mRNA_H-canaliculatus_F_contig1011.143.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1011.143.1

>prot_H-canaliculatus_F_contig1011.143.1 ID=prot_H-canaliculatus_F_contig1011.143.1|Name=mRNA_H-canaliculatus_F_contig1011.143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=499bp
MPLQLLLVISPLLVWQTQAFLVAPLSCPSSDARAPHVASSRPRSAGRHPA
TVEDTTVGTVAVKAEEWEGFGEEDHARFLAEFWQKKPLLIRQAVKGFETL
LTKDELAGLACCPDVEARVVRGGRYVDNAGKDWEVEHGPFEEQMFSNLGE
THWTLLVNEVNRHVPEVSDLLGKFQFIPSWRVDDVMVSYAPKGGSVGPHV
DNFDVFLLQGAGKRRWSIEGAVTSGDEEEARSVQDIDLRVLADFQESQGW
VLEPGDALYLPPRFAHHGVSQDEECMTYSIGFRAPSTRDLVTFFSDHVAT
AKTKADAFYQDPDLRRQESCGLISREAVSRAKELIREAVLSALDDEEAFD
KWFGAQVTRSRRDHAGYPMQMDEEEGLSFGYQLPIDVTAAVKRAFLKEKA
AGDGARDADGLGPFVYHAEGLTFAFIEHEGPEGGATVFVDGNEFPLSKET
AFAASLVCDSPRLSPRDLGPALDGEQGEGVEALLHSLLREGYLYPADD*
back to top

mRNA from alignment at H-canaliculatus_F_contig1011:23367..29562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1011.143.1 ID=mRNA_H-canaliculatus_F_contig1011.143.1|Name=mRNA_H-canaliculatus_F_contig1011.143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6196bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1011:23367..29562- (Hapterophycus canaliculatus Oshoro5f female)
CTCTCCCACGTCAACCTACGTGCGGTTTAGGAGAGCTTCCACCATGCCAC TGCAGCTCCTCCTGGTGATCTCGCCCCTATTGGTGTGGCAGACGCAGGCC TTCTTGGTTGCCCCTCTGTCGTGCCCGTCCTCCGACGCTCGAGCACCGCA TGTCGCCTCCAGCAGACCGAGGTCCGCAGGACGACATCCTGCCACCGTCG AGGATACTACTGTTGGGACAGTGGCGGTGAAGGCGGAGGAGTGGGAAGGT TTTGGAGAGGAGGATCACGCCCGCTTCCTCGCCGAGTTCTGGCAGAAGAA GCCATTGCTCATACGCCAAGCTGTCAAGGGGTGAGCAGAAACACGAAACA CACAACATCTGATACGGAGATCTATCATGTGACGTCATGAGCGAGTTTCG CCGCGTCGTGCCTAGAGTCCAACGTCTGCTCTAGCAGACTGCCAGCAGAG CACACGTCAGTGACCTACCACAATGTCATAATCCCGTTTCGATATTTGGA GAGCCCGCCGTAAGAGTCGCGGTGTATAGTGCCAACGGCACACCGCTGTG CTGCTTTCGCAGATATAGCAGTCTAGCCTTCACATCGTAGATTCGTTTGC AAGCGCCGCAGCATTCCCGGTGCCGTGCAGTTATACTGCTGCAGTGTTTC ATAGTTAGAATTGATAATGCTACCGAAAGTAGGCCCGCAACATGTGTGGG ATACCGTATGTGTTGAGCGTGAAGAGCAGTTCGTACATCCTTCTTCGCCT ACTGTACCATTCGCTTCCATCCGCGTTCGCTGACAGGGTGTGGCATTCAC CGTGTGCCACCTCCAGCACAAACAGACATCTTGACCCGAATACCCGTCGA TTTGCGAAGGTCAAGGCAGGTTCTTTCATCAGAGGACACCAGTAGTACGG CATCAAGGCTCACCCCAAATCCTCATTTGTAGTATTTGCGCCATTCCCTC ATGGCCCCTCCCCCTCTTGGCTGACTCTGGTCTGGGTCCACCTTTCTCGG CTCTGCTGTGTGCTCTCGCTCTTGCGCTTTTTTTTTACTTGCAGCGTCTG ACCGTATCTACCTGCCGCTCTCGCTCTCCGCGTCGAACTCTGTGACAGGT TCGAAACTCTTTTGACGAAAGATGAGCTGGCTGGTTTGGCGTGCTGTCCC GACGTGGAGGCCCGCGTCGTGAGAGGGGGCAGATACGTAGATAACGCGGG CAAAGACTGGGAAGTGGAACACGGACCCTTCGAAGAGCAGGTGCGCATGA CAGCCAGTGTAGATGTGAACATCGAGACACGGATGCCCATCGAAATCCAC GAGTGCCCCCGCGGAAATGTCTTGAGGGTTCCAACACCTGTTTAGGCTCG TGGAGGAAGGCATGAGAACGCAGGCCGGGAGTTACGTTCCAGGCGCCAAG TCCTTCTAAAGCAACGTATTTGAAAGTATTTCCCGTCTGAAGTTGTTTCT CGCTTCGTAGTGCTCCAGGGACATCTCACTTCTCTCAATGTATCTCCTAC CTATGTGGTGCACGAGCTCCGTTTGCCCCTCCCATCGGAACATCGGCCTG CTTACCGCTGAGTTGCTGCAATTTTGTCATATAATCTTCTCGTCGCCTCC TCGCCATCTCAACCCATATTCTCTGATTTATTTCCACCTGGTTTTGTGTT TTCGACGGATTCAGATGTTCTCAAATCTTGGAGAGACGCACTGGACACTG CTGGTCAACGAGGTTAACCGTCACGTACCTGAGGTGCAGCGAACTAGCAA GCAGCGTAGATAGTACGGTCCGTTAGTGTAGCACCGGAATGGATAATCAT TGCGGAGAGGGTATAAGGCGCTTTTGGGCATTTGGCTTGACTGCTACAGA GGCACCTGCCTCGCTTACTGACGAGCTGGGAATCCGATCTATTCTGTTTG CACCGGGCGCGTTCGATGCAAGAAGGGCATCGACGCGCACATAGGAAGCC AGGGCAGGGCAGATAAGCTTACGCTGCTGCCGTGAGCATTTGTCACTCTG CCGGCTAATGTCAGTGGTTCCGGGCGCTTTCGATTTCGTCCTTCCAGGTG TCCGACTTGCTGGGCAAGTTCCAGTTCATACCGTCGTGGCGTGTGGATGA CGTCATGGTGAGCTACGCCCCCAAGGGGGGCTCGGTGGGGCCGCACGTGG ACAACTTCGACGTATTCCTGCTGCAGGTAACAGCCCACGCCAACAGCCCG CGAGTGAAGTCGCGTCGCTTCTGTCCGATTCCGGCTTCTTGCGGCTGCCG CCCGGTTGGGTTTGGGCCAAAGTGACCTCGCCTTGTTCGATTTCATCAGA CCATCGTTGCGCCACGAGCGTGTCTCAGACTCGGCGAAACAGTGTGTTCG GTCCCTTTCTTTGCGACGCTCGCACGAGAAAGAGAGAAGCGCAGATTTTT TCCTCCGAGGTTTCTGCCGTCAAATGCATGGCCCCTGCCGATGCGTTGTT CTGTACACGTTTGTTTTCGATGACCGCCGTCCGTGCTTAAGGGCGCCGGT AAGCGGCGATGGTCGATCGAGGGTGCGGTTACGTCTGGGGACGAAGAAGA GGCTCGGTCGGTGCAAGACATCGACCTCAGAGTTCTCGCGGACTTTCAAG AGTCTCAGGTGCGATCATGCCACCATGCTGTACCGAAGTCGAATGCGTTA AGTGATCGTGCTGCCCGGTCCGCGGCCCTCGCGCCTGAAAGGCTTCAAGC CGGGCTATGCAAACGACGTTGTCGTCCCCCTCTCCGCCCACCCACCTGAA CTCAACAGACCAGAAAACAGAACGTTACAATTATAGCAAAACCGAACCGA ACCGAACCGGACCGAACCGGAGTAAATCAGTAACAACATCGCACCGCACG TGGACAGGGGTGGGTGCTCGAGCCCGGGGATGCGCTCTACCTTCCGCCGA GGTTTGCTCACCACGGCGTCAGCCAAGACGAGGTGCGCTGCCTGCTACTC CGGAGTTTTTTCGATGAGTCGCGTCTCTTGTTTGGGAGACTGCAGTGTAA AGCCGCACGGGGGCGGCTCGAGTTAGGATCGACATTTGCGCCACTGGCTG CGTTCGCAGGCTCCCCTTCATGTTGAGATTGGCAAACGATTCCGACGACA GTCGTTTCCCAGGCTGCCTCTCACCCTTTCGAAGTATTGGCTGTGCTTGG ACCAAAGTTCGCTCCGTGAGGGTGGCAGGCGTGCTGGCGTTTGACGCTAA TGTGAGACGCCTGCAAGGATGTGCAGATGGGGCCCAGGGGGTGGCGTTCG CGTTGCTTTCAGCTAGCGAAGGCGAGCGATTGTAGATAGCCCCCCGCAGG CTCGTCACCAGACCCTGAGCAGTATCCATTTTTTTACCGCTTGCCACACT ATGCGCCAAGGGGTGAACTACTTGTAAGGACCACCTAAATGCCGCGATTA CATGAAGTCAGAAATCTGAACCCCTCCTCTCCGTTGCTCGAACGTGTTTA CTTGCAGGAATGTATGACGTACTCGATAGGGTTCCGAGCGCCGTCGACTC GTGACCTGGTGACGTTCTTCAGCGACCACGTCGCCACAGCGAAGACGAAA GCCGATGCCTTCTACCAAGACCCTGACCTCAGGAGACAGGAGAGCTGCGG TGAGTGAAGGGGGCGAGGAGGGCCGGGGGGAGAGGGCTGTAGCCCGCGGG CCGCTGGTTTCATGCTGCTGTGGCACGCCGTATGGTAAATTTGTTAGGCG TCGAGCGCCTACCGCATTCTGCGGGGGTAAATTAGGTTGCAAGAGTCTGT CAGTGCTGGTGGGCGCATCTCCTCGTCTCGTTGGCCGATCTGAAAGTAAT TTACGGGACGTCGTTATTGGTGAGGGGTGCCGGGGCTGGTGCCGCCCCGG CAGTCCCTCCCGCTGCGCGATCGGACGAAGAATGTGCACGGAAAATGCAC GCGGTATAGCAGCGCGTAAAACAGATCATCCCTTCTTGTTTTGGCAAAGG AAGGAGAAACGTGGAATCATTGCACGATTTATCGTTCGAGTGCAGACAGA CGGAGAAGAAGGCAACGAAAAAAAAATACGAAAAAGTGGTAGGTTTCGCG CCAAAGTTGCCGTTGAGACGTCGGAAATGCTAATGCTGGCCGAGGACACC TGCCGTCCGAGAAGTGGACTGTGTATTTTTGCAAGCGTGAAGGTGCATGT CATGTGTGCTACTACTGCTTTGGCTCCGATAAATTCGTAAGTTGCGTGTG TGTACAGTGCATCAGGACTGGGTGCAGCTTTACCTTGCCATATACTCACG CCGCTTCCCTCCGCCAAAACGATGCATGTGTCGTTTCAGGTTTGATATCC AGGGAGGCGGTGTCGCGGGCAAAGGAATTGATTCGGGAAGCTGTACTGTC GGCGCTGGATGACGAAGAAGCGTTCGACAAGTGGTTCGGCGCTCAGGTTA CAAGGTGAGCTCGCCGAGGGGCATGCGGCTGTTGTTATCCGCATTTTGAA GATCAAGGCAAGCGCCGTTCGCAATTTCCCCGGGTCAACAAGTGAACAAA ACGGCAAACTTTTCGCTGCAGAAGTGCATACGACGCTAGCGATGGCTAAG CTGATAAAGAGGAATTACAGCAATGAAGATGGACTCAACGACAAGCAATG CACCCGTTACCCAGATCTCGAAGAGATCACGCGGGCTATCCGATGCAGAT GGACGAGGAAGAGGGGCTCTCCTTCGGGTACCAACTGCCGATAGACGTAA CCGCCGCCGTGAAAAGGGCGTTCCTAAAGGAGAAGGCGGCTGGGGATGGG GCGAGGGACGCGGACGGTCTAGGCCCCTTCGTATACCATGCTGAGGGGCT GACGTTTGCCTTCATAGAGCACGAGGGGCCCGAAGGAGGTGAGCGTGCTT ATCGAAGCGTTCTGCTTGTCGAGGGATTCGCCTCGGCAGGGAAGGAAGGC TCGATGGAGCAGTCGCGAACAGGCGATGCGAGATGGACACAATGACCTAC CTCATCGCGAAACGGAAAGCGCGATCTCGCGTGAGCATGCCGGTGTTCTC GATTTGCACCCTTGTTCGTGTCGCTGTTAGCAAGATACCGTGCAGGGAAG GACCACGATTATCGACGCGGGCGCCGGCTTCGATAGACAGCTCGCGGAGA ACGGTCAATCGATTATTTTGTTTACTTTTCGCAAGCAATGAATACATCAC GCAGATGACCTGCTCCGATATGAACAGGCAAGTTGGTAGTTGAGCTGTGA ACGACAACGCTCGGATCCGGGAACACCTCTCTTTTGTTCGTTTCGCCGAA CCGAAGAATCCTACTCTTGCGCTTTTTTTCCCCGCTGTTGTTTAAGGTGC CACGGTGTTCGTCGACGGAAACGAGTTTCCCCTGTCAAAGGAAACTGCCT TTGCGGCGTCGTTGGTCTGCGACTCTCCGCGCTTGTCGCCGCGGGACTTG GGGCCCGCGCTGGACGGGGAGCAGGGCGAGGGGGTGGAGGCTTTGTTGCA TTCGCTCTTGAGGGAAGGGTACCTCTACCCTGCGGATGATTGATCCACTT TGCGGTTCGTTCTTTGTCGCACGCCACATATGTTGATTACAAAGTCGTTG TTGATTCCCTGTATTCGGTTGTGAACTTGTCTCTGTCGCAACGTCTGGAT GAGGTCGCGTCTTGCTGTCGGATATTTCTCTCAACGATAGCGGGTCCTCT TCTTCATCACTTCACGGCAACGGGCTGGCATGCTTGCGGTCAGTATTGCG TGGCGTACCGATCTTTCTAAAAAAATGTAACCTTCACAGCGGAATTTCTT CGCGGTGACCCGTCAGGATTCGAGAACGGGCCGCCTTAATTTTCGGCGAG CAATGTTGCTCTCATGGTTGTTCGGACGGTTGTGCGAACGTTTCTGTCGT CTGCAACCTGCCTCGAAGTGGTTGCAGAGCTGCGTTGGAGGTATACGAAA TGTGGAAGCGAGAGTAAGGGAAAGTCTCGAGCATTGTTACCGGCTGGAGA ATGCGGCGCTCTTCGCCCCGCGATCACGGAAGGATGACCCTTTGTCGTTT TCCTTCACAACCCGTGACGAACCGGGAGTATGCGTGGCCTCTTCTCTACC TTGCCTGCTCAACACCCACCCCTCTCTCGCGGTCGTGAGACGAAGGTTCG GAAAGCCGAAGAGTCGAGGAGAAGAGGAGTGGAAAGAACCAAACGAAAAC GACGATCTTGCCCAACCCTGTACTTGGGGGCGATCGGCGATGTGTG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1011:23367..29562-

>mRNA_H-canaliculatus_F_contig1011.143.1 ID=mRNA_H-canaliculatus_F_contig1011.143.1|Name=mRNA_H-canaliculatus_F_contig1011.143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2994bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1011:23367..29562- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCACTGCAGCTCCTCCTGGTGATCTCGCCCCTATTGGTGTGGCAGAC
GCAGGCCTTCTTGGTTGCCCCTCTGTCGTGCCCGTCCTCCGACGCTCGAG
CACCGCATGTCGCCTCCAGCAGACCGAGGTCCGCAGGACGACATCCTGCC
ACCGTCGAGGATACTACTGTTGGGACAGTGGCGGTGAAGGCGGAGGAGTG
GGAAGGTTTTGGAGAGGAGGATCACGCCCGCTTCCTCGCCGAGTTCTGGC
AGAAGAAGCCATTGCTCATACGCCAAGCTGTCAAGGGATGCCACTGCAGC
TCCTCCTGGTGATCTCGCCCCTATTGGTGTGGCAGACGCAGGCCTTCTTG
GTTGCCCCTCTGTCGTGCCCGTCCTCCGACGCTCGAGCACCGCATGTCGC
CTCCAGCAGACCGAGGTCCGCAGGACGACATCCTGCCACCGTCGAGGATA
CTACTGTTGGGACAGTGGCGGTGAAGGCGGAGGAGTGGGAAGGTTTTGGA
GAGGAGGATCACGCCCGCTTCCTCGCCGAGTTCTGGCAGAAGAAGCCATT
GCTCATACGCCAAGCTGTCAAGGGGTTCGAAACTCTTTTGACGAAAGATG
AGCTGGCTGGTTTGGCGTGCTGTCCCGACGTGGAGGCCCGCGTCGTGAGA
GGGGGCAGATACGTAGATAACGCGGGCAAAGACTGGGAAGTGGAACACGG
ACCCTTCGAAGAGCAGGTTCGAAACTCTTTTGACGAAAGATGAGCTGGCT
GGTTTGGCGTGCTGTCCCGACGTGGAGGCCCGCGTCGTGAGAGGGGGCAG
ATACGTAGATAACGCGGGCAAAGACTGGGAAGTGGAACACGGACCCTTCG
AAGAGCAGATGTTCTCAAATCTTGGAGAGACGCACTGGACACTGCTGGTC
AACGAGGTTAACCGTCACGTACCTGAGATGTTCTCAAATCTTGGAGAGAC
GCACTGGACACTGCTGGTCAACGAGGTTAACCGTCACGTACCTGAGGTGT
CCGACTTGCTGGGCAAGTTCCAGTTCATACCGTCGTGGCGTGTGGATGAC
GTCATGGTGAGCTACGCCCCCAAGGGGGGCTCGGTGGGGCCGCACGTGGA
CAACTTCGACGTATTCCTGCTGCAGGTGTCCGACTTGCTGGGCAAGTTCC
AGTTCATACCGTCGTGGCGTGTGGATGACGTCATGGTGAGCTACGCCCCC
AAGGGGGGCTCGGTGGGGCCGCACGTGGACAACTTCGACGTATTCCTGCT
GCAGGGCGCCGGTAAGCGGCGATGGTCGATCGAGGGTGCGGTTACGTCTG
GGGACGAAGAAGAGGCTCGGTCGGTGCAAGACATCGACCTCAGAGTTCTC
GCGGACTTTCAAGAGTCTCAGGGCGCCGGTAAGCGGCGATGGTCGATCGA
GGGTGCGGTTACGTCTGGGGACGAAGAAGAGGCTCGGTCGGTGCAAGACA
TCGACCTCAGAGTTCTCGCGGACTTTCAAGAGTCTCAGGGGTGGGTGCTC
GAGCCCGGGGATGCGCTCTACCTTCCGCCGAGGTTTGCTCACCACGGCGT
CAGCCAAGACGAGGGGTGGGTGCTCGAGCCCGGGGATGCGCTCTACCTTC
CGCCGAGGTTTGCTCACCACGGCGTCAGCCAAGACGAGGAATGTATGACG
TACTCGATAGGGTTCCGAGCGCCGTCGACTCGTGACCTGGTGACGTTCTT
CAGCGACCACGTCGCCACAGCGAAGACGAAAGCCGATGCCTTCTACCAAG
ACCCTGACCTCAGGAGACAGGAGAGCTGCGGAATGTATGACGTACTCGAT
AGGGTTCCGAGCGCCGTCGACTCGTGACCTGGTGACGTTCTTCAGCGACC
ACGTCGCCACAGCGAAGACGAAAGCCGATGCCTTCTACCAAGACCCTGAC
CTCAGGAGACAGGAGAGCTGCGGTTTGATATCCAGGGAGGCGGTGTCGCG
GGCAAAGGAATTGATTCGGGAAGCTGTACTGTCGGCGCTGGATGACGAAG
AAGCGTTCGACAAGTGGTTCGGCGCTCAGGTTACAAGGTTTGATATCCAG
GGAGGCGGTGTCGCGGGCAAAGGAATTGATTCGGGAAGCTGTACTGTCGG
CGCTGGATGACGAAGAAGCGTTCGACAAGTGGTTCGGCGCTCAGGTTACA
AGATCTCGAAGAGATCACGCGGGCTATCCGATGCAGATGGACGAGGAAGA
GGGGCTCTCCTTCGGGTACCAACTGCCGATAGACGTAACCGCCGCCGTGA
AAAGGGCGTTCCTAAAGGAGAAGGCGGCTGGGGATGGGGCGAGGGACGCG
GACGGTCTAGGCCCCTTCGTATACCATGCTGAGGGGCTGACGTTTGCCTT
CATAGAGCACGAGGGGCCCGAAGGAGATCTCGAAGAGATCACGCGGGCTA
TCCGATGCAGATGGACGAGGAAGAGGGGCTCTCCTTCGGGTACCAACTGC
CGATAGACGTAACCGCCGCCGTGAAAAGGGCGTTCCTAAAGGAGAAGGCG
GCTGGGGATGGGGCGAGGGACGCGGACGGTCTAGGCCCCTTCGTATACCA
TGCTGAGGGGCTGACGTTTGCCTTCATAGAGCACGAGGGGCCCGAAGGAG
GTGCCACGGTGTTCGTCGACGGAAACGAGTTTCCCCTGTCAAAGGAAACT
GCCTTTGCGGCGTCGTTGGTCTGCGACTCTCCGCGCTTGTCGCCGCGGGA
CTTGGGGCCCGCGCTGGACGGGGAGCAGGGCGAGGGGGTGGAGGCTTTGT
TGCATTCGCTCTTGAGGGAAGGGTACCTCTACCCTGCGGATGATTGAGTG
CCACGGTGTTCGTCGACGGAAACGAGTTTCCCCTGTCAAAGGAAACTGCC
TTTGCGGCGTCGTTGGTCTGCGACTCTCCGCGCTTGTCGCCGCGGGACTT
GGGGCCCGCGCTGGACGGGGAGCAGGGCGAGGGGGTGGAGGCTTTGTTGC
ATTCGCTCTTGAGGGAAGGGTACCTCTACCCTGCGGATGATTGA
back to top