mRNA_H-canaliculatus_F_contig10201.221.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: D7FNY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNY9_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.340e-57 Identity = 119/132 (90.15%), Postives = 122/132 (92.42%), Query Frame = 1 Query: 1 MEAAQLPADALPPGWSSGGAGAADPESAQRXXXXXXXXXXRRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEEDSDXXXDDMM 396
MEAAQLPADALP GWSSGGAGA DPESAQR XXXXXXXXX RKQILDQIMTVEARLRLSNIAMVKP+KARRVEEML+HAA SG LGGKVTE QFIQMLEQVSSQMEKKTKVTIKRKTYFDE+DSD DDMM
Sbjct: 1 MEAAQLPADALPAGWSSGGAGAGDPESAQRKXXXXXXXXXXRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQVSSQMEKKTKVTIKRKTYFDEQDSDDNDDDMM 132
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: A0A835Z9S3_9STRA (Double-stranded DNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S3_9STRA) HSP 1 Score: 104 bits (259), Expect = 7.490e-23 Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 31 LPPGWSSGGAGAADPESAQRXXXXXXXXXXRRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEEDSDXXXD 387
LP G+++GG G DP++A + +R+ ILDQIM EAR RL+NIAMVK +KAR +E+ML+ AAK G LGGKV++ QF+QMLE VS+QME+KTKVT++R+ + D XX D
Sbjct: 6 LPEGFTAGGGGM-DPQAAAQKAQQEAAMEDQRRSILDQIMMPEARERLNNIAMVKKDKARALEDMLISAAKQGKLGGKVSQEQFVQMLEGVSAQMERKTKVTMRRRRNIGDSDXXXXDD 123
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: W7U6K2_9STRA (Programmed cell death protein 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6K2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.630e-18 Identity = 61/130 (46.92%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 31 LPPGWSSGGAGAA-------DPESAQRXXXXXXXXXXRRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKK-TKVTIKRKTYFDEEDSDXXXDDMM 396
LPPG+++ GAG + E + RR+ +LDQI++ EA+ RL+ IA+V+ EK R V++ML+ AA SG L GKV+E Q I+MLEQVSSQ++KK TKVTI+R+ DE D D DDM+
Sbjct: 9 LPPGFTAAGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLDE-DEDDNDDDML 137
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: F4PGL7_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PGL7_CAVFA) HSP 1 Score: 82.0 bits (201), Expect = 3.380e-15 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 67 ADPESAQRXXXXXXXXXXRRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEE 366
ADPE+ QR RR+ I+ QI+T +AR RLS IAMVKP+KAR++E+ML++AA++G L KV E + I +LEQ+S + KKT V +KR+T D++
Sbjct: 12 ADPEAQQRAMEQKREQEERRQHIILQILTHDARERLSRIAMVKPDKARQIEDMLVNAAQTGRLSEKVDEQKLISLLEQISEKA-KKTTVIMKRRTIEDDD 110
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: L1IJB7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJB7_GUITC) HSP 1 Score: 82.4 bits (202), Expect = 5.880e-15 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 70 DPESAQRXXXXXXXXXXRRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDE 363
DPE + +R QIL I++ +AR RLSNIAMVK +KAR+VE+ML+ A+ GA+GG++ E Q I+MLE ++ Q EK+TKVT +R+ D+
Sbjct: 44 DPEQQKAQQERQKAAEDQRTQILKAILSPQARERLSNIAMVKKDKARKVEDMLIMNAQRGAIGGQIDEAQLIEMLESINEQTEKETKVTFQRRRIDDD 141
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: A0A3Q1FVP5_9TELE (Programmed cell death 5 n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1FVP5_9TELE) HSP 1 Score: 79.3 bits (194), Expect = 3.920e-14 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 124 RKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEEDSD 375
R IL Q++ AR RLSN+A+VKPEKA VE L+ A+ G LGGK++E I++LE+VS Q EKKT VT R+ D +D D
Sbjct: 35 RNSILAQVLDQSARARLSNLALVKPEKANAVENYLIQMARFGKLGGKISESGLIEILEKVSQQTEKKTTVTFNRRRVMDSDDED 118
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: A0A8J8NIJ5_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NIJ5_HALGN) HSP 1 Score: 77.8 bits (190), Expect = 6.490e-14 Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 124 RKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVS-SQMEKKTKVTIKRKTYFDEEDSD 375
RK IL QI+T EA+ RLSNIA+VKPEKA ++E +L+ A+ G + GKVTEGQ I +LEQVS S+++ T + +RK + D++D D
Sbjct: 5 RKAILGQILTNEAKERLSNIAVVKPEKAEKLEMLLIQNAQRGKIQGKVTEGQMIDLLEQVSESEVKPATTIKFQRKRFDDDDDLD 89
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: L8GJP2_ACACA (Double-stranded DNA-binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJP2_ACACA) HSP 1 Score: 78.6 bits (192), Expect = 7.910e-14 Identity = 42/82 (51.22%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 121 RRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEE 366
RR+QIL QI+T EAR R++ I++VKPEKAR+VE+M++ AA+SG LGGKV E I +L+Q+S + + TK+T +R+ + +E
Sbjct: 43 RRRQILAQILTAEARERMARISLVKPEKARQVEDMIIGAAQSGQLGGKVNEANLISLLDQISEKQQH-TKITYQRRKWDSDE 123
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: A0A6P6UGC6_COFAR (DNA-binding protein DDB_G0278111-like n=11 Tax=Pentapetalae TaxID=1437201 RepID=A0A6P6UGC6_COFAR) HSP 1 Score: 78.6 bits (192), Expect = 9.040e-14 Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 121 RRKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEED 369
RR+ +L QI+T EAR RL+ IA+VKPEKAR VE++++ AA+SG + KV+E + I +LEQ+++Q K+TKVTI+R+ E+D
Sbjct: 45 RRQMMLSQILTSEARERLARIALVKPEKARGVEDVILRAAQSGQIAEKVSEERLISLLEQINTQTTKQTKVTIQRRRSVLEDD 127
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Match: A0A3Q3A936_KRYMA (Programmed cell death 5 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3A936_KRYMA) HSP 1 Score: 78.2 bits (191), Expect = 9.430e-14 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 124 RKQILDQIMTVEARLRLSNIAMVKPEKARRVEEMLMHAAKSGALGGKVTEGQFIQMLEQVSSQMEKKTKVTIKRKTYFDEEDSD 375
R IL Q++ AR RLSN+A+VKPEKA+ VE L+ A+ G LGGK++E I++LE+VS Q EKKT VT R+ D ++ D
Sbjct: 33 RNTILAQVLEQSARARLSNLALVKPEKAKAVENYLIQMARFGQLGGKISESGLIEILEKVSQQTEKKTTVTFNRRKVMDSDEED 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10201.221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10201.221.1 >prot_H-canaliculatus_F_contig10201.221.1 ID=prot_H-canaliculatus_F_contig10201.221.1|Name=mRNA_H-canaliculatus_F_contig10201.221.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=133bp MEAAQLPADALPPGWSSGGAGAADPESAQRQAQQEQQEQERRKQILDQIMback to top mRNA from alignment at H-canaliculatus_F_contig10201:1526..5021+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10201.221.1 ID=mRNA_H-canaliculatus_F_contig10201.221.1|Name=mRNA_H-canaliculatus_F_contig10201.221.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3496bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10201:1526..5021+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10201:1526..5021+ >mRNA_H-canaliculatus_F_contig10201.221.1 ID=mRNA_H-canaliculatus_F_contig10201.221.1|Name=mRNA_H-canaliculatus_F_contig10201.221.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=798bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10201:1526..5021+ (Hapterophycus canaliculatus Oshoro5f female)back to top |