mRNA_H-canaliculatus_F_contig10131.157.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10131.157.1

>prot_H-canaliculatus_F_contig10131.157.1 ID=prot_H-canaliculatus_F_contig10131.157.1|Name=mRNA_H-canaliculatus_F_contig10131.157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=577bp
MSEGREAMTRDHRSSSSGNISINSAKGPRGTGDAKAHVPWVSSRLVVECA
VTNTWRLPVVWELVSGHLRVVAKAREPAKREYAVRALRELIVDGVQRLHP
VPSGAPSAANPASASASAKVGSTGDANSAASREANGGGGGGGGGGGGGGG
GGGRSSSRGGGGGGGGGGGSTVLPPPPPGGANGGVQEEGFLPTFLGLRAR
LEGAVGGGEDGPFRWVFDCGGVGGVFSAAGEKGTRRRMSTRLDGGGDAFE
GVLFKTMGLFALTPHVDTREATLQTLFSILQSCGQALDSAWPVILDLLHS
VARGATATAVPPSPRTPPSAAAAFGGGGEARGRGHGGGGGEEEEEEGGSG
AGTRPVVWGGACLSLAFKCLQLVVDDFLERVPREQVPRLVTCAGAFGGQT
ESVNLSLTAIGMLWTVCDTFADAVAASAPASAAGGVGGEAGEGLRQSLSS
SPPYSPPPGESKRVARSSLHSMWPTMLFELRSLAVDFRPELRNCAVNTLF
SAAVGNGDGLSEADWKQFLLEVTFPLIEQVLESTNSASSGANTAVAPELK
KGVRMLMHHTRDTDQKQWNETRVLAMQ
back to top

mRNA from alignment at H-canaliculatus_F_contig10131:594..4735-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10131.157.1 ID=mRNA_H-canaliculatus_F_contig10131.157.1|Name=mRNA_H-canaliculatus_F_contig10131.157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4142bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10131:594..4735- (Hapterophycus canaliculatus Oshoro5f female)
GCACGCAGGGGGGTCGGGGCAGCAATGTCCGAGGGTAGGGAGGCCATGAC GAGAGACCACCGCAGCAGCAGCAGCGGCAACATCAGCATCAACAGCGCAA AGGGGCCGAGGGGCACGGGGGACGCCAAGGCTCACGTCCCCTGGGTGTCG TCCCGCTTGGTGAGTGAACCATCGAACATGCCACGCCCTGAGTTCTTTGG TAACGCATCGTGGCCTGCTTGGATTCTTTTTGTTGGTCAGTGCGCGGAAT CTACGCTGCGCGACGCGCCACTAGTTGCTTGTTGCAAAAACGTGTTGTCA GCCGTGTACTTCCAAACTGAGATGGGCCTTCATGTTGCTCGGGGGACTGT CGGGAACTTGTCGCCATTCTACGTGTTTGTTTTGGCGTCGTTTCCCGTCG GTCTCCCGCTTCCCGTCGTCTCTCGTCCATCCTTCTTTCGGACGGCGCTT CTGCCGCTGTGTCTCGTGTTTTGTGTCAGCCTTTCTGTCTGGTTCTACCC GCCTGTCCGCCCGTCCGTCTCTCTCTCTCTCCCTCCCTCTCTCTCTCCCT CTCTCTCTCTGTCTCTGTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTTGTCTATCTGCCTCGTGGGCGTGTCGCCCGTGCCATCT GCATCAAAGCACCTCCCGCCTGCCACGCTCCCATCTACCGTACCAATCGA GCTGGTCCATCGAAAGCACCAAGCGAACCCTAACTCCGAAGTCGTCGTAC CTACCCACCGACGCAGGTGGTCGAGTGCGCCGTCACCAACACCTGGCGCC TCCCGGTCGTGTGGGAGCTCGTTTCCGGACACCTCCGAGTCGTGGCCAAG GCAAGGGAGCCTGCCAAGCGGGAGTACGCCGTGCGGGCGCTCCGTGAGCT CATCGTGGACGGCGTGCAGAGGCTCCACCCCGTCCCCTCCGGCGCCCCCT CCGCTGCAAACCCAGCCTCCGCCTCCGCCTCCGCCAAAGTCGGCTCGACC GGCGACGCGAACAGCGCCGCCTCTCGAGAAGCCAACGGCGGCGGTGGAGG CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGGAGCAGCA GTCGCGGCGGTGGCGGCGGCGGCGGCGGTGGCGGCGGCTCTACCGTGCTC CCCCCGCCGCCGCCCGGCGGTGCGAACGGTGCCTCGGCTGTTGCCACGGC AGCAGCCAGGGTCGGGACGACGGGGGCAACGAAGACGGCGACAGATACGG CGGCGGCGGCGGCGGCGGCAACGGCCGCCGTTCGAGCGGCCGCCGCGTCC TCCGCTCCTAGCGGACAAAGAACCAGTGCTCCGCCGACGAGCACGGGGAA TTCGGGTGGCGGGGGAGGGGGCGTTCAGGAGGAGGGCTTCCTACCGACTT TCTTGGGGCTGCGAGCGCGTCTGGAGGGGGCGGTGGGGGGAGGGGAAGAC GGGCCGTTTCGATGGGTGTTTGACTGCGGCGGCGTGGGTGGCGTTTTCTC GGCGGCCGGGGAGAAGGGCACGCGGCGGAGGATGTCGACGAGGCTGGACG GCGGGGGCGATGCGTTCGAGGGGGTGTTGTTCAAGACCATGGGGCTGTTC GCGCTGACGCCTCACGTCGACACGCGGGAGGCCACCCTGCAGACGCTCTT CAGCATATTACAGGTGACACCGGTGTGGATCGCGCAAGGGTGCTTGCGCT CTCTATCGCTGTTTGGCGCAGATAGCCCTCCCTTTTTTTTTGGTCGATGT TCGCGCTCTGTTCGACGTCCGATGGGTGTTTTCGTATAGTTGTTGTTGTC GTCGTCGTCGCTGTTGTTGTTGTTCTGTATCGTGGAATCACTCTCCTGGT AAAGGTAGCCCATTTAAAGCTACAAGAAATGGCCGGGCCGTGTATCGAAA CGTGGAAGACGATAAAACACAGTCAGACGTACAGATTTCTGTCTCGCCCC GAGTCTGAATATGCTGTTGGCCCTGGTACGGTCGACCTCTTCATCTTTGC CCTGCTCGGGTGAATGGACGGCGGTAGGAGCGGTAGGAGCGTACCCATAC CCTGCAAGCTCTCTTGCCTCACGCCGTCCGAATTGATTTTTCAATTCGAG GGCTGTCAATAGAGATAGACCTACGACCGAGGAAGGCTGACGGCAAACGC TTCACGGAGCCAGCTATCCGCTGACGTGTTTCTTCTCTGGTACGGCGAGC GCACGCGTGCTCATTGCCGAGGGTCCTACGCCCACGCAAAGCCTCGGGGC CTACGGTCTCGAGTTGACCCTCCTTGCCATTCATGTGCCTGTCCCGTGTT CCATCGATCAGTACGTGTCAAGGTTCTGCCTGATAAGATGCGGGTATCTT GGGCCGGGCATAAGATTCCTTGTAGACCTTGCCAAATGGCCGGTTAGGGT ATGGGGTGTCATAACAAGACTTCCCAAACGGCCGGGTGAGATACGGGATA CCGCACAAAACTTGGCAATCGGCCGGGGTGGGTAGATACTAAACACCCTG GTATTTCACCCGGGGTACACTTCGTAGAACCCCTACCAAGCATGTTGAAA ACAACACGCTGCCAACACGTCTACCGAACAACTATCTGTCGAGGCTTGAA CGCCCGGACCTCCAAAAGCCCTCCGCTTGGAGCAGAACAACCCGACGTCA CACACTATCTGTCCAGGCTTGAACGCCCGGACCTCCAAAAGCCCTCTGCT TGGAGCAGAACTACCCGATTTCACACACCGCTTGGGGTGCCCAGCCCGTC CATCCCGCCGACCGTGCCCTGTTCCACTCTCGACCCGCCTTCGCCTCTTA CCACCCCTCCACCCACTCTGCACAACGCAGTCCTGCGGGCAAGCCCTGGA TTCCGCCTGGCCGGTGATCCTGGACCTTCTGCACTCCGTCGCAAGGGGGG CAACCGCCACCGCCGTCCCCCCTTCCCCACGAACGCCTCCTTCTGCCGCC GCGGCGTTCGGCGGCGGAGGGGAGGCGAGGGGGCGGGGGCACGGCGGCGG CGGTGGTGTCGGCGGTGGTGAAAGGGTGCCCGCAGAAGGCGGAGGGGGGG GTGAAGGGGAGGAGGAGGAGGAGGAGGAAGGGGGGAGCGGGGCCGGCACG AGGCCGGTGGTCTGGGGAGGCGCGTGCCTATCCCTCGCCTTCAAGTGCCT GCAGCTGGTCGTGGACGACTTCCTTGAGAGGGTGCCCCGGGAACAGGTGC CGAGGCTCGTAACCTGCGCCGGAGCCTTCGGAGGCCAGACGGAGAGCGTC AACCTCAGCCTCACCGCCATCGGAATGCTGTGGACCGTGTGCGACACCTT CGCGGACGCGGTTGCCGCGTCCGCCCCGGCCAGCGCCGCGGGAGGAGTTG GAGGAGAAGCGGGGGAAGGATTGCGTCAGTCGTTGTCGTCGTCGCCGCCG TATTCCCCACCACCCGGGGAAAGCAAGAGGGTGGCGCGGTCGTCGCTGCA CTCCATGTGGCCCACCATGCTGTTTGAGCTGAGAAGTCTCGCCGTCGATT TCAGGCCCGAGCTGCGGAACTGCGCGGTGAACACGCTGTTTTCCGCCGCA GTGGGGAACGGCGACGGGCTGAGCGAGGCGGATTGGAAGCAGTTTTTGCT CGAGGTCACCTTCCCGCTCATCGAGCAGGTTAGTTGCTGCTGCTGCTGCT GCTGCTGCTGCTTCTGTTGATGTCGGTGTTGTTGTTGTTGTTGTGGCCTT GCTTGCTGCTCTTAGTATGTATGTCGTCCTCGTCGCGACTGTTGCTCCTT CTGTAGTTGGTGCAACGTGCGAGGTGCACGGTTACTGCCTGCTTGCCTGG CTGCCTAGTGTCCAACCGTCAGCACACTGCCAGCACGGCATTGCGTTGTT CGATTGTCCAGCTCTGGTACAGCCTATCGCCTTGGGACGTACCCACATTT TCACATGTTTCACTGTTTCTTGTTTTGCTACGCTGACCCTCCTCCTCCTC CTCCTCCTCCTCCTTTCGCTGTCTCGCTAACCGCGGCCGGCGCACCAGGT TCTCGAAAGCACCAACAGCGCCAGCAGCGGGGCCAACACGGCGGTTGCGC CAGAGCTCAAGAAGGGTGTCCGCATGCTGATGCACCACACCAGGGACACC GACCAGAAGCAGTGGAACGAGACTCGGGTGTTGGCCATGCAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10131:594..4735-

>mRNA_H-canaliculatus_F_contig10131.157.1 ID=mRNA_H-canaliculatus_F_contig10131.157.1|Name=mRNA_H-canaliculatus_F_contig10131.157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3462bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10131:594..4735- (Hapterophycus canaliculatus Oshoro5f female)
ATGTCCGAGGGTAGGGAGGCCATGACGAGAGACCACCGCAGCAGCAGCAG
CGGCAACATCAGCATCAACAGCGCAAAGGGGCCGAGGGGCACGGGGGACG
CCAAGGCTCACGTCCCCTGGGTGTCGTCCCGCTTGATGTCCGAGGGTAGG
GAGGCCATGACGAGAGACCACCGCAGCAGCAGCAGCGGCAACATCAGCAT
CAACAGCGCAAAGGGGCCGAGGGGCACGGGGGACGCCAAGGCTCACGTCC
CCTGGGTGTCGTCCCGCTTGGTGGTCGAGTGCGCCGTCACCAACACCTGG
CGCCTCCCGGTCGTGTGGGAGCTCGTTTCCGGACACCTCCGAGTCGTGGC
CAAGGCAAGGGAGCCTGCCAAGCGGGAGTACGCCGTGCGGGCGCTCCGTG
AGCTCATCGTGGACGGCGTGCAGAGGCTCCACCCCGTCCCCTCCGGCGCC
CCCTCCGCTGCAAACCCAGCCTCCGCCTCCGCCTCCGCCAAAGTCGGCTC
GACCGGCGACGCGAACAGCGCCGCCTCTCGAGAAGCCAACGGCGGCGGTG
GAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGGAGC
AGCAGTCGCGGCGGTGGCGGCGGCGGCGGCGGTGGCGGCGGCTCTACCGT
GCTCCCCCCGCCGCCGCCCGGCGGTGCGAACGGTGGTCGAGTGCGCCGTC
ACCAACACCTGGCGCCTCCCGGTCGTGTGGGAGCTCGTTTCCGGACACCT
CCGAGTCGTGGCCAAGGCAAGGGAGCCTGCCAAGCGGGAGTACGCCGTGC
GGGCGCTCCGTGAGCTCATCGTGGACGGCGTGCAGAGGCTCCACCCCGTC
CCCTCCGGCGCCCCCTCCGCTGCAAACCCAGCCTCCGCCTCCGCCTCCGC
CAAAGTCGGCTCGACCGGCGACGCGAACAGCGCCGCCTCTCGAGAAGCCA
ACGGCGGCGGTGGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCAGGAGCAGCAGTCGCGGCGGTGGCGGCGGCGGCGGCGGTGGCGG
CGGCTCTACCGTGCTCCCCCCGCCGCCGCCCGGCGGTGCGAACGGGGGCG
TTCAGGAGGAGGGCTTCCTACCGACTTTCTTGGGGCTGCGAGCGCGTCTG
GAGGGGGCGGTGGGGGGAGGGGAAGACGGGCCGTTTCGATGGGTGTTTGA
CTGCGGCGGCGTGGGTGGCGTTTTCTCGGCGGCCGGGGAGAAGGGCACGC
GGCGGAGGATGTCGACGAGGCTGGACGGCGGGGGCGATGCGTTCGAGGGG
GTGTTGTTCAAGACCATGGGGCTGTTCGCGCTGACGCCTCACGTCGACAC
GCGGGAGGCCACCCTGCAGACGCTCTTCAGCATATTACAGGGGGCGTTCA
GGAGGAGGGCTTCCTACCGACTTTCTTGGGGCTGCGAGCGCGTCTGGAGG
GGGCGGTGGGGGGAGGGGAAGACGGGCCGTTTCGATGGGTGTTTGACTGC
GGCGGCGTGGGTGGCGTTTTCTCGGCGGCCGGGGAGAAGGGCACGCGGCG
GAGGATGTCGACGAGGCTGGACGGCGGGGGCGATGCGTTCGAGGGGGTGT
TGTTCAAGACCATGGGGCTGTTCGCGCTGACGCCTCACGTCGACACGCGG
GAGGCCACCCTGCAGACGCTCTTCAGCATATTACAGTCCTGCGGGCAAGC
CCTGGATTCCGCCTGGCCGGTGATCCTGGACCTTCTGCACTCCGTCGCAA
GGGGGGCAACCGCCACCGCCGTCCCCCCTTCCCCACGAACGCCTCCTTCT
GCCGCCGCGGCGTTCGGCGGCGGAGGGGAGGCGAGGGGGCGGGGGCACGG
CGGCGGCGGTGGTTCCTGCGGGCAAGCCCTGGATTCCGCCTGGCCGGTGA
TCCTGGACCTTCTGCACTCCGTCGCAAGGGGGGCAACCGCCACCGCCGTC
CCCCCTTCCCCACGAACGCCTCCTTCTGCCGCCGCGGCGTTCGGCGGCGG
AGGGGAGGCGAGGGGGCGGGGGCACGGCGGCGGCGGTGGTGAGGAGGAGG
AGGAGGAAGGGGGGAGCGGGGCCGGCACGAGGCCGGTGGTCTGGGGAGGC
GCGTGCCTATCCCTCGCCTTCAAGTGCCTGCAGCTGGTCGTGGACGACTT
CCTTGAGAGGGTGCCCCGGGAACAGGTGCCGAGGCTCGTAACCTGCGCCG
GAGCCTTCGGAGGCCAGACGGAGAGCGTCAACCTCAGCCTCACCGCCATC
GGAATGCTGTGGACCGTGTGCGACACCTTCGCGGACGCGGTTGCCGCGTC
CGCCCCGGCCAGCGCCGCGGGAGGAGTTGGAGGAGAAGCGGGGGAAGGAT
TGCGTCAGTCGTTGTCGTCGTCGCCGCCGTATTCCCCACCACCCGGGGAA
AGCAAGAGGGTGGCGCGGTCGTCGCTGCACTCCATGTGGCCCACCATGCT
GTTTGAGCTGAGAAGTCTCGCCGTCGATTTCAGGCCCGAGCTGCGGAACT
GCGCGGTGAACACGCTGTTTTCCGCCGCAGTGGGGAACGGCGACGGGCTG
AGCGAGGCGGATTGGAAGCAGTTTTTGCTCGAGGTCACCTTCCCGCTCAT
CGAGCAGGAGGAGGAGGAGGAGGAAGGGGGGAGCGGGGCCGGCACGAGGC
CGGTGGTCTGGGGAGGCGCGTGCCTATCCCTCGCCTTCAAGTGCCTGCAG
CTGGTCGTGGACGACTTCCTTGAGAGGGTGCCCCGGGAACAGGTGCCGAG
GCTCGTAACCTGCGCCGGAGCCTTCGGAGGCCAGACGGAGAGCGTCAACC
TCAGCCTCACCGCCATCGGAATGCTGTGGACCGTGTGCGACACCTTCGCG
GACGCGGTTGCCGCGTCCGCCCCGGCCAGCGCCGCGGGAGGAGTTGGAGG
AGAAGCGGGGGAAGGATTGCGTCAGTCGTTGTCGTCGTCGCCGCCGTATT
CCCCACCACCCGGGGAAAGCAAGAGGGTGGCGCGGTCGTCGCTGCACTCC
ATGTGGCCCACCATGCTGTTTGAGCTGAGAAGTCTCGCCGTCGATTTCAG
GCCCGAGCTGCGGAACTGCGCGGTGAACACGCTGTTTTCCGCCGCAGTGG
GGAACGGCGACGGGCTGAGCGAGGCGGATTGGAAGCAGTTTTTGCTCGAG
GTCACCTTCCCGCTCATCGAGCAGGTTCTCGAAAGCACCAACAGCGCCAG
CAGCGGGGCCAACACGGCGGTTGCGCCAGAGCTCAAGAAGGGTGTCCGCA
TGCTGATGCACCACACCAGGGACACCGACCAGAAGCAGTGGAACGAGACT
CGGGTGTTGGCCATGCAGGTTCTCGAAAGCACCAACAGCGCCAGCAGCGG
GGCCAACACGGCGGTTGCGCCAGAGCTCAAGAAGGGTGTCCGCATGCTGA
TGCACCACACCAGGGACACCGACCAGAAGCAGTGGAACGAGACTCGGGTG
TTGGCCATGCAG
back to top