mRNA_H-canaliculatus_F_contig10066.97.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.080e-15
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 3

Query:  171 SVRARTSLEAHLELIGELPVHVAASVRYKLMPARPGHIVGFGPDGF 308
            SV ARTSLEA L+LIGELPVHVAA+VRYKL PARPGH+V FGP+GF
Sbjct:  311 SVWARTSLEALLDLIGELPVHVAAAVRYKLTPARPGHVVVFGPNGF 356

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BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5KWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 3.270e-11
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3

Query:  180 ARTSLEAHLELIGELPVHVAASVRYKLMPARPGHIVGFGPDGF 308
            ARTSLEA L+L+  +PVH+AA+VRYKL P+RPGHIV FGP GF
Sbjct:  327 ARTSLEALLDLVSRVPVHLAAAVRYKLTPSRPGHIVVFGPGGF 369

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BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.300e-11
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 3

Query:  168 HSVRARTSLEAHLELIGELPVHVAASVRYKLMPARPGHIVGFGPDGF 308
            ++V ARTSLEA L+L+  +PVH+AA+VRYKL P+RPGH+V  GP GF
Sbjct:  267 NTVWARTSLEAPLDLVSRVPVHLAAAVRYKLTPSRPGHVVVVGPGGF 313

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BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5JYU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU5_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.440e-9
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1

Query:   46 ILRRKLETAHFNLNLFDEAPPDTNLEKDCMGGPEAESTDDSTAYGRA 186
            +LR++LE AHF+ N+ +EAPPDT+LE DC  GPEAEST D+T + RA
Sbjct:  157 VLRQQLEAAHFDFNVCEEAPPDTDLEIDCKLGPEAESTGDNTVWARA 203

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BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.530e-8
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1

Query:   46 ILRRKLETAHFNLNLFDEAPPDTNLEKDCMGGPEAESTDDSTAYGR 183
            +LR++LE AHF+ NL +E PPDT+LE DC   PEAEST+D+T + R
Sbjct:  716 VLRQQLEAAHFDFNLCEEGPPDTDLEIDCKLDPEAESTEDNTVWAR 761

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BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Match: A0A6H5KC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC44_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.410e-5
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 3

Query:  222 LPVHVAASVRYKLMPARPGHIVGFGPDGF 308
            +PVH+AA+VRYKL P+RPGH+V FGP GF
Sbjct:   71 VPVHLAAAVRYKLTPSRPGHVVVFGPGGF 99

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10066.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5JY17_9PHAE	4.080e-15	82.61	SWIM-type domain-containing protein n=3 Tax=Ectoca...	[more]
A0A6H5KWR3_9PHAE	3.270e-11	72.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L2H3_9PHAE	6.300e-11	63.83	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JYU5_9PHAE	1.440e-9	61.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZB4_9PHAE	2.530e-8	58.70	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KC44_9PHAE	1.410e-5	72.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928634.3591201-CDS-H-canaliculatus_F_contig10066:2296..2605	1622928634.3591201-CDS-H-canaliculatus_F_contig10066:2296..2605	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10066 2297..2605 +
1696845505.3769557-CDS-H-canaliculatus_F_contig10066:2296..2605	1696845505.3769557-CDS-H-canaliculatus_F_contig10066:2296..2605	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10066 2297..2605 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig10066.97.1	prot_H-canaliculatus_F_contig10066.97.1	Hapterophycus canaliculatus Oshoro5f female	polypeptide	H-canaliculatus_F_contig10066 2297..2605 +