Homology
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI)
HSP 1 Score: 102 bits (254), Expect = 1.020e-23
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 MGASDAVSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSATK 216
+GA AVSEEDLAPLV AAKKARAAGSTAPQVQ+LL AVDED+IGT+A G +ERVVAA +TTLADI+D+ATK
Sbjct: 840 IGAPAAVSEEDLAPLVLAAKKARAAGSTAPQVQQLLGAVDEDKIGTYAIGVKERVVAASETTLADIDDAATK 911
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
A0A6H5KSC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC2_9PHAE)
HSP 1 Score: 91.7 bits (226), Expect = 1.180e-20
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 MGASDAVSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSATK 216
+G AVSEEDL PLV AA+ R AG + VQKLLAAVDED+IGTHA GA++RVVAA++TTLADINDSATK
Sbjct: 23 LGVQAAVSEEDLVPLVKAAEFVRVAGGWSRMVQKLLAAVDEDQIGTHAVGAKDRVVAAVETTLADINDSATK 94
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
D7G0G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G6_ECTSI)
HSP 1 Score: 90.9 bits (224), Expect = 8.370e-20
Identity = 49/70 (70.00%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 1 MGASDAVSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSA 210
+G AVSE+ LAPLV+AAK+AR AGST+P+ Q+LLAAVDED+IG HA GA++RVVAA++TTLADIND+A
Sbjct: 363 LGVPAAVSEKYLAPLVSAAKEARLAGSTSPKAQELLAAVDEDQIGAHAVGAKDRVVAAVETTLADINDAA 432
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
A0A6H5KNS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS5_9PHAE)
HSP 1 Score: 90.1 bits (222), Expect = 2.150e-19
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 16 AVSEEDLAPLVAAAKKARAAGSTAPQVQK---------LLAAVDEDRIGTHAAGARERVVAALDTTLADINDSATK 216
AVSEEDLAPLV AAKKARAAGSTAPQV K LL AVDED+IGT+A GA++RVVAA +TTLADI+D++TK
Sbjct: 496 AVSEEDLAPLVLAAKKARAAGSTAPQVWKGDVPPQVRQLLGAVDEDKIGTYAIGAKDRVVAASETTLADIDDASTK 571
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
A0A6H5JKN0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN0_9PHAE)
HSP 1 Score: 58.5 bits (140), Expect = 2.770e-8
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 10 SDAVSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSATK 216
S V E+DL L +AAKKA+ AGST PQ+ ++ A ED +GT+A G +RV+AA +A + D+A K
Sbjct: 154 SSGVKEDDLRGLESAAKKAKTAGSTLPQIDAMVGAAREDNMGTYAEGLMDRVLAASKDAIAKVKDAAAK 222
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI)
HSP 1 Score: 55.8 bits (133), Expect = 2.500e-7
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 19 VSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSATK 216
V E+DL L +AAK+A+ AGST PQ+ ++ A ED++GT+A G +RV+AA +A + D+A +
Sbjct: 778 VKEDDLRGLESAAKRAKTAGSTLPQIDAMVGAAREDKMGTYAEGLMDRVLAASKDAIAKVKDAAAR 843
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Match:
D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI)
HSP 1 Score: 51.2 bits (121), Expect = 1.070e-5
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 19 VSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAGARERVVAALDTTLADINDSA 210
+S +D L +AAKKAR AG+ PQV++ + A ED +GT AAGA ER++AA + L IN S+
Sbjct: 841 LSSDDEYLLESAAKKARKAGACVPQVEQFVQAAREDGVGTFAAGALERLLAASEEALKSINASS 904
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10213.232.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 7
0 1 Expect = 1.02e-23 / Id = 79.17 Expect = 1.18e-20 / Id = 70.83 Expect = 8.37e-20 / Id = 70.00 Expect = 2.15e-19 / Id = 71.05 Expect = 2.77e-8 / Id = 46.38 Expect = 2.50e-7 / Id = 43.94 Expect = 1.07e-5 / Id = 48.44 Sequence D7G4Q7_ECTSI A0A6H5KSC2_9PHAE D7G0G6_ECTSI A0A6H5KNS5_9PHAE A0A6H5JKN0_9PHAE D8LMW4_ECTSI D8LHQ0_ECTSI back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10213.232.1
>prot_H-canaliculatus_F_contig10213.232.1 ID=prot_H-canaliculatus_F_contig10213.232.1|Name=mRNA_H-canaliculatus_F_contig10213.232.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=73bp
MGASDAVSEEDLAPLVAAAKKARAAGSTAPQVQKLLAAVDEDRIGTHAAG back to top mRNA from alignment at H-canaliculatus_F_contig10213:180..1261-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10213.232.1 ID=mRNA_H-canaliculatus_F_contig10213.232.1|Name=mRNA_H-canaliculatus_F_contig10213.232.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1082bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10213:180..1261- (Hapterophycus canaliculatus Oshoro5f female)ATGGGAGCCTCGGATGCCGTGAGCGAAGAGGACTTGGCCCCTCTCGTGGC
GGCGGCGAAGAAGGCCCGCGCGGCCGGCAGCACCGCTCCGCAG GTGTGTT
ATGTGGGTGGTGGTGTCCGGGATGCGTGTATGTTTGCTAAGATTGTTTGT
TCGGGAAGGGTAAGATGGCAAGCTACCTCTCGTTGCTGTTGTAGGTTTGC
GTTTGCGGACCCGGCTCGGCAAGCTCGTTCTCCTGGCACGTGGAGTCCAT
TTAACCATGGAAGGCTTCGTGGGCAGAAATTAGTCTGCTGTCGTGTTGCT
GTTCTGTCGTGTTCTGTTGTGTTGCAGCTTTACCTACCCGCGCGAGTTGC
TGCTCTCTCTGTCTCTCTCTGTATGATGGGTGCGTTTCTCTCTCTGTCTC
CCTTTCTCTCCAAGCTATCGTCGCCGTTGCTAGGGCCAAAGAAGGGCACC
CTGTTAATATTAAAAGGTGCTTACCGGCAGCAGCAAAAATGTTTACAAAT
TTTGTTTCTGGCTGCGAGTGCGCGTGTTGGCGTTTGGGAAGCAGGGAATA
ACACGGGTAACAATGCCCAATTGGCTCATGTGCGAATGCTAGCAGCAGCA
ACGATAGGAAGATGATGATATCGCTGATGCCTTCGAATCTAACCTGCTTG
TGTGGACGTGGAGGTGCCAAGTAAAGGTCGGAGATCAGCTCCCTTCCGCT
GTCCTCCCATCCCCGCCCAAGATAAACCGCAGTCTGTCCATCGGGAACCC
TTTCCTCGTCTCTTGGCTGTATCTTGGCATGCCGTCGCCCAGGGTCGCGT
TGTATTTTTGGCACAACGTGAGCATTTTCCGTCTCAAATATGGTGGGAGG
AACGAAATCTTGGGAGACGGCCTGTCGAAAAGATGTTGCCGTTCTGTCTC
CAACAACCGGCACGAATGTCGCGTTCTTTCAATTACTTCTGTCTCCGTCA
TGGCAGGTGCAAAAACTCCTGGCGGCTGTGGACGAGGACCGAATCGGCAC
GCACGCCGCCGGCGCCAGGGAGCGCGTGGTAGCCGCTTTGGACACCACGC
TCGCGGATATCAACGACTCCGCCACCAAGTGA back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10213:180..1261-
>mRNA_H-canaliculatus_F_contig10213.232.1 ID=mRNA_H-canaliculatus_F_contig10213.232.1|Name=mRNA_H-canaliculatus_F_contig10213.232.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=438bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10213:180..1261- (Hapterophycus canaliculatus Oshoro5f female) back to top