mRNA_H-canaliculatus_F_contig10120.149.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10120.149.1 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 5.690e-18 Identity = 39/52 (75.00%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 257 QMLMHRFPAVVPAGCLPLLLCFYVIFQLVFPVRKTWEFWRVIFRSLVAPLCK 412
++LM+RFP ++PAGCLPLLLCFYVIFQ+++PV K+ EFWRVI RSLVAPLCK
Sbjct: 32 KILMNRFPPILPAGCLPLLLCFYVIFQVIYPVHKSKEFWRVIIRSLVAPLCK 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10120.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10120.149.1 >prot_H-canaliculatus_F_contig10120.149.1 ID=prot_H-canaliculatus_F_contig10120.149.1|Name=mRNA_H-canaliculatus_F_contig10120.149.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=138bp LTLPHSSPCLVSPAIAWPGARPGTLCFAPDHHRRHHPGGLRARGGDLSLPback to top mRNA from alignment at H-canaliculatus_F_contig10120:2269..3498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10120.149.1 ID=mRNA_H-canaliculatus_F_contig10120.149.1|Name=mRNA_H-canaliculatus_F_contig10120.149.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1230bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10120:2269..3498- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10120:2269..3498- >mRNA_H-canaliculatus_F_contig10120.149.1 ID=mRNA_H-canaliculatus_F_contig10120.149.1|Name=mRNA_H-canaliculatus_F_contig10120.149.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=828bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10120:2269..3498- (Hapterophycus canaliculatus Oshoro5f female)back to top |