Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 568 |
| Cds size | 378 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928650.3851736-CDS-H-canaliculatus_F_contig10217:1941..2319 | 1622928650.3851736-CDS-H-canaliculatus_F_contig10217:1941..2319 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10217 1942..2319 + |
| 1696845513.7262797-CDS-H-canaliculatus_F_contig10217:1941..2319 | 1696845513.7262797-CDS-H-canaliculatus_F_contig10217:1941..2319 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10217 1942..2319 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928650.3957589-UTR-H-canaliculatus_F_contig10217:2319..2508 | 1622928650.3957589-UTR-H-canaliculatus_F_contig10217:2319..2508 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10217 2320..2508 + |
| 1696845513.7444713-UTR-H-canaliculatus_F_contig10217:2319..2508 | 1696845513.7444713-UTR-H-canaliculatus_F_contig10217:2319..2508 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10217 2320..2508 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10217.235.1 >prot_H-canaliculatus_F_contig10217.235.1 ID=prot_H-canaliculatus_F_contig10217.235.1|Name=mRNA_H-canaliculatus_F_contig10217.235.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp
NKLQLERDSATRETRPKYIEVVDGNDLFFSRRVGGLFQLAMAFTTTMSRI
SPLLYALPPIPWCLKKDAKARLVVFPGSSGGSTPIPGATPRKIDCNFVLS
KADRATPPHSLMLAISSDFESFRKA* back to topmRNA from alignment at H-canaliculatus_F_contig10217:1942..2508+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10217.235.1 ID=mRNA_H-canaliculatus_F_contig10217.235.1|Name=mRNA_H-canaliculatus_F_contig10217.235.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=567bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10217:1942..2508+ (Hapterophycus canaliculatus Oshoro5f female)
AATAAGCTGCAACTAGAGCGTGATTCGGCTACTCGCGAAACGCGACCAAA
ATATATTGAGGTTGTCGATGGAAACGACTTGTTTTTTTCCCGCCGCGTCG
GCGGACTCTTTCAACTGGCCATGGCGTTCACCACGACCATGTCGAGGATC
TCCCCTCTACTCTACGCCCTCCCTCCCATACCGTGGTGCCTCAAGAAAGA
CGCCAAAGCACGCTTGGTCGTGTTCCCCGGTTCCTCCGGAGGATCTACGC
CGATCCCAGGCGCAACGCCCCGCAAGATCGACTGTAATTTCGTTTTGTCC
AAAGCAGACCGAGCAACACCTCCGCACTCCTTGATGTTAGCAATAAGCTC
GGACTTCGAAAGCTTCCGAAAGGCATGAGCCCCAAAATGGTTGGCAAGCT
GAACGCGAGTCTCCAACTGTTCAGGTGTTGGCTCAGGTGGTTTCTGCCCG
CTTGACGCGCTCTTACCCGATCGAACCTTGTCCCTAAGGGCCCGATTGTC
GCTCGTGTTGAGCTGGTCTCTGAGTGCGCGCGTATCCTTCTTGGCTTGCT
TCATGTGTGACTGAACT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10217:1942..2508+ >mRNA_H-canaliculatus_F_contig10217.235.1 ID=mRNA_H-canaliculatus_F_contig10217.235.1|Name=mRNA_H-canaliculatus_F_contig10217.235.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10217:1942..2508+ (Hapterophycus canaliculatus Oshoro5f female)
AATAAGCTGCAACTAGAGCGTGATTCGGCTACTCGCGAAACGCGACCAAA
ATATATTGAGGTTGTCGATGGAAACGACTTGTTTTTTTCCCGCCGCGTCG
GCGGACTCTTTCAACTGGCCATGGCGTTCACCACGACCATGTCGAGGATC
TCCCCTCTACTCTACGCCCTCCCTCCCATACCGTGGTGCCTCAAGAAAGA
CGCCAAAGCACGCTTGGTCGTGTTCCCCGGTTCCTCCGGAGGATCTACGC
CGATCCCAGGCGCAACGCCCCGCAAGATCGACTGTAATTTCGTTTTGTCC
AAAGCAGACCGAGCAACACCTCCGCACTCCTTGATGTTAGCAATAAGCTC
GGACTTCGAAAGCTTCCGAAAGGCATGAAATAAGCTGCAACTAGAGCGTG
ATTCGGCTACTCGCGAAACGCGACCAAAATATATTGAGGTTGTCGATGGA
AACGACTTGTTTTTTTCCCGCCGCGTCGGCGGACTCTTTCAACTGGCCAT
GGCGTTCACCACGACCATGTCGAGGATCTCCCCTCTACTCTACGCCCTCC
CTCCCATACCGTGGTGCCTCAAGAAAGACGCCAAAGCACGCTTGGTCGTG
TTCCCCGGTTCCTCCGGAGGATCTACGCCGATCCCAGGCGCAACGCCCCG
CAAGATCGACTGTAATTTCGTTTTGTCCAAAGCAGACCGAGCAACACCTC
CGCACTCCTTGATGTTAGCAATAAGCTCGGACTTCGAAAGCTTCCGAAAG
GCATGA back to top
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