mRNA_H-canaliculatus_F_contig10049.82.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10049.82.1

>prot_H-canaliculatus_F_contig10049.82.1 ID=prot_H-canaliculatus_F_contig10049.82.1|Name=mRNA_H-canaliculatus_F_contig10049.82.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=177bp
MDENRAYGFFEGIGGAIYTRGNIVIEGDSQFSLNIASNGGGIYQTAIGSL
VFNGMATFSENSAYDLRGGGLYNGGGVVDFNGGSLFDGNGASGSGDGGQG
GAIYNGDEGVVTLTGSTTFSSNSAYWGGAIYNDDGDVEDGEAASTTTFPA
DTVFVDNRAEYCPNVHDGDNDNCPEV*
back to top

mRNA from alignment at H-canaliculatus_F_contig10049:381..4396-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10049.82.1 ID=mRNA_H-canaliculatus_F_contig10049.82.1|Name=mRNA_H-canaliculatus_F_contig10049.82.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4016bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10049:381..4396- (Hapterophycus canaliculatus Oshoro5f female)
GGTGTGCTTATTTTCGAAGGAGACTCCGCTTTCAGAAGGAACGAAGTACA
CACCGATGACTCCGTCGAGCAAGGAAAGGGCGGCGCCATCTCCAACACCG
GGTCGGGCAGCATTTTCTTCAAGAGCAAACTCACCATGGACGAGAACCGC
GCATATGTAAGCTCGCCACGTATTGGAGAGCTACCTACGATGTGCAGCCC
TGTCTGCACGTGTTGACAAGATATTCAGTGACAATTTTGTGCCATGGAAA
CCGCGAAACCCAAACTTTCATAGTACACTTCAGAGCCAGAGGCCCTTCTC
CGTCGAGCGCTCTAGTGCCAAAGGCGTACACAAAGCTCAGATCCGACATT
CCAAGGTTGGGGCTACATCCGAGAATATTCACGAGATCTGTTGAAAACGC
ACGAATGCACCCGTCTGTAAACGCAACTGATCCGTCCTCCGAATTGCCCT
TCGACGATATCCTACGATTCTGCGTGACAGGGCTTTTTCGAAGGGATTGG
TGGTGCCATCTACACTCGTGGCAACATCGTGATCGAGGGAGATAGCCAAT
TCTCCCTCAACATTGCGTCGGTGAACCTTTGTCGTTGAGCATAATTTAGC
TTGTGCGAGGAGGAGGCAAAGAAGCGAGCGCTCTTGACGTTACCCCGAAC
GCTGTTCGAACGCTATGCATTTGGCAGATACACACTTTCTTGGATCCATC
GTGGAAATCCATCCGGTCATTTTGACGATTGCAAGGGATTTGAATGCAAT
TAAGTGGGCTGTATCGAAAAGGCTGTGACGTTCGTTGTAGCCTCCACAAA
ATGTTAGATCGGTTCAAATTGGTGTGGTGCAAGCCTCGAGGGATACGAAG
GAGAGATGATGTTTTTTTTTTGGCGGCATGTGCCCACGGATGGAAGACGT
CCATTTGCTTGGTAAATGAGCGCATCCTACGCGCTCTCATTATTCACCGG
TCGACTTCACCACCACACCAACTACCTGTAATATTGTTTTTTGGTAGTAC
GACTTTCACCGCGAAGAAGGGACAGATTGATTCCGCTCACACACGAGCTG
CAGGTCAGCGGTGACCCTCTTCACAACCTTCACCTGTTTGTTTACGATTG
TTTATTCTGAGCAGAACGGCGGGGGAATTTATCAGACCGCGATTGGCTCC
TTGGTCTTCAACGGCATGGCGACATTCTCAGAGAACAGTGCATACGACGT
AAGTTTCGATTTGGAGTACTTTTTGCATGGAGATCAGCTCGAGTGGCACA
CCTTCGTCCGCCCATTCCCAAGGCTCCATGGAGATACATACAGGCTGCAC
CGAGCCCTTCATGGTTCAAGGAGGAATGATAATCCTTAAAAGGTTCCTTA
GCTAGCTCGGAGCATGCTTTTGCACTTGTGTTGTGCTCAGGGTAAACTTT
GCGTGCTTGAGTGTCCGCTATTCAACACTTGTCCTCATTACCACGGGGCA
TTTGGGCAAGCAAGAAAAGGTCAAATCTACGAATCGGAGCCGAGACAGTA
GGCTCAGGGAAACAAACATTGACACATTGTCCCACTTACCACTAGTTTCG
GTGGTCCTCTCTCGTACAACGAAGTGCGCGCTACATGTTACGGCTGTCTA
AACCCCTGATGATGGCACACCCATCCTATCAGCTACGTGGTGGTGGATTG
TACAACGGGGGCGGCGTCGTGGACTTCAACGGTGGAAGCCTCTTCGATGG
GAACGGGGCCAGTGGATCTGGTGACGGCGGTCAAGGTGGGGCCATCTACA
ACGGCGATGAAGGAGTCGTCACGTAAGTATGCGCGGCTATTCATGTATTT
ACGACGCTGTTTGAAATCCTTCGCGAAAAACGCCAGTTCGTGCCCTAGAG
ATTCCCCTCGCATCACCTGCTCATGACACCACGGGCGCCTGCACCACAGA
TACGTCCTAGTCAAGACTCGAGCCTGGTGGCATAGCATGTACTGCAATTT
GAATCCTGTGTATGTGTTTGCTTATAGGATTTTTTTTTGTCGTTCGTGCC
CCTTGGTCGTGGATGCTTCTCCCCCGTATCTGTGACTCCAGGTTGACGGG
CTCGACCACTTTCAGTTCGAACTCGGCCTACTGGGGGGGAGCTATTTACA
ACGACGACGGCGACGTGGAGGACGGCGAAGCGGCGTCGACCACGACGTTC
CCTGCAGACACTGTTTTCGTGGACAACAGAGCCGAGGTACGAGGACGTCG
GGCTTGTCCTCTTCGCTATCTCAGAAACCGCTGCTTCTCGAACTTTGACG
TTCTTGATAAGACTCGCCAGCGAATCATCGAACGAAATGTGCCAAACAGC
GCAATTCCTGGCAGGGTCACAGTGGTCACCGTCGCCAACAGATGGACGCT
ACAATCCCCCCGGAAGCCTTTGATTTTGTGGGCACTCAGGCGTGCTCGGC
GCTTCCTTTCTGATTGCGTCCGCGGGCCGTAGGAGAAACAGTTGGGTGCA
TGCTTGACTCTAAGCGAGGTGGCACGCAAGAGGAAATCCTCCAAAAAGAA
AACATCCTTGGCATAGAGTCCCCCAGCACCAAGACATACAAAACGCGTAG
GCCCCCCGAAGCAAGGAGACCGGGTTAGCGCTGACGAATTAGATGCGTGT
CCTCCGCCTATTCAATCCAATCGTGAGCTCGGATGATGTTTCTTCCCTGA
ATCGTGTTTTTTGCTGGTCTTCCTGGAAACCAGTCTAGGTCTTGTTGTCG
TTTCTGGCCACAACCGGACCGTTGTCAGCGAGCCGCCGTATGATGGACCG
TTCTTAGAGATCGCACCAGCTAAGCGTAGGTACCTATTTCCACCATAGCC
ATTAAGATTGCCTCTTGGCTGTTCATCCAACTACTCACAGGAACAAACCG
CCCGTCTTATCTCGTTCAATGCCCCGTGTGCCGTTTCCAATACCCCTTGT
GCCATCTCGTCTCGTAACCCCGCTTCGTACCGAATCAGTACTGCCCCAAT
GTGCACGACGGGGATAACGACAACTGCCCTGAAGTGTAAGCTTCATGGCC
CAGCAACCAACCAACCAGCACGTTGGATGGCGGACTCGATGTTTTTGTCC
CCAGTGGAGGGAGAATTTGGGTTAGAATGAGAACCTTCACGAGATTGTTT
GATTTCTAGCGCGTGCACCGACTAGCGTGTGTAGACATTATGGGCTTCAT
GACTGAGAAAGGAGACGACCGGCACCCGTGCGGACAGGATCGATACCGTG
CTCATCGGCCTGGGCCATTATCGGAGTTCGTTCCCGCGCGGATGCCGCAA
TTGACAAGATGTCGGACAATTTGATAATATCTTGTTTTCTCAGTATTACC
GTTCAAAAACCTGGCTTGGGGAAGACATGATAGGATGGCGACCCTGGTTT
CTCCAAAGCGCGTGCCAGTTAGCTCCCATTCGAGGTCTGCTGGATACACA
CTATGATGTTCTGATGAAAAATGGAGGTATTTCGGGGTCTAGCACCCTCT
TATTTTCGACTCCACAAAGCCGACGCTTTTCTTCGGACTAACACCAATCA
TTACCACGAGAAATGTGGTCGAGGAAATCACCCCGAAAGGGACGCCTTGG
AAGAGTTTCCCGAGGGAAATCGCCCATGGGGCGAGCATTGCCGTTTTAAG
CGGAGTTCCACCGAGAGCAGAAACCAAAACTTTTCTGCATTCTAGCGGAA
GTTGGTACGGGAGGAGAGAATTCTACGGGCGCAGCGGGGGATACTGCAGA
TCGCGGGATGTTGAGCGTGTATGAGGTTTGGATGGCATCGTGCCATCAGA
CATGGTATTTCTAGTTGCCGTTATTCCGTGCATTTCTTGCTGGTGGCCCC
ACAAGAATATGATCATAAGCCTTTTTTAAAGAAACATAACACGGTTAGAA
CACCTTCTGAGATACGTCGTGTGAGGCGTACCCCGAGGCTTCTGTTGAGT
TCAAAACAGTGAGGGTTCATTGACGGGGACAAAAGCATGAACAGGACAGA
GTTTGTTGGTAACCTACCGCAACTAGTTGAATGGAACAAATTAAAAGATA
CGCAATACTTCGAAAA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10049:381..4396-

>mRNA_H-canaliculatus_F_contig10049.82.1 ID=mRNA_H-canaliculatus_F_contig10049.82.1|Name=mRNA_H-canaliculatus_F_contig10049.82.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1062bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10049:381..4396- (Hapterophycus canaliculatus Oshoro5f female)
ATGGACGAGAACCGCGCATATATGGACGAGAACCGCGCATATGGCTTTTT
CGAAGGGATTGGTGGTGCCATCTACACTCGTGGCAACATCGTGATCGAGG
GAGATAGCCAATTCTCCCTCAACATTGCGTCGGGCTTTTTCGAAGGGATT
GGTGGTGCCATCTACACTCGTGGCAACATCGTGATCGAGGGAGATAGCCA
ATTCTCCCTCAACATTGCGTCGAACGGCGGGGGAATTTATCAGACCGCGA
TTGGCTCCTTGGTCTTCAACGGCATGGCGACATTCTCAGAGAACAGTGCA
TACGACAACGGCGGGGGAATTTATCAGACCGCGATTGGCTCCTTGGTCTT
CAACGGCATGGCGACATTCTCAGAGAACAGTGCATACGACCTACGTGGTG
GTGGATTGTACAACGGGGGCGGCGTCGTGGACTTCAACGGTGGAAGCCTC
TTCGATGGGAACGGGGCCAGTGGATCTGGTGACGGCGGTCAAGGTGGGGC
CATCTACAACGGCGATGAAGGAGTCGTCACCTACGTGGTGGTGGATTGTA
CAACGGGGGCGGCGTCGTGGACTTCAACGGTGGAAGCCTCTTCGATGGGA
ACGGGGCCAGTGGATCTGGTGACGGCGGTCAAGGTGGGGCCATCTACAAC
GGCGATGAAGGAGTCGTCACGTTGACGGGCTCGACCACTTTCAGTTCGAA
CTCGGCCTACTGGGGGGGAGCTATTTACAACGACGACGGCGACGTGGAGG
ACGGCGAAGCGGCGTCGACCACGACGTTCCCTGCAGACACTGTTTTCGTG
GACAACAGAGCCGAGGTTGACGGGCTCGACCACTTTCAGTTCGAACTCGG
CCTACTGGGGGGGAGCTATTTACAACGACGACGGCGACGTGGAGGACGGC
GAAGCGGCGTCGACCACGACGTTCCCTGCAGACACTGTTTTCGTGGACAA
CAGAGCCGAGTACTGCCCCAATGTGCACGACGGGGATAACGACAACTGCC
CTGAAGTGTAATACTGCCCCAATGTGCACGACGGGGATAACGACAACTGC
CCTGAAGTGTAA
back to top