Homology
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)
HSP 1 Score: 77.0 bits (188), Expect = 1.280e-13
Identity = 82/216 (37.96%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 7 NNNGGCDFDGGDCCFCDCTDGVDYDCNQNGFDCIDPSSSCSEAHWTEERHGATSS----------GRASVDSTREQYSFSKIERKRYSSSTVGYAAVAIRPGLLSTSGSSS--VGAIVXXXXXXLLFVAAAIILAFLFKTGRLKPCQCCSRTVPVVVATPTPG--GVTAT----PAKAYPVVPQDHGDAPRPPAYGASEGG------SAPPPYNPV 582
NNN GC++DGGDCC CDC D Y+C +GF C+DPSSSC+ H+ ++ S G S ST G A G+ S G V XXXXXX F+AAA +L LF T RLK +CCS P P G V AT P A P D P PPAYG+S+ G SAPP +PV
Sbjct: 44 NNNSGCEYDGGDCCSCDCFDDT-YECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTYDYDVDDFGDDSXXXXXXXXXXXXXXXXXXXXSTSG-ALDLEGGGIPSDDGDDGAPVXXXXXXXXXXTAFLAAAAVLVCLFVTCRLKCSKCCSSPGPPAAPAPPAGHGSVQATTKTFPGPAAPAAAAPASDLPPPPAYGSSDHGATSTATSAPPDTHPV 257
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)
HSP 1 Score: 56.6 bits (135), Expect = 9.020e-7
Identity = 26/40 (65.00%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 7 NNNGGCDFDGGDCCFCDCTDGVDYDCNQNGFDCIDPSSSC 126
NN GCD+DGGDCC CDC D Y C GF CIDP+SSC
Sbjct: 44 NNISGCDYDGGDCCSCDCLDDT-YQCGVVGFTCIDPTSSC 82
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)
HSP 1 Score: 57.8 bits (138), Expect = 1.990e-6
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 10 NNGGCDFDGGDCCFCDCTDGVDYDCNQNGFDCIDPSSSCSEAHWT 144
N+ C++DGGDCC CDC D YDC G+DC+DP+SSCS++ T
Sbjct: 425 NHADCEWDGGDCCECDCVDAT-YDCGVVGYDCLDPTSSCSDSPGT 468
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)
HSP 1 Score: 57.4 bits (137), Expect = 2.520e-6
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 7 NNNGGCDFDGGDCCFCDCTDGVDYDCNQ-NGFDCIDPSSSCSEAHWTEE 150
NNN CD+DGGDCC CDC D Y+C F CIDPSSSC+ H+ ++
Sbjct: 143 NNNSNCDYDGGDCCSCDCFDDT-YECGSVTAFTCIDPSSSCTYHHYXDD 190
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)
HSP 1 Score: 54.3 bits (129), Expect = 3.330e-5
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 1 AGNNNGGCDFDGGDCCFCDCTD-GVDYDCNQNGFDCIDPSSSCSEAHWTEERHGATSSGRASVD 189
+GNNN CD+DGGDCC CDC D G Y+C G+ C+D +S C +G+TS G D
Sbjct: 371 SGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSIC---------YGSTSGGNFDSD 425
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Match:
D7FSN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN8_ECTSI)
HSP 1 Score: 52.4 bits (124), Expect = 8.260e-5
Identity = 64/195 (32.82%), Postives = 74/195 (37.95%), Query Frame = 1
Query: 22 CDFDGGDCCFCDCTDGVDYDCNQNGFDCIDPSSSCSEAHWTEERHGATSSGRASVDSTREQYSFSKIERKRYSSSTVGYAAVAIRPGLLSTSGSSSVGAIVXXXXXXLLFVAAAIILAFLFKTGRLKPCQC---CSRTVPVVVATPTP--------GGVTATPAKAYPVVPQDHGDAPRPPAYGASEG-GSAPPP 570
CD+DGGDCC CDC D + Y C +DC++PS+ C G V VGAIV +LF+AA IILA LFK G LKPC C C+ P AT GG + K YP V A PPA A EG GS P P
Sbjct: 80 CDWDGGDCCECDCVDAL-YTCGVADYDCLNPSA-C----------GGDEDDXXDVP----------------------------------------VGAIVGGVIGGVLFLAAVIILAVLFKKGCLKPCACGDSCACCEPGPPATXXXXXXXXXAGGGSAPSVVKGYPEVYSSAAVAQLPPA--AYEGPGSVPAP 220
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10105.138.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 6
0 1 Expect = 1.28e-13 / Id = 37.96 Expect = 9.02e-7 / Id = 65.00 Expect = 1.99e-6 / Id = 55.56 Expect = 2.52e-6 / Id = 55.10 Expect = 3.33e-5 / Id = 45.31 Expect = 8.26e-5 / Id = 32.82 Sequence D7FSP3_ECTSI A0A6H5K5D1_9PHAE A0A6H5JVP4_9PHAE A0A6H5KN00_9PHAE A0A6H5J6K0_9PHAE D7FSN8_ECTSI back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10105.138.1
>prot_H-canaliculatus_F_contig10105.138.1 ID=prot_H-canaliculatus_F_contig10105.138.1|Name=mRNA_H-canaliculatus_F_contig10105.138.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=194bp
AGNNNGGCDFDGGDCCFCDCTDGVDYDCNQNGFDCIDPSSSCSEAHWTEE back to top mRNA from alignment at H-canaliculatus_F_contig10105:882..4063+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10105.138.1 ID=mRNA_H-canaliculatus_F_contig10105.138.1|Name=mRNA_H-canaliculatus_F_contig10105.138.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3182bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10105:882..4063+ (Hapterophycus canaliculatus Oshoro5f female)GCAGGGAACAACAACGGAGGCTGCGATTTCGATGGCGGCGACT GTGAGTG
GAGATCGAAGAACACGTTTGTTCGACTTGCAGTTTAGATTGGGAGCATGG
AAGGATGATTGACAACATACGCCACCGTTGAGATGGAGTGCCTGAAATTT
TACTGCAGGTCTTGGCAGCCAATTTCCTCCCGTGCTTGGTGTGCTGCCGG
ATTCGACGCAGGTTGTTTTTGCGACTGCACCGATGGGGTCGATTATGATT
GCAATCAAAACGGATTCGACTGCATTGATCCAAGCTCTTCTTGCAGCGAA
G GTGAGAAATGATCGGGTAAGGCGTGCCGTGTTCTTTTTGTCGGATGCCC
GACAGCACGTCATGTGCCCAACGATAATGACCAGGCAGGCTGAATGTTGA
CCTGGGAGGTTGACCTTTCACTTGTAGTGACTCAAAACCCGATCGACAGA
GGCAGGCCTCAAGGCAAACAAAGTGCAGAATTCACCCGTGACCGGCCAAG
GTTCACCGATGGTATGTGGTAGAGGGAGCAAACCTTTCCTTTGCGCAACC
TCTCAACACGCTCACGAGAGTTATTTTGCGGCTGCGACCTGTAAGTAGGT
GAAGTCCATTCCGCGATCTTGCTCGGCACATGCATCTCTACAGATGCCTG
TCGCGCTTGTTGAAGGACATCTCCGTGCTTCCTAAGCGTTTCTGGGTAGG
TCGAAACCACAATCTGGGTTGTGCAGCATCCCTCCTCCACGATTTATCTG
CTCACTAGCCCACTGGACAGAGGAAAGGCATGGCGCAACAAGTTCCGGCC
GCGCATCTGTTGACTCCACTCGAGAAC GTTTCGCACGATAGATCAGCTCT
CTTTTAAACGGCGGAAAAAACGAGTTGCGCTGTGTCTTACGTGAACAGTA
TAGGAGGGAAGGGTTTCGGCGGCATCCGCGGCCACAATCACCTTTGAATC
CCAGGACGACAGGAAATGTTGATTTACAGAGAGCACACAGTCGAGTGTCG
TGTCTCAGGCTTACTCTTGCGGAGGAATTCGTATCTCGCAGAGAGACTCG
TGACGAACGACCGGAAGAGCACAAACAAGACTGCTCTCCTCATTCGGAAC
GCACCGTCTTAGAACGGATCATGTGAGGGGAACGTTCTTTGGTGAAAAGA
CGACGTATATGACCCGCGATTGCCTTGGTCCCACAATGTAGACTGGGCTG
TCATGGAGGGGCTTAGCACCCACTTTGCAGAGATGGAAACTGGCTGGAAC
ACGAGTGTAGTCGGTGAACTGGCCCTTGGGTCTTCTGAAAAACGTTGTTA
CCATTGTGGCTTCATTTTGTTGGCGTTCCCGCCGCATCAACGCTCTCAAC
TAGGGAACACTCGAGTTGAGGTGGTTAAATCTGCGATAAGAGTTGACGTG
GGTGTTTTTCATGAAAACACATCTTAGGGATCCGGAATGTGGAATGTTGC
ATGACGCACCCTTGTGAGCCTTACAGATATACTCCAGAGTATTCGTTTTC
CAAAATCGAACGGAAAAGGTACTCATCTAGTACCGTAGGATATGCGGCAG
TGGCGATCCGTCCCGGCCTCTTGAGTACGT GTTTTATTTATATCACTTTC
TCTAGTAATGACTGACACATACCGGGCCTTCGTTCAGGACCCTTGGGCTT
GCCAGAATGGACTCTCGGCCACCTCAGTTCCTTTCGTGCATGGGTCGTTC
CCCACGTTGATATATGGCTAGTTTTAGGTTTCAAAGCTTCGCGCTGCACT
AAATACGCATGATTTCCCTCGTACACCTGAAGCTGTACATAACTCAAACG
TCAATGTGTCCACCGTAGACTGGAGCAAGCCGTGACGATGAACAACTGTC
TTGCAAAATGTAGTCCGCATTTATTTGCCTGAATCCCACCGTGTTCTCGT
GCTCCGGCTGCTGCTCACAAATTGAGGTCCACAATCGATTGCTGTTGCGG
CACGACGATCAAACTTCGTCACTCTTGAGGTGCCTTTAGTGCAACTGCAG
TTGTTGACTACCCAACAAGAATGGGGCGATTCTTTCTAGCCTGACTGAGT
TCCCTCGAGCCGTCTACTAGACAGCAGGGCCCCTGGATATATCGAGTAAT
GGTACTCACTTGTGACGGACATTTATTTCTTCGCCGACTGACGATTCCCG
CCAACCGCGCCTTCCATCTTGGTGCGAATGTAATGTTGGTCGTCGGCCGA
CGGGGATCCTGGGACATCACGGTATGATCAGTGGAAGATAGCGGAGAAGG
TGAGGCTCACCAACCTTCATGACTTTCTTCTTTCGAGCGATGAAGATGAA
CCGCCACATGCTGAACAGCCAATGCATACGCACATCTTTCCCGTCCCGAC
TATAAGGGCCGCTGAATGTAGTGTGAAAGGGATTGTCGATCGATTCGCAT
TCGTCCGCGTTCATACTTCGACAGATCCGATCCGCATGTGCACCTTTAGC
CAACGGGAACCTTTGCGTATATGATTTTGTAGTTCTTCTGGCTTAATTTG
TTGCTTCTACTCGTGTCTTTAGTTGCCTAAGCAGGTTTGTTTACGACTTG
AAAATTTTCGCCCCTTGCATTTACTCCGACCGGTTGGGTATTTTCGCTGC
CGCGATCGCCGTTACTCCCGTTTACATGTCTGTTACTTGTAGAGTCGTGA
CTGGTTCGTTTTTGATAACGTTCAGGTCACCTCGATCAAAACTGATTCCC
AAGATCTACTGGTGATGCAGGGCCCAACTTCGCGATGGCGCATGCATGCT
TGGGTTACGCATGAGCTCCTTGTGAAGGGGTAGGAGATAAAACACGTGTC
GATCATCTTCCCAAAGCCCAAGTTCCTCTTGTTGCCGTTTTGCTCAAACC
GTTGCCCACACTGTTTTTTCCGATACCCCGCCACAATAAATCGAGCAGGT
TCGTCGTCAGTGGGTGCCATCGTTGGCGGCGTGATCGGGGGCTTACTTTT
CGTGGCCGCTGCGATTATCTTGGCTTTTCTGTTCAAGACCGGTCGCCTGA
AGCCGTGCCAGTGTTGCAGCCGTACGGTTCCTGTGGTAGTCGCTACTCCT
ACTCCTGGCGGCGTTACGGCGACACCAGCTAAGGCTTACCCCGTGGTTCC
TCAGGATCATGGCGATGCTCCTCGTCCTCCTGCTTATGGAGCCTCTGAGG
GAGGTTCGGCGCCGCCCCCCTATAACCCCGTA back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10105:882..4063+
>mRNA_H-canaliculatus_F_contig10105.138.1 ID=mRNA_H-canaliculatus_F_contig10105.138.1|Name=mRNA_H-canaliculatus_F_contig10105.138.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1164bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10105:882..4063+ (Hapterophycus canaliculatus Oshoro5f female) back to top