILMSRSDTKFTKIAYSYLSHKRNASEEDSVTKDDQLRIHLEDELRFLDN--AIGLTDGY---YFMGEIVSLVDIAYIPFFERMSVALAKWKNFEIKSLSLPHLNNWLDVMSNREAYQKTRMSPQRIIELYSRFLDVDYFKRVGIAQ 239
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: A0A8J6XCW3_9CYAN (Glutathione S-transferase family protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J6XCW3_9CYAN)

HSP 1 Score: 169 bits (428), Expect = 6.030e-45
Identity = 97/240 (40.42%), Postives = 140/240 (58.33%), Query Frame = 1 
Query:  169 YSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSND-LVTAYFTYLSNKDEAQE------GEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVAK 867
            Y++  CPYAQR+W+   EL V FE+  +ELGKDN+ DWFL+LNP G VP +  GD V+YESLVVNEYL E F   G+   + L+P   A R++ARI+ +R +   V   ++YLS+K  A+E       + R     EL+ LD   ++  G      +  G+T++L D AY PF ER+   L+ +K + +  + LP L  W+E    RE+   T        ELY +FL V+YF+R G+A+
Sbjct:   10 YANRNCPYAQRSWLTLLELKVDFEYQEIELGKDNKTDWFLELNPNGTVPVIKHGDTVIYESLVVNEYLCEVF---GDDKVN-LMPNDPAGRSRARILINRCDSKFVKLSYSYLSHKRTAEEDSVVKDNQLRTQLEDELRFLDNAISSTGGP-----YFMGKTVSLVDTAYMPFFERMSVALAHWKDFDIKNLSLPHLNTWLEVMSNREAYQKTRMSLERIVELYSRFLNVDYFKRVGIAQ 240
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: A0A0G4EBN7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EBN7_VITBC)

HSP 1 Score: 168 bits (426), Expect = 4.620e-44
Identity = 99/236 (41.95%), Postives = 130/236 (55.08%), Query Frame = 1 
Query:  154 PAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSNDLVTAYFTYLSNKDEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFK--GWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERA 855
            P    Y++ +CPYAQRTWI  +ELGVP+E   + LGKDN+E WF ++NP GKVP V   DDVVYES V NEYL+E F        S L+P  L  RA+ RI+  R +  V A++ YLS     +E   ++    E+  L+    A A +     W  G+ MTLAD A FPF+ER  AT   FK  GW        A +AW +K    +SV  T+     + E+YK  L   YF+RA
Sbjct:   60 PQLKFYTNGRCPYAQRTWIVLKELGVPYEHKDVVLGKDNKEAWFKQMNPNGKVPVVQYFDDVVYESNVCNEYLAETFQ-------SSLMPADLQQRARMRIVMQRVDAFVKAFYLYLSCNKPKKEAMLKQKLMDEIAFLEMMLKANASKSS---WFVGDKMTLADIALFPFVERAAATHGAFKKVGWEELLKGSRAFLAWYKKMLTVKSVQETMGKKEQFVEMYKGMLKNQYFQRA 285
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: E0UAM9_GLOV7 (Glutathione S-transferase domain protein n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UAM9_GLOV7)

HSP 1 Score: 166 bits (421), Expect = 5.200e-44
Identity = 101/242 (41.74%), Postives = 136/242 (56.20%), Query Frame = 1 
Query:  142 SAAKPAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSND-LVTAYFTYLSNKDEAQEGEKREXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVA 864
            S + P    Y +  CPYAQRTWIA  EL V F+   +ELG DN+ DWFL LNP GKVP +  G+  VYESL+VNEYLSE        + + L+P +   RA ARI+ +R +  LV   F+YL++K  A+  EK E    EL+A   F     GE     +  GE  TL D A+ PF +R+  TL  FK + +S+   P L  W+E   +RES   T        E+Y +FL ++YF++ GVA
Sbjct:    3 SESLPELVFYFNRNCPYAQRTWIALLELNVNFQPREIELGSDNKTDWFLSLNPNGKVPVIEQGETRVYESLIVNEYLSEI-------SGNKLMPSSAGKRALARILMARCDSHLVKTSFSYLAHKS-AENLEKEEQLKSELEAELRFLDTVIGE-SGDSYFLGE-FTLTDIAFIPFFQRLAVTLPAFKNFEISQNNFPHLNRWLETMASRESCIQTAMKAEAIKEIYARFLKIDYFKKIGVA 234
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BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Match: A0A0M0SJF3_9CYAN (Glutathione S-transferase n=1 Tax=Hapalosiphon sp. MRB220 TaxID=1704290 RepID=A0A0M0SJF3_9CYAN)

HSP 1 Score: 159 bits (401), Expect = 4.060e-41
Identity = 99/241 (41.08%), Postives = 136/241 (56.43%), Query Frame = 1 
Query:  169 YSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNREDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLPEALAARAQARIIASRSNDLVTAY-FTYLSNKDEAQEGEK-------REXFXKELKALDAFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEIELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVAK 867
            Y +  CPYAQR+W+A  EL V FE   +ELGKDN+ DWF  LNP   VP +     VVYESLVVNEYL E F     +N   L+P   AARA ARI+ SR +   T   ++YLS+K +A + +        R     EL+ LD     G+ +G    +  GET++L D AY PF ERI   L+ +K + +  + LP L  W++    R++   T   P    +LY +FL V+YF+RAG+A+
Sbjct:    8 YVNPNCPYAQRSWLALLELQVNFESKEIELGKDNKTDWFRALNPDCTVPIIKHDQTVVYESLVVNEYLCEVFG----NNEINLMPREAAARAWARILMSRCDTKFTKLAYSYLSHKRDASQEDSITKDDQLRTQLEYELRFLDNV--IGSTDGS---YFLGETVSLVDIAYIPFFERILVALAKWKDFEIKSLPLPHLNNWLDVMSNRQAYQKTRMSPQRIIKLYSRFLDVDYFKRAGIAQ 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1065.631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK1_ECTSI7.710e-13574.92Putative Glutathione S-transferase n=2 Tax=Ectocar... [more]
A0A835ZAX0_9STRA3.500e-6048.73Putative glutathione S-transferase (Fragment) n=1 ... [more]
K9T6X3_9CYAN1.640e-4743.22Glutathione S-transferase n=5 Tax=Pleurocapsales T... [more]
B7KIT2_GLOC75.470e-4742.32Glutathione S-transferase domain protein n=1 Tax=G... [more]
UPI001784B0121.470e-4643.64glutathione S-transferase family protein n=1 Tax=M... [more]
UPI001E61AE575.850e-4543.15glutathione S-transferase family protein n=1 Tax=N... [more]
A0A8J6XCW3_9CYAN6.030e-4540.42Glutathione S-transferase family protein n=1 Tax=I... [more]
A0A0G4EBN7_VITBC4.620e-4441.95Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
E0UAM9_GLOV75.200e-4441.74Glutathione S-transferase domain protein n=1 Tax=G... [more]
A0A0M0SJF3_9CYAN4.060e-4141.08Glutathione S-transferase n=1 Tax=Hapalosiphon sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1065contigH-canaliculatus_F_contig1065:21644..27956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score181.4
Seed ortholog evalue5.1e-43
Seed eggNOG ortholog118163.Ple7327_2576
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
EggNOG free text desc.PFAM Glutathione S-transferase, N-terminal domain
EggNOG OGs1G4XE@1117,COG0625@1,COG0625@2
EC2.5.1.18
COG Functional cat.O
Best tax levelCyanobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative Glutathione S-transferase
Ec32 orthologEc-05_003040.1
Exons6
Model size1833
Cds size750
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1065.631.1prot_H-canaliculatus_F_contig1065.631.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1065 22604..27833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928722.4213226-UTR-H-canaliculatus_F_contig1065:21643..226031622928722.4213226-UTR-H-canaliculatus_F_contig1065:21643..22603Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1065 21644..22603 -
1696845539.5231087-UTR-H-canaliculatus_F_contig1065:21643..226031696845539.5231087-UTR-H-canaliculatus_F_contig1065:21643..22603Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1065 21644..22603 -
1622928722.5048213-UTR-H-canaliculatus_F_contig1065:27833..279561622928722.5048213-UTR-H-canaliculatus_F_contig1065:27833..27956Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1065 27834..27956 -
1696845539.6086552-UTR-H-canaliculatus_F_contig1065:27833..279561696845539.6086552-UTR-H-canaliculatus_F_contig1065:27833..27956Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1065 27834..27956 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928722.4339027-CDS-H-canaliculatus_F_contig1065:22603..227741622928722.4339027-CDS-H-canaliculatus_F_contig1065:22603..22774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 22604..22774 -
1696845539.5378299-CDS-H-canaliculatus_F_contig1065:22603..227741696845539.5378299-CDS-H-canaliculatus_F_contig1065:22603..22774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 22604..22774 -
1622928722.4466684-CDS-H-canaliculatus_F_contig1065:23347..235301622928722.4466684-CDS-H-canaliculatus_F_contig1065:23347..23530Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 23348..23530 -
1696845539.547571-CDS-H-canaliculatus_F_contig1065:23347..235301696845539.547571-CDS-H-canaliculatus_F_contig1065:23347..23530Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 23348..23530 -
1622928722.4614315-CDS-H-canaliculatus_F_contig1065:24801..249811622928722.4614315-CDS-H-canaliculatus_F_contig1065:24801..24981Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 24802..24981 -
1696845539.5583367-CDS-H-canaliculatus_F_contig1065:24801..249811696845539.5583367-CDS-H-canaliculatus_F_contig1065:24801..24981Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 24802..24981 -
1622928722.4714282-CDS-H-canaliculatus_F_contig1065:25600..256861622928722.4714282-CDS-H-canaliculatus_F_contig1065:25600..25686Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 25601..25686 -
1696845539.5716596-CDS-H-canaliculatus_F_contig1065:25600..256861696845539.5716596-CDS-H-canaliculatus_F_contig1065:25600..25686Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 25601..25686 -
1622928722.4828606-CDS-H-canaliculatus_F_contig1065:26323..263701622928722.4828606-CDS-H-canaliculatus_F_contig1065:26323..26370Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 26324..26370 -
1696845539.5912125-CDS-H-canaliculatus_F_contig1065:26323..263701696845539.5912125-CDS-H-canaliculatus_F_contig1065:26323..26370Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 26324..26370 -
1622928722.4932826-CDS-H-canaliculatus_F_contig1065:27750..278331622928722.4932826-CDS-H-canaliculatus_F_contig1065:27750..27833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 27751..27833 -
1696845539.5999687-CDS-H-canaliculatus_F_contig1065:27750..278331696845539.5999687-CDS-H-canaliculatus_F_contig1065:27750..27833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1065 27751..27833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1065.631.1

>prot_H-canaliculatus_F_contig1065.631.1 ID=prot_H-canaliculatus_F_contig1065.631.1|Name=mRNA_H-canaliculatus_F_contig1065.631.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=250bp
MLADADSAAKPAFTLYSSDKCPYAQRTWIAARELGVPFEFHAMELGKDNR
EDWFLKLNPLGKVPTVVCGDDVVYESLVVNEYLSEAFPPGGEHNASPLLP
EALAARAQARIIASRSNDLVTAYFTYLSNKDEAQEGEKREKFEKELKALD
AFAAAGAGEGEACGWLCGETMTLADAAYFPFLERIDATLSPFKGWSLSEI
ELPALVAWIEKCRARESVAGTLQDPAMWAELYKKFLGVNYFERAGVAKK*
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mRNA from alignment at H-canaliculatus_F_contig1065:21644..27956-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1065.631.1 ID=mRNA_H-canaliculatus_F_contig1065.631.1|Name=mRNA_H-canaliculatus_F_contig1065.631.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6313bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1065:21644..27956- (Hapterophycus canaliculatus Oshoro5f female)
CTGACAGCTGCGGGTCTAGGATTGAGCTCGCCAGCCACAGGCTTCATTGC
ATCCGCTGCCCCAACCCCTTCGCTGTCTGCTTCGTCTACTTCAGCGTCGT
CGTCTACTGCAACCTCCATCAAGATGCTCGCTGACGCTGATTCCGCAGCC
AAGCCGGCGTTCACCTTGTACAGCTCTGACAAGTGCCCCTATGCGCAGCG
CACGTGGTGAGTTTGATTTACCGCGCCTCCTCCGTCTTGCGATCGGGTTT
TGCGTGCGTTTCTTCATCAGCCTCTTATTGTTTTTCTCTACCATTTTGAT
TAGTGTTGAACCCCGCGCAACATGTGTCAGGTCCGAACAGAGGTGCACCC
TGCACCCAAAACATCCCGCCAACGATCGACACGCAACGATCGATTTCCTA
GTGTGTTCCCGAACGAGTTTGCGTACAAACCAACTTCTGTAGTAACAATA
TCCAGGCGGGTTGATATAGAGCTGGCATGTACGTACGGTACGCCTCTTGG
AGTCTTCTCCGCGGGTTATCTTTGCATGCCTTTCCTGACTTCAGTTCGCA
ATCCGCTTGGATCCACGTCCTTGTTTCGTCGCAGCATCTTCAAAAATGGA
TTACGATCCCTTGCACGATACACTGGCCGCCCAAGATAGACCGAGAAAAT
TGTTGGTCGGCGGAGGTATCAGGAAACTTCTTTTTCAAGGAAATCGAAGC
GCATAAGCGGATTTTACCATCTTTCCGATGGTAATCTAACCGTACACCTT
GGGATAAACATTAGATTTTTGTAACACAACATAACTAATTATTATTTATC
TATACTAATAACATTCGATCACTTACGATATTTGTTTTTATTGCTCGTAT
ATATATACCTGGCCGGCTGTGAACTCTGCACTTGCTTCGTTTCTTCACGT
CGCATCACAGACAGAGAGTATTTTGAAGAAAACATTTCTCGAGAACCTAC
ACTATGATCTATTGTTTCGCTTCCCATAGTTATTCATGATCCATCATAAC
ATTTGCGGTAAGTTACACACAAACTCTCTCCTGTTCATGCTTTTGTCCCC
ATCAATGAACCCTCACTGTTTTGAACTCAACAGAAGCCTCGGGGTACGCC
TCACACGACGTACCTCAGGAGGTGTTCTAACGGTGTTGTTATGTTTTCTT
TAAACATCGAAGTAGGATCGTGTTGGTTGTTGTTGTCCCTCTTAGAGCAC
TCACGCTTCGATGCTGCCGTCTCGTGAACGCTCGTTGTGACGCCACCACT
GAACGATATATTCCAGCGTTGGAGATCGACGGCAGAACCAGGGTCGATCC
AATTTTGAAAATCACGAGGGAAAAAAAGCCTTTACTTCCAAAATACGAGG
TTTTTCGAGTTTCGGAAGAGGGGCTTCGTGCAGAGAAAGGGTTTCCCGCC
GATGTTTACGATGGAGAAGTGGTCATAGTTACAACTCAACGTCGTTCCGT
GGGAGAGCTCCGGGGTTCCGTGGTTTGAAATATACAGGAGAACGCGACTC
GGGTTACAACGTTACGTACAACCTTACACATCATAGCGCTGTACTTCCAT
CGGCTGCTTGCCATCTTGCCGTTTGCTGGCTTGCAGGATCGCGGCAAGGG
AGCTCGGCGTGCCGTTCGAATTTCATGCAATGGGTAAGCTCAATTTCGCC
GGTCGCACACAGATGAACCCAAACACTACCCCTCGGGCCTCAGTCGGTGG
TTTTGTTAGCCCATCTGTGATACCCACGGAGGCCTGCAGGGAACACTGCA
AACGAACACCGGGCGGATAAGATCTGGAGCGGGTTTCACTGGCGGTAGCA
GTTCGGCGAAAAGGGCGATGATAATCTAGACAACGGCCTTGTTGAGGTTG
TGCTTGGTCAAGTCTCTTCGTCCTTGCTGTCGCAACAACGGCTCTCATGC
CCGCCCGCTGACGCAAAATGTTACCGCCCGCGCGCTTCAAGCATCGGAGA
AGTGATCAAATGCCGACTCGAAATGTTGCCGAGCGTTCATCCCAGGAAAA
AAGGTGGCGAAACACGCGCGAGCTTCTCGCCCTGAAAAGGAGGTTTATCG
AATCGCCTACCATGTTCGTAGCCTCCTCTTTCAGTTCTCTCGGGTACCGA
TACTTGCACATTCGTGTTGATGAGAGTTGAAGCCGCTGCCTCCGCTACCA
CCGCACACGAGGTACGCGATCACCGAGCGGCTTGAATGCCACGGGGCTCC
ACGTTAAACTTGTGTACCCGCCGACTGCCTCTTTCTACCTTGCAATACGC
GTGTCATCCGAATCGAACAGAGCTGGGCAAGGACAACCGCGAGGATTGGT
TTCTTAAGCTCAACCCCCTTGGGAAGGTACCCACCGTTGTCTGCGGCGAT
GACGTGGTGAGTTTTGAGCACACTCGGTTGCATCCCCATGAGCGTTTTTC
GCGCCGAACTTGAAATGTTCCCGGTAACGCAGCTGCAACGGGTGGTGTCG
CCACCCGACACCCAATGCTTCCTTGGACGGGAGTATCTCACTCTCAAAAG
TTTGGCTACTCACTCTCAAGATCGGTTGGACTGCCCGGGGGTAGTCGCGG
TCACGCGTCTAGGCGGTGCTCGTAAGGTGCCGGTGTAGCTCACCATGTTT
GGATCCGCGTCCGGTTTCGGATTTATGCACACTTGCGGTGAATCACAAGA
GGTGGTGCGGTGAATGAGGAGGTATGCCCGTTCGTCCGCCTGTCGCGGGG
GGCTGACGTGCCGCCGCTCCTTGCATGCTCCTTCTTAGATATGGTAGGTT
TCAGGCGGAAGGAATTGCCGCAAGGGGGCTGCGCTCTCGTTGCTCGATTA
TCCTCCTGCTATTTGCGTGACGAGTTTTGATGTTGTGAGGGCGAATATTG
TACGGAGTATGTCCTAACCCTCACCCCACCACTGGATGTTTCGTACCGCC
CGTATCTCTCTCGTGTGCCGAACTCGATATGTGCGTTGTTCCAACCTAAA
AATGAAACAAAATTCCCCGACAAAGGTCTATGAATCTCTCGTGGTGAACG
AGTACCTGTCTGAGGCGTTCCCGCCTGGGGGAGAACACAACGCGTCCCCC
CTATTGCCTGAGGCACTAGCGGCTCGGGCCCAGGCGCGGATCATTGCCAG
CCGCAGCAACGATCTGGTGACAGCGTACTTCACCTACCTCAGCAATAAGG
ACGAGGTAAGCCATATGGGTTGGTGCAGAAAGTCTCCTGCGCCCGTCTCC
GTTTGTTTTTTGTGTGTGGCTGTGTGCGCTCCCCGTTTTTGAAACGAACA
TGTCCAAATCACCGACTTCTTCGAATAAAAGCGGCACTGTTTCGTCGCAC
TCCATCAAAGTCTTGTGGTAGAGATCCTCAAGCCCCGTTATCCCGTTGTG
CTTTGTCATGCCGATGCTGGTGCTCCTTGACAACTGCTGTTCAATAGGAA
AGAGGAGACGCGCCGATCAATGCACCCCTTTCAATAGCAGGATTCTCTGG
GGGGCGCCAGACGATTGAGCCGTTGCCATGTTCACATTTATCTTTCTTGG
CGTAGCTTCAGAATATCTAGTGGGCGTACAAGAGAGGAGGGTAAAGTTGG
AAAACCGGTGCTAGGGAGGGTTTTCCCATGCTTTATTTTTTATGGGCCGA
GCTTTGACACAAAAGCAACGCACCCTCCCAGGTGCACAAGACGATTAATG
AACTTTCAGGGTGCAAGGTCTTTGACAGGCCGTTGTATGGGATCCTTGAT
TCGGAGTGAATTATTCAATCTGCTCCCGAGTTTTCGCAGTGGCAAAAAAC
ACAATCAGACCGCGAAATACAAGAAAAAGTACGTTGTTTGCTTTGAAGAG
GGTCAACCGCGATCGTCGCCTCTAACCCTTTCCCTGTTGGAGAGCTTGTA
ACGCGAAGCTTGACAGATTATTGTAGCCAAGCGGATTCCTTCAAGCCTTG
ACAGACTCCTCCATTCCTCCGTCAGAGCATGAAGCTTTGTCAATATCCCC
AAGAGGAAGGCCTCTCCGCTCCTATCGATTCGCTTGGCCGCTTTCAAGCA
AAATAGTTCAAACAGGACGGAAGAAGCACCGTCTGAGACAAAATCCAGGA
AACGTTTTTGTTGAATTACTCATGATGAGGGTTCAATGCGCTAGCTTGGA
CGAAAGTATCGGGAGAAGCAAAATGTTGCGAGACTAGTCTTGCGAAAACT
GCCTTGCGAAAACTGCCTAGACTAAAGCAACAGAATCAGGGGGAGTCTCG
AGCTTTTTCTTCATCCCTCTTTTTGTTTCAGCCCGTCGCACAGGAAGCCA
AGTCTTCGGAGGACACGGGTTTTCTGGCGTGCATGCTTATCGTGTGTCTC
TGTGGATGAGCTCTTTCCATGGAAAAACACAGAAGGCTGGTCTCGCTTTT
CCTTCCCTCCTACATTGTACGTCCATAGAGAAATGGGTGGAAATTTCCCT
TCGTATGCGTCGTCCGCCGTTGCCAGGCACAAGAAGGCGAAAAGCGCGAG
AAGTTCGAGAAGGAGCTGAAAGCGCTTGACGCTTTTGCTGCCGCGGGGGC
AGGCGAGGGCGAGGCGTGCGGCTGGCTTTGTGGAGAGACTATGACGCTAG
CAGATGCCGCGTACTTCCCCTTTCTGGAGCGGATAGACGCGACGCTTTCG
CCTTTCAAGGTCTGATCGGCTTAAAATACATTTGGGCCTGCCTTCATTTG
GCTTCGATTGGTTTTCTTGGGTCGGTGGAGATGCGCGAGCGCACGTGTTG
GTGATCACGCTCTTCGGGCCAAAATATTGGTATGCTTGCATTCCTTCTCT
CACACTGTGCCAGCGGACGCCATTATGGGTAACGGTTGCTGGCTGCGTTT
GTGCGGCGGATAACCTGCTGTGGATGCCGTAGGCGGTCCCTTTCCTCGGA
TGTATGTACACCGCGCAAACGAACCCGTTGCGAGTTCGTTTGTATGGTAG
GGATGTTTTGGCTTCGCGTGCTTGGGTAGGAGATAATCCAGCTAGACATC
GGCGTGCATGTCCAATTGGTGCAGTCCTAAAACGAACAATGAAATCGGTC
GTCAGTGTCCGTTCTTCTGAGAACAAAACCCGGAGCTCGCCTGTTGGTAT
GTGTTCCTAGCGGGGGCGGCAATTCCTTCAGCGTGTATGTCGCACTTGCC
ACCGAGCGCTTCCGAAACCGACGAGGCCCCCCCATCCTTTCTTGTCACAT
ATCGTCCTCTTTTCTAAAACATTTATCTTCAGGGATGGTCTCTCAGTGAG
ATCGAATTGCCGGCGCTGGTGGCGTGGATAGAGAAGTGCCGCGCAAGGGA
ATCGGTGGCAGGCACTCTCCAAGACCCGGCCATGTGGGCGGAGCTGTACA
AGAAGTTCCTCGGGGTCAACTACTTCGAGAGGGCAGGGGTGGCCAAAAAG
TAGATCATCCGGACGCTCTTTTCTGCTTGTCGCCGCCCATATTTTCGATG
TTGTACATATTTGTTTTACGTCGGGTGTGCCAAGGGGTGTTACTCAGCTG
CGCTTCGACTGCGAGCACTTCGTAAGACCCCAACTCTTTCGATACAGCCT
CAAGTTTTCATGGATGAAAAGAGCTGATATACTTGTTTTAAAGGAGCCAA
GTAAAAGCCCTCATTGTTCCTGCTCCGAAGCCTGTTGAAGCACCAGCAAA
AGCCAAGCGGTAAAGTCGGGATAGGCCCCGTCGAGAGCACCGTCGCGCCC
AGCAGCGTCGAGGAATTGGCATAAAATTGTTGGGGTTAGACGATGCCCGG
GAAGGCACAGGGAAGCGATGGTACCTAGCTATGCTGCTGCAGCCGGGTTG
CGAAGGAGGCGCACCTCGACCGCTCTGTAGGCTTTGGGCGCCCGTCCATA
ACTTTGGGTGTCCGCTCCCTTGCTGTACGAATCCCCGCGGGACAACTCTC
CGCGCCGAGATTCCGAAACCTATCGGTCCATGTCTGCATTGCATCATCCC
GCGCTCGATCCTACTTTTTTGCTCTTGAACGGCAAGACTCGAACAACTGC
GATGTTATGCTCTGCTACGATGCACGCTGCGTCTTCGCCCCGTCTGAATT
TCTCCTCTGCGACCGTTCTTCAGCTGTGAAGGCGGCCGGCCCGCAGGGTT
TGCTTTCGTGAGTGTTGCCGATGCCTCAGGCAGGTCTGTAAAAGATAAGC
TGGTTCCGAGACTGCGTTCTGCCCCCATCGACAGGTCTTGCTGGTTGCAG
AGGAACCAAGGGAAGCATCTGTTGGTTCATTGGCGAGCGGATGTTGATTC
GTGCAAACTTAAGGCAGTAGGTGTTGTGTGGTTTTTGGAGGACGCGTTCG
GAAGTACTCAAGCGGACAGCAGCATTTTTCGACTCGACCACCTCACGATC
AACTAGAAAAGGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1065:21644..27956-

>mRNA_H-canaliculatus_F_contig1065.631.1 ID=mRNA_H-canaliculatus_F_contig1065.631.1|Name=mRNA_H-canaliculatus_F_contig1065.631.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1500bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1065:21644..27956- (Hapterophycus canaliculatus Oshoro5f female)
ATGCTCGCTGACGCTGATTCCGCAGCCAAGCCGGCGTTCACCTTGTACAG
CTCTGACAAGTGCCCCTATGCGCAGCGCACGTGATGCTCGCTGACGCTGA
TTCCGCAGCCAAGCCGGCGTTCACCTTGTACAGCTCTGACAAGTGCCCCT
ATGCGCAGCGCACGTGGATCGCGGCAAGGGAGCTCGGCGTGCCGTTCGAA
TTTCATGCAATGGGATCGCGGCAAGGGAGCTCGGCGTGCCGTTCGAATTT
CATGCAATGGAGCTGGGCAAGGACAACCGCGAGGATTGGTTTCTTAAGCT
CAACCCCCTTGGGAAGGTACCCACCGTTGTCTGCGGCGATGACGTGAGCT
GGGCAAGGACAACCGCGAGGATTGGTTTCTTAAGCTCAACCCCCTTGGGA
AGGTACCCACCGTTGTCTGCGGCGATGACGTGGTCTATGAATCTCTCGTG
GTGAACGAGTACCTGTCTGAGGCGTTCCCGCCTGGGGGAGAACACAACGC
GTCCCCCCTATTGCCTGAGGCACTAGCGGCTCGGGCCCAGGCGCGGATCA
TTGCCAGCCGCAGCAACGATCTGGTGACAGCGTACTTCACCTACCTCAGC
AATAAGGACGAGGTCTATGAATCTCTCGTGGTGAACGAGTACCTGTCTGA
GGCGTTCCCGCCTGGGGGAGAACACAACGCGTCCCCCCTATTGCCTGAGG
CACTAGCGGCTCGGGCCCAGGCGCGGATCATTGCCAGCCGCAGCAACGAT
CTGGTGACAGCGTACTTCACCTACCTCAGCAATAAGGACGAGGCACAAGA
AGGCGAAAAGCGCGAGAAGTTCGAGAAGGAGCTGAAAGCGCTTGACGCTT
TTGCTGCCGCGGGGGCAGGCGAGGGCGAGGCGTGCGGCTGGCTTTGTGGA
GAGACTATGACGCTAGCAGATGCCGCGTACTTCCCCTTTCTGGAGCGGAT
AGACGCGACGCTTTCGCCTTTCAAGGCACAAGAAGGCGAAAAGCGCGAGA
AGTTCGAGAAGGAGCTGAAAGCGCTTGACGCTTTTGCTGCCGCGGGGGCA
GGCGAGGGCGAGGCGTGCGGCTGGCTTTGTGGAGAGACTATGACGCTAGC
AGATGCCGCGTACTTCCCCTTTCTGGAGCGGATAGACGCGACGCTTTCGC
CTTTCAAGGGATGGTCTCTCAGTGAGATCGAATTGCCGGCGCTGGTGGCG
TGGATAGAGAAGTGCCGCGCAAGGGAATCGGTGGCAGGCACTCTCCAAGA
CCCGGCCATGTGGGCGGAGCTGTACAAGAAGTTCCTCGGGGTCAACTACT
TCGAGAGGGCAGGGGTGGCCAAAAAGTAGGGATGGTCTCTCAGTGAGATC
GAATTGCCGGCGCTGGTGGCGTGGATAGAGAAGTGCCGCGCAAGGGAATC
GGTGGCAGGCACTCTCCAAGACCCGGCCATGTGGGCGGAGCTGTACAAGA
AGTTCCTCGGGGTCAACTACTTCGAGAGGGCAGGGGTGGCCAAAAAGTAG
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