mRNA_H-canaliculatus_F_contig10570.556.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI) HSP 1 Score: 384 bits (987), Expect = 3.450e-126 Identity = 209/360 (58.06%), Postives = 253/360 (70.28%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTPFPEPGPNLQ-TRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHLSVKELYDSPDPTAMEEQQEEEEVESEGGVGID--STKRLVALKVVSALCECPAGLGGGCSHVAMVLFLARLLQMSPDELATFNPSTCTGRACAWIMKH 1071 GTL LSPLA+R+A GD+ TGREW PPL TA G++ AG + P + P + + +R DTNN+ GF+RLP E Y+ WTVP+LREFLSVFRCLD AGTSGF KA+L +++ D+V LIR G L NLAFRHPVPDL FEEKE LMP+LPA LRIKEW AMRRYLPE+SK+VI FL EVN LA G+R+WYR+ QRVLDMGNL+RFWAVP+ MW+GT AGAS+SADK+YRVR+ L V+ + ++ PT E E VG D S + LVAL+V++ALCECPAG+ GGCSH AM LFL RLLQMS ++LATFNP+TCTG AC WIM+H Sbjct: 263 GTLELSPLASRVARGDVCPLTGREWDPPL-GTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGTS--AGASFSADKEYRVRIKLRVEGVDENAPPTEQEXXXXXXXXEV---VGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH 616
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI) HSP 1 Score: 375 bits (963), Expect = 1.890e-120 Identity = 206/360 (57.22%), Postives = 251/360 (69.72%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTPFPEPGPNLQ-TRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHLSVKELYDSPDPTAMEEQQEEEEVESEGGVGID--STKRLVALKVVSALCECPAGLGGGCSHVAMVLFLARLLQMSPDELATFNPSTCTGRACAWIMKH 1071 GT LSPLA+R+A D TGREW PPL TA G++ AG + P + P + + +R+ DTNN+ GF+RLPA E Y+ TVP+LREFLSVFRCLDNAGTSGFNKA+L +++ D+V LIR G L NLAFRHPVPDL FEEKE LM +LPA LRIKEW AMRRYLPE+SK+VIL F+ EV LA G+R+WYR+ QRVLDMGNL+RFWAVP+ MW+GT AGAS+SADK+YR+R+ L V+E+ +S PT VG D S + LVAL+V++ALCECPAG+ GGCSH AM LFL RLLQMS ++LATFNP+TCTG AC WIM+H Sbjct: 331 GTSELSPLASRVARRDACPLTGREWDPPL-GTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTS--AGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXX---XXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH 684
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE) HSP 1 Score: 341 bits (875), Expect = 5.000e-107 Identity = 189/376 (50.27%), Postives = 246/376 (65.43%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTP---------------FPEPGPNLQTRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHLSVKELYDSPDPTAMEEQQEEEEVESEGGVGIDSTK----RLVALKVVSALCECPAGLGGGCSHVAMVLFLARLLQMSPDELATFNPSTCTGRACAWIMKH 1071 GTL S +A+ IA G++ TG+ WAPPL +T R +++ PGS P N ++R THDTNN+ GF+RLP A E ++ WTV QLREFLSVFRCLD+AG S + K L +L+ +V++I+K G L N AFRHPVPDL F++KE+ +MPELP R RI + ++++LPE+SKSVIL FL +VNP++ G+RVWYR Q+V+DMGNLNR W VP+K+ M+LG AGAS+S K Y VR+ L V+ L +S P+A EE+ G G++S + LVAL VV+ALCECPAG+ GGCSH AMVLFL RLLQM+ DELATFNPSTCTGRAC+WIM++ Sbjct: 371 GTLEFSSVASGIASGEVSPTTGQVWAPPLLET--------RIAQELRRATRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS--AGASFSDTKTYEVRIQLRVEALDESAHPSAAEEE----------GRGVESGQWPRPPLVALGVVAALCECPAGISGGCSHTAMVLFLTRLLQMTEDELATFNPSTCTGRACSWIMQN 726
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE) HSP 1 Score: 306 bits (783), Expect = 4.200e-93 Identity = 173/316 (54.75%), Postives = 216/316 (68.35%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTPFPEPGPNLQT-RTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHLSVKELYDSPDPTAMEEQQEEEEVESEGGVGID--STKRLVALKVVSALCECPAG 939 GTL LSPLA+ +A GD+ TG EW PPL TA G++ A + P P + +T R +TNN+ + GF+RLP E Y+ WTVP+LREFL+VFRCLDNAGTSGFNKA+L +++ D+V LIR G L NLAFRHPVPDL FEEKE LMP+LPA LRIKEW AMRR+LPE+SK+VIL F++EVN LA G+R+WYR+ QRVLDMGNL+RFWAV + MW+GT AGAS+SADK+YRVR+ L V+E+ ++ PT E VG D S + LVAL+V++ALCECPAG Sbjct: 576 GTLELSPLASGVARGDVCPLTGGEWDPPL-GTAQAKGQAAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGTS--AGASFSADKEYRVRIKLRVEEVDENAPPT---EXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG 885
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI) HSP 1 Score: 284 bits (727), Expect = 4.500e-88 Identity = 152/262 (58.02%), Postives = 184/262 (70.23%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTPF-PEPGPNLQTRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHL 783 GTL LSPLA+R+A GD+ TGREW PPL TA G++ AG + P + P + +R DTNN+ GF+RLP E Y+ WTVP+LREFLSVFRCLDN GTSG NKA+L +++ D+V LIR G L NLAFRHP PDL FEEKE LMP+LPA LRIKEW AMRRYLPE+SK+VIL F++EVN LA G+R+WYR+ QRVLDMGNL+RFW V + MW+GT AGAS+SADK+YRVR+ L Sbjct: 288 GTLELSPLASRVARGDICLLTGREWDPPL-GTAQGKGQAAGADAGRQKKKATPETASSRPSNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMREVNKLAGKGSRLWYRSLQRVLDMGNLSRFWTVQAAGSIMWIGTS--AGASFSADKEYRVRIKL 546
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI) HSP 1 Score: 220 bits (560), Expect = 2.530e-66 Identity = 121/256 (47.27%), Postives = 161/256 (62.89%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSTLPGSTP----------------FPEPGPNLQTRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLG 720 GTL S +A+ IA G++ TG+ WAPPL +T R +++ PGS P N ++R THDTNN+ GF+RLP A E ++ WTV QLREFLSVFRCLD+AG S + K L +L+ IV++I+K G L N AFRHPVPDL F++KE+ MPELP R RI + ++++LPE+SKSVIL FL++VNP++ G+RVWYR Q+V DMGNLNR W VP+K+ M+LG Sbjct: 32 GTLEFSSVASGIASGEVSPTTGQVWAPPLLET--------RIAQEFRRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMGNLNRLWGVPAKNGLMYLG 279
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI) HSP 1 Score: 208 bits (529), Expect = 3.980e-60 Identity = 120/252 (47.62%), Postives = 162/252 (64.29%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPLEDT--APISGRSGRNPAGSTQSSTLPGSTPFP---EPGPNLQTRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGA 741 GTL S +A+ IA G++ TG+ WAPPL +T A R+ R AGS G N ++R THDTNN+ GF+RLP A E ++ WTV QLREFLSVFRCLD+AG S + K L +L+ +V++I+K G L N AFRHPVPDL F++KE+ MP LP R RI + ++++LPE+SKSVIL FL++VNP++ G+RV Q+V+DMGNLNR W VP+K+ M+LG R V+ + Sbjct: 148 GTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEFRRATRR-AGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPAKNGLMYLGMRPVSAS 395
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI) HSP 1 Score: 187 bits (476), Expect = 4.050e-51 Identity = 102/200 (51.00%), Postives = 126/200 (63.00%), Query Frame = 1 Query: 220 DTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGASYSADKDYRVRVHLSVKELYDSPDPT 819 DTNN+ GF+RLP E Y+ WTVP+LREF+SV+RCLDNAGTSGFNKA+L +++ D+V +IR G L NLAFRHPVPDL FEE+E LMP+LPA LRIK A VLDMGNL+RFWAVP+ MW+GT AGAS+SADK+YRVR+ L V+E+ ++ PT Sbjct: 361 DTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRIKIAAA-------------------------------------VLDMGNLSRFWAVPAAGGIMWIGTS--AGASFSADKEYRVRIKLRVEEVDENAHPT 521
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI) HSP 1 Score: 125 bits (315), Expect = 6.000e-32 Identity = 61/115 (53.04%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 400 LIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQEVNPLADHGTRVWYRAEQRVLDMGNLNRFWAVPSKDESMWLGTRRVAGAS 744 +I+K G L N AFRHP+PDL F++KE+ MPELP R RI + +++LPE+SKSVIL F ++VNP++ G+RVWYR Q+V+DMGNLNR W VP+K+ M+LG V S Sbjct: 1 MIKKCGLLNSNQAFRHPIPDLSSFQDKERMAMPELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLGMSFVGALS 115
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 4.160e-31 Identity = 82/204 (40.20%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 1 GTLALSPLATRIAWGDLDARTGREWAPPL------EDTAPISGRSGRNPAGSTQSSTLPGSTPFPEPGPNLQTRTPATHDTNNFASDGFNRLPAAGERYSDWTVPQLREFLSVFRCLDNAGTSGFNKAVLTKLSADIVSLIRKSGHLGQNLAFRHPVPDLRPFEEKEKALMPELPAERLRIKEWVAMRRYLPEVSKSVILGFLQ 594 GTL S +A+ IA G++ TG+ WAPPL ++ + R G P G N ++R THDTNN+ GF+RLP A E ++ WTV QLREFLSV +V++I+K G L N AFRHPVPDL F++KE+ MPELP R RI + ++++LPE+SKSVIL FL+ Sbjct: 148 GTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMAQEFRRATRRPGSQPPXXXXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLR 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10570.556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10570.556.1 >prot_H-canaliculatus_F_contig10570.556.1 ID=prot_H-canaliculatus_F_contig10570.556.1|Name=mRNA_H-canaliculatus_F_contig10570.556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=357bp GTLALSPLATRIAWGDLDARTGREWAPPLEDTAPISGRSGRNPAGSTQSSback to top mRNA from alignment at H-canaliculatus_F_contig10570:2821..4634- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10570.556.1 ID=mRNA_H-canaliculatus_F_contig10570.556.1|Name=mRNA_H-canaliculatus_F_contig10570.556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1814bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10570:2821..4634- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10570:2821..4634- >mRNA_H-canaliculatus_F_contig10570.556.1 ID=mRNA_H-canaliculatus_F_contig10570.556.1|Name=mRNA_H-canaliculatus_F_contig10570.556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2142bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10570:2821..4634- (Hapterophycus canaliculatus Oshoro5f female)back to top |