mRNA_H-canaliculatus_F_contig1019.211.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1019.211.1

>prot_H-canaliculatus_F_contig1019.211.1 ID=prot_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=296bp
MMVATLPPQKGERTTSSFFRETRDLPRFEEHGYVSRHVSEKSLEAAWQAR
VRYHNMNGRPRHSKRVLEWNGHYVLYDLHLPPGTSLPVSAMHGGSIAGGS
SSASGTISMNSSRSNSSESSESSGTEGSSTGHEGPPLPEHEQKSDKGSPA
TSACKRRTVFRSNGGLVSPNGRYTFVQHNDNELVIYDREGGKIWSCPGSK
AVDVRNPEAEKEMNTVFTEFQHDGALVQYAERKSKGWGGQGKEVLWRSHS
AGPPNGDRLVMQDDGNLVIYNSKTLEVAWESGTAEEGGPNRIILR*
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mRNA from alignment at H-canaliculatus_F_contig1019:975..6845+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1019.211.1 ID=mRNA_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5871bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1019:975..6845+ (Hapterophycus canaliculatus Oshoro5f female)
GACCAGCTTTTCTGGCGTCGTGTGTTGCAAAAATAAGAGGGCACGGCTTG
AGTTTCTGCGGGGTAGACTTGCAGCTCACCAACTGCACAATTCTCGCCCA
CGCAAGATTTTGTCGGGCGACGACTAGTATAGCCTACAGAGAGAGGTCGT
CGCCCCGCCTTTGGAGTTCAGGTCCAGTCCTACGTATACAACGAGTCTCC
ACCAAACTATCATTCGCGCGTTTGGTCTGCATCGGGCTCGCTGGCGTCTC
GAGATCTATGCCCGTGAAGACACATAGAGGTAGAATCGCCAGGCTGCGTA
GATTTTACTAAGTAACAAGTCGCACAATCTCGGTACCGGTACGAGGGATC
TGTATGCCTTTTTCGCAAGTGTTCGATTCTCCCGGCCTGACCTGTCGGGT
ACGTTACGTAATCGTCTGGAAAGTGCCGGTCGGAATACTGATGACCAGCC
AGAGTTAGAAGAACGTCCTGTTGGCCGGTTTTTGTGGAATTTGACGGGGC
GACCCCAACAAGTAACAGGGGGCACAGTGCCGGGATGGCGTTGTACCTTT
TCCTGGCATTTGTTTTCAACCGAAAAGAGTTTCCCACTCGCCCTTTCTCT
GTTTCCTACTCGCCCTTTCTCTGTTTCTGCTCATTCAACTCACAACCCAC
TCCTTCACCTTCCACGTCTGTCTCTCGCTCTTATCGGGAAGTGCGACATC
ACGGAAAATAAAAGGCTCGATAAAAGGAGATCGGTTAGTCATGATGGTCG
CTACGCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTCTTTCTTCCGA
GAAACAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACGTGAGCCGTCA
CGTGTCGGAGAAGTCCCTTGAAGCAGGTATGAGCAGCCAACTCTGCATTG
CCCCCCAGCCGGAGCGTGCTTCACCAGCACGTCCGGGTCTTCGGCGTGTT
CACCGTGTTGGCCTCGCAGCAGCGTTTGTTTAATCCACGCGAGGGGTATC
GCACGTGTTCCATCCGCGAGACTCCATCGGACAGAGAGGTGTACTTCCAC
ACACCAGCGTCGCAGTTGCTGTGTGGTTGCACTTCACCTGACGAGACCAT
ATGTATCGTCGTACCATGATCCAGGCTGAGCTAGCAGAACCTTGGAGATT
CTCTTCAACTGTTTCAAGAGAGCAATGCACGATGTGCATCAGGAATCCCA
TTGATTCTCTTCGGCTTTATCTTTCTCTGCGCCATCGTCGTCCTTGCCAA
ACTCGTCGACCCAAGCCACACCAGCCCCATCGCTTACAAGTACTCTGTTC
AACTCCACTCAGCTTGGCAGGCTCGTGTGCGGTACCACAACATGAACGGA
CGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCCACTACGTTCT
GTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTCAGCGCGATGC
ACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGGCACCATCAGC
ATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAAGCAGCGGGAC
TGAAGGTTGTGATATTGTTGTGACGGCGATGAGATTGAGTTGAGTCAACG
TCTCTGATAGGATGGAAAAGGTTTGCATCGTTGAACCGTCAGAAGAGGTT
TGAACGCGTTCCGCGACATTCAGAGCATTGTTCCCGCTCCAGCGAGGTTC
CTCCAGCAGCGACTGGAGGGCGCGCGTTTCTACCCCGCTCCTAGAAGTGG
CTTGGTCGCTAGAAGGAAGTCGATTGCGTGAAGTCCGGGCGGTCAGCTTG
TGCCTTTTTTTGACTCGTTGCTTCATCGCTGCGCGTGCAGGTAGCTCGAC
TGGGCACGAAGGACCACCGCTCCCGGAACACGAGCAGAAGTCCGACAAGG
GATCGCCGGCGACAAGCGCGTGCAAACGGCGTACTGTTTTCCGCTCCAAC
GGCGGACTTGTGAGTCCTAACGGGCGCTACACGTTCGTGCAGCACAACGG
TGAGTACGCACGTCCTTCGCGCGTTAGAGTAGAACGACCGAAGGAGAATA
ATTCTCAAACATTTCTCCGGCTGCAATTTTGTAGTCTGCGAACCAAGTTG
AAGTGCGGTGAGTTTTCTGGTGTGAAACTACAGACCGCCGTCCACGACAA
AACAAAACTTTGCACGCTGACATCTTTGGGGTTATGAGCGCCGGCTTATG
TGTCGTTGCCGTGTAGCACGAACGAATGTCCTTTAACGCCAGCCGGCGAA
GTACGTGCCCAACCGCACGCCTTGCTGCAGACTGGCGTATCTGGCAACGT
CCAACGCCACTCGTAGACACATCTCTGTACGTGCACCGCGAGGTCGCTTT
TTTGCCGTTTGGTGTGCCGAGAACTACTTGTTATGATCGTGTGACTTAGA
CGTTGGAAATGCTTCTGCACTTCCACCTCCCGCCTCAATACATCAACCGT
TCACTCTACCCTTGCGCAAAGACTTTCCTCGTTGCCAACCCGCCTTTCAC
CAATCCACCGTCAACCTAACACCCGTCGAACGCCCAACAGGTACACTCGC
CGTTGCGATGACGAATTAGGCGAAGAATCATCGAAAACGTTCTCTACCCG
TTATCTCCGCATCTCCACCGCCTTAGGAGGTGCTCCGCCCGTATCTGCTG
ACAAAATCGCGACCCTGCTTCGCCGTCTGAGTGCCTGCCCAGGGTAAAAT
ATTTCACTGCGTTGTCATCTGCCCCTCCTCGTTGCGCTCACGACACCCGT
GGACGGTATCGCGAATAAACGCTCCCGGGAAATGACACGCATTTATGAAC
ATCCCATCAGGGACCTTGCCGCAGCGAAGCGTAGGTCAATGAGCCACACG
TTTTCATATTTTTTACCGGATACGTTTCACGTGTACACTTTTATGCATAG
CCGCCTCCTTGCCGTTTGGTGCGAGAAACATCCCGCTCTGGGTCAGTAGA
AGTCAGCAGGAATAGGCATTAACGAGGTGATGGGGCCGTCCATTGTAGAC
AATGGGAAGATGCCCCGGCCAGCCATAACTAGTCGTTTCTTTCTTTGTGA
GCAAATCAGTCCAAAATACTCTTCCTTCGACACAGCGTCTCATTAGCTTC
AGCCCTCAGAACAATTGCCAACATGTAGTTTCCTCTAAGTCAACCCGGAA
CTCCGAGGGGTCGTTCCAAGCCGATCTCGTTGTTCGGTTTACACCGAAAC
CTTGCCAGCGTTAATGAACCCCCTACCACGGTGCACACATTTATTCTCAT
TCCTGTGTGTACATCTTGCGTCAATTCTCATCCGATGCCACCGACGTCAC
CCTATCTCATGTCCGACGCCGTCCACTGCCCCTCCAAACCTTGATCGGCG
TTTGGACGCGTGTTTCGTTGTTTCCACCTCACTCACGAACCAACCTGAGC
AGACAATGAGCTGGTCATCTACGACAGAGAGGGGGGGAAAATTTGGTCCT
GCCCTGGGTCGAAGGCGGTTGACGTCAGGAACCCCGAGGCGGAGAAGGAG
ATGAACACGGTCTTCACGGAATTCCAGCACGACGGTGCACTCGTGCAGTA
CGCCGAGAGAAAGAGCAAGGGCTGGGGGGGGCAGGGCAAAGAGGTGCTCT
GGCGAAGCCACTCTGGTGAGCCGCAACGAACGTCCCGGAAGCACCATGGG
GCTGGACACTAGCGAACGGCAGTCAATCAGCGACGAACGGACGTAGATTT
GCCAAAGTGCGACAAAACTCACCTAACTTTTCGCCCGTAGCCGCAGCACT
TGGTTGTGGGACCAAATGAGGCAGTAGCTGATGATTGCCAGAAAGGAGAG
TATCGTCTCGCAACCCCCTCTTCCTAGTTGTCTCTGCCGGGAACATAGAG
TGCGTCTCCGATGATTACAAGATAGTAGCCTGTGGAGTGTCAAAGTGTTC
CTCTCCGGAGACGTTGTTGAATTGTCCAGCTAGAAGAAGCGGAGAAACAA
CAGCGGCCGGCCGAGAAACACTCTTCCCATCATGAACTCATCGCCGCAAA
TAGATAGGGTTGTTTTCGCCAGACGCGCACGCCAGCTGGCGAATCACGCA
AGTGCTGTGTGCGTGCGTTTGCTTTTCCTCACAAGTTCGTGCTGAAGTGG
GCCACTCTCACGCAGCGAAAATATTGGCATCTCAAGCCACTATGATTGAA
GAATAGTTCGAAAGTAATAATTTTTTCATCCCTTCTTGTTTGACTTGGTT
CGACCAACACGCTCCTGTCGACAGCAGGTCCGCCGAATGGCGATCGTCTG
GTGATGCAAGACGACGGCAACCTGGTCATTTACAATTCCAAGACACTGGA
AGTGGCGTGGGAGTCGGGAACCGCCGAAGAAGGGGGACCCAACCGCATCA
TCCTGAGATGACACCGACGCATACTTACCAGGAAGTGAAAACAGATCCTG
ACTGTTGGGCGAAGGAAGATATCGTCGTCGCAACTTCCATGTCCGTCAAG
CTCTCATCGGTCGCTAGACCCTTTTTTTTTTCTTTTTTTTTGAGTGAGAA
TTAATAAAGTTCTCAACTTCGTACTGTCCTCTCCAAAGGCTTGACCCTAA
AAGGCGGCACAGATTTCAGGAACTCCGGTTGTGTTTGATTCATGCGGAAA
GTCGCAGCACAACACAGGTACATGGTGGTTGAGAAAGCATCTTCTCCTGG
CACACGTAGTGAGTCGCGTTTATATTAATTAACAAGATTTTCGCTTTCCG
CTGGCATTAGGTAATACATGCAGATATATATCAATAACAACATTCACCAT
TTGACGGGAAATTCGATAGATAGATTCATTGAAGGCCTGCCTTGATTGGA
GTGCCGATCATGTTTGGTTGTGCCTATTTCTGTTCTACGTGCCCCGAGGC
TGCCCCGAGGCTGTGGTTCCCATCCTCCACCTGGTGGGTTTCATGCAAAA
AAAAAGAATGTTTCTAGCTGAGTATTCAGGGAATACTTGATCAATAGGAG
ATATTCATACTTGATCTGTTGGGTGGTTGGTCATTTTGTTTTTTCGCCAG
TTCGCTCGGGTCTTGTTATTGTCTTCATGAGAGAACAAACGAAAGGTTTG
TTTTTGCCATGCACAAAGACTCGTACAACGGACGGTCGAGGAATCACTTT
CACACAACGATTTCTGTAGATGACGACGGAACGGTCCATTGTTTGATTAT
TTAACAGGCTACCCCTTGAATTGGCCCGGACTCTGTAACATAGACGGAAA
AAGGGCCGAAAAATCGAGTTGCCGAATGGTTCTCCGCAGGCGTTTTTCGT
TCGGCCATCGGATGGCATTTTCGAAGTCCTCAACGAAGCATGGCATCGCT
GGGCAATTTTCGATACTTGGTTGGTGTTTCCAGGGGGTTGTTAAAAGCTG
ATCTACTGGTTCGGTTGTGTCATCCAATCCATAGCAAAGTACGGGCTACC
TTTGAGGGTTAAAGGCGTCATTGTGTGTTGGTGCTATGTTCGTTGTCCTG
ACAGCATTTAGACGTCGGTGACGTCGCAATTTTTGTTGTTTGTCTAGTTG
GTTGACATATTGATTTGTCGATCGGCTGGTTGCCTTGTTGGTTCTTTGTT
TTGAAGGGTGTTTAGGTGGGGGTTCGTCCGCTTGTAATGTGGCCGTCCGT
CCGTCCGGTCGTTCGTTCGTCCATTGGTTCGTCCCTCCGGCCGTTACGTT
AGTCTGTTCGCGCGGCGGTTGGACGGTTGGTTACTGTCGTTCAAGTCGTT
GCCTACTTAATTTCAAGTGAGCCTGCGCACGGTCATGGTCGCTCAACTGA
AAATCGTTGGCTTCTTGGCCGTCGCAGACGACCCGACCCGCCCGCTCTCC
GTACCCTTATATTTATTCACGGTTTTTGAGAAAGCCGCAGGGCGTCCATG
CTCGTACACGCTCATATGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1019:975..6845+

>mRNA_H-canaliculatus_F_contig1019.211.1 ID=mRNA_H-canaliculatus_F_contig1019.211.1|Name=mRNA_H-canaliculatus_F_contig1019.211.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1776bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1019:975..6845+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATGGTCGCTACGCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTC
TTTCTTCCGAGAAACAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACG
TGAGCCGTCACGTGTCGGAGAAGTCCCTTGAAGCAGATGATGGTCGCTAC
GCTTCCGCCCCAGAAGGGAGAGAGGACAACCTCCTCTTTCTTCCGAGAAA
CAAGAGACCTACCGCGCTTCGAGGAGCACGGGTACGTGAGCCGTCACGTG
TCGGAGAAGTCCCTTGAAGCAGCTTGGCAGGCTCGTGTGCGGTACCACAA
CATGAACGGACGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCC
ACTACGTTCTGTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTC
AGCGCGATGCACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGG
CACCATCAGCATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAA
GCAGCGGGACTGAAGCTTGGCAGGCTCGTGTGCGGTACCACAACATGAAC
GGACGTCCCCGGCACAGCAAGCGCGTCCTTGAGTGGAACGGCCACTACGT
TCTGTATGACCTGCACCTCCCGCCGGGTACATCTCTTCCGGTCAGCGCGA
TGCACGGCGGAAGCATCGCTGGCGGCAGTAGTAGCGCTTCAGGCACCATC
AGCATGAACAGCAGCAGAAGCAACAGCAGCGAAAGCAGCGAAAGCAGCGG
GACTGAAGGTAGCTCGACTGGGCACGAAGGACCACCGCTCCCGGAACACG
AGCAGAAGTCCGACAAGGGATCGCCGGCGACAAGCGCGTGCAAACGGCGT
ACTGTTTTCCGCTCCAACGGCGGACTTGTGAGTCCTAACGGGCGCTACAC
GTTCGTGCAGCACAACGGTAGCTCGACTGGGCACGAAGGACCACCGCTCC
CGGAACACGAGCAGAAGTCCGACAAGGGATCGCCGGCGACAAGCGCGTGC
AAACGGCGTACTGTTTTCCGCTCCAACGGCGGACTTGTGAGTCCTAACGG
GCGCTACACGTTCGTGCAGCACAACGACAATGAGCTGGTCATCTACGACA
GAGAGGGGGGGAAAATTTGGTCCTGCCCTGGGTCGAAGGCGGTTGACGTC
AGGAACCCCGAGGCGGAGAAGGAGATGAACACGGTCTTCACGGAATTCCA
GCACGACGGTGCACTCGTGCAGTACGCCGAGAGAAAGAGCAAGGGCTGGG
GGGGGCAGGGCAAAGAGGTGCTCTGGCGAAGCCACTCTGACAATGAGCTG
GTCATCTACGACAGAGAGGGGGGGAAAATTTGGTCCTGCCCTGGGTCGAA
GGCGGTTGACGTCAGGAACCCCGAGGCGGAGAAGGAGATGAACACGGTCT
TCACGGAATTCCAGCACGACGGTGCACTCGTGCAGTACGCCGAGAGAAAG
AGCAAGGGCTGGGGGGGGCAGGGCAAAGAGGTGCTCTGGCGAAGCCACTC
TGCAGGTCCGCCGAATGGCGATCGTCTGGTGATGCAAGACGACGGCAACC
TGGTCATTTACAATTCCAAGACACTGGAAGTGGCGTGGGAGTCGGGAACC
GCCGAAGAAGGGGGACCCAACCGCATCATCCTGAGATGACAGGTCCGCCG
AATGGCGATCGTCTGGTGATGCAAGACGACGGCAACCTGGTCATTTACAA
TTCCAAGACACTGGAAGTGGCGTGGGAGTCGGGAACCGCCGAAGAAGGGG
GACCCAACCGCATCATCCTGAGATGA
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