Homology
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI)
HSP 1 Score: 167 bits (423), Expect = 3.830e-47
Identity = 96/110 (87.27%), Postives = 101/110 (91.82%), Query Frame = 1
Query: 10 FGADCSRRLLGLPTALRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
FG RLLGLPT LRLA LSRNITSPLAMAICS++GAD SLAIAIVV+TGVIGANFGAT LDALGV+DPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAV+MALTATA
Sbjct: 393 FGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLIGADPSLAIAIVVLTGVIGANFGATALDALGVKDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVSMALTATA 502
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A7S1ZXA6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZXA6_TRICV)
HSP 1 Score: 119 bits (297), Expect = 7.860e-31
Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPTA-LRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G FG RLL + LRL LSRNITSPLAMAI SM+GAD+ LA++ VV+TG+IGANFGA++LDA G+ DP ARGL G +AHGLGTAA NE AF F+A+ MALTA+A
Sbjct: 121 GGLFGTSLLVRLLAIADPILRLCMLSRNITSPLAMAIASMIGADVGLAVSTVVVTGLIGANFGASILDAFGITDPVARGLGVGAAAHGLGTAAFANEGDAFPFAAIGMALTASA 234
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A7S2R126_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R126_9STRA)
HSP 1 Score: 117 bits (292), Expect = 1.330e-30
Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPTA-LRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G FG R L + LRL+ LSRNITSPLAMAI ++GAD+SLA+++VVMTG+IGANFGA +LDA G+ D ARGL G +AHGLGTAA NEP AF F+A++MALTA+A
Sbjct: 72 GGLFGTAALVRFLKIANPMLRLSLLSRNITSPLAMAIAGILGADVSLAVSMVVMTGLIGANFGAAILDAFGITDAVARGLGIGAAAHGLGTAAFANEPDAFPFAAISMALTASA 185
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A0G4H6K0_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H6K0_VITBC)
HSP 1 Score: 120 bits (302), Expect = 9.530e-30
Identity = 68/109 (62.39%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 10 FGADCSRRLLGLPTALRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTAT 336
FG RL+GL + LRLATL R+IT+PLA+ + +M+GAD LA+A+VV+TG++GANFGA +L +LG+ +P ARGLA G +AHGLGTAA+VNE AF FSA+AMALTAT
Sbjct: 418 FGTAIGARLIGLASDLRLATLPRSITAPLAIEVANMLGADGRLAVALVVLTGILGANFGALLLTSLGITNPTARGLAMGSAAHGLGTAAIVNEGEAFTFSAIAMALTAT 526
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A1Z5JZL6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZL6_FISSO)
HSP 1 Score: 119 bits (297), Expect = 3.340e-29
Identity = 72/114 (63.16%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPTA-LRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G +G RLL + LRL+ LSRNITSPLAMAI ++GAD+SLA+ VV+TGV GANFGAT+L ALG++DP ARGL+ G SAHGLGTAA NE AF F+A+AMALTA+A
Sbjct: 362 GGLYGTALLVRLLDVGNPFLRLSLLSRNITSPLAMAIAGIIGADVSLAVTAVVITGVFGANFGATILTALGIKDPVARGLSIGASAHGLGTAAFANEKDAFPFAAIAMALTASA 475
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
B7FZ18_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ18_PHATC)
HSP 1 Score: 117 bits (294), Expect = 1.090e-28
Identity = 72/115 (62.61%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPT-ALRLATLSRNITSPLAMAICSMVG-ADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G FG + R L + A+RL+ LSRNITSPLAM+I S++G AD+SLA+++VV+TG+IGANFGAT+LDALG+RD ARGL G +AHGLGTAA+VNE AF F+A++MALTA+A
Sbjct: 388 GGLFGTAWAVRFLSIGNPAVRLSLLSRNITSPLAMSIASILGGADVSLAVSMVVITGLIGANFGATLLDALGIRDAVARGLGMGAAAHGLGTAAIVNEKDAFPFAAISMALTASA 502
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
B8CB30_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB30_THAPS)
HSP 1 Score: 115 bits (287), Expect = 1.040e-27
Identity = 68/114 (59.65%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPTAL-RLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G +G + RLL + + RL+ LSRNITSPLAMAI S++GAD+SLA+ IVV+TG+ GANFGA++LDA G++D ARGL G +AHGLGTAA +E AF F+A+AMALTA+A
Sbjct: 391 GGLYGTAAAVRLLNIVNPMIRLSLLSRNITSPLAMAIASILGADVSLAVTIVVLTGLFGANFGASILDAAGIKDSVARGLGIGAAAHGLGTAAFADEKDAFPFAAIAMALTASA 504
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A7S3VAA5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAA5_9STRA)
HSP 1 Score: 115 bits (287), Expect = 1.080e-27
Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 1 GDHFGADCSRRLLGLPTA-LRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALTATA 339
G FG RL + LRL LSRNITSPLAMAI ++GAD+SLA+++VV+TG+IGANFGA +LDA+GV+D ARGL G +AHGLGTAA NE AF F+A++MALTA+A
Sbjct: 396 GGLFGTAAMARLFNVGNPMLRLCLLSRNITSPLAMAIAGILGADVSLAVSMVVVTGLIGANFGAAILDAVGVKDAVARGLGIGAAAHGLGTAAFANEKDAFPFAAISMALTASA 509
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A7S2Y5J7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5J7_9STRA)
HSP 1 Score: 114 bits (286), Expect = 1.860e-27
Identity = 70/112 (62.50%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 1 GDHFGADCSRRLL--GLPTALRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAMVNEPTAFAFSAVAMALT 330
G FG RLL G PT +RLA LSRNITSPLAMAI ++GAD+SLA+++VV+TG++GANFGA++L ALG++D ARGL G +AHGLGTAA+V+E AF F+A+AMALT
Sbjct: 447 GGLFGTAAIVRLLEIGDPT-IRLALLSRNITSPLAMAIAGILGADVSLAVSMVVITGLLGANFGASILSALGIKDAVARGLGIGAAAHGLGTAAIVDEKDAFPFAAIAMALT 557
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Match:
A0A7S0EAH9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EAH9_9EUKA)
HSP 1 Score: 107 bits (267), Expect = 2.140e-27
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 10 FGADCSRRLLGLPTALRLATLSRNITSPLAMAICSMVGADLSLAIAIVVMTGVIGANFGATVLDALGVRDPAARGLAQGGSAHGLGTAAM-VNEPTAFAFSAVAMALTA 333
FG R +GLP+A+RLA + R +T+PLA+AI M+GAD SLA IVV+TG++ ANFGA LDA+ +DP ARGL G + HGLGTAAM +EP AF F+A+AMAL A
Sbjct: 26 FGTAAFARYIGLPSAVRLAAVPRQVTAPLAIAIAGMLGADPSLAATIVVLTGLVVANFGAAALDAIKCKDPVARGLTMGAAGHGLGTAAMSASEPDAFPFAAIAMALNA 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10033.69.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.83e-47 / Id = 87.27 Expect = 7.86e-31 / Id = 62.28 Expect = 1.33e-30 / Id = 61.40 Expect = 9.53e-30 / Id = 62.39 Expect = 3.34e-29 / Id = 63.16 Expect = 1.09e-28 / Id = 62.61 Expect = 1.04e-27 / Id = 59.65 Expect = 1.08e-27 / Id = 60.53 Expect = 1.86e-27 / Id = 62.50 Expect = 2.14e-27 / Id = 57.80 Sequence D8LU31_ECTSI A0A7S1ZXA6_TRICV A0A7S2R126_9STRA A0A0G4H6K0_VITBC A0A1Z5JZL6_FISSO B7FZ18_PHATC B8CB30_THAPS A0A7S3VAA5_9STRA A0A7S2Y5J7_9STRA A0A7S0EAH9_9EUKA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 169.5 Seed ortholog evalue 9.1e-40 Seed eggNOG ortholog 2880.D8LU31 GOs GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006996,GO:0008028,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008643,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009657,GO:0009658,GO:0009706,GO:0009853,GO:0009941,GO:0009987,GO:0015075,GO:0015144,GO:0015238,GO:0015318,GO:0015665,GO:0015711,GO:0015718,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016043,GO:0019866,GO:0022857,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0034219,GO:0034220,GO:0042170,GO:0042221,GO:0042493,GO:0042873,GO:0042879,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043879,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071840,GO:0097339,GO:0098656,GO:1900866,GO:1901618,GO:1901974,GO:1901975,GO:1903825,GO:1905039 EggNOG free text desc. LrgB-like family EggNOG OGs 2QQ63@2759,COG1346@1 COG Functional cat. M Best tax level Eukaryota Best eggNOG OG NA|NA|NA Hectar predicted targeting category signal anchor Exons 2 Model size 339 Cds size 339 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928631.9693005-CDS-H-canaliculatus_F_contig10033:464..673 1622928631.9693005-CDS-H-canaliculatus_F_contig10033:464..673 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10033 465..673 + 1696845503.7305303-CDS-H-canaliculatus_F_contig10033:464..673 1696845503.7305303-CDS-H-canaliculatus_F_contig10033:464..673 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10033 465..673 + 1622928631.9827144-CDS-H-canaliculatus_F_contig10033:1564..1694 1622928631.9827144-CDS-H-canaliculatus_F_contig10033:1564..1694 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10033 1565..1694 + 1696845503.7494633-CDS-H-canaliculatus_F_contig10033:1564..1694 1696845503.7494633-CDS-H-canaliculatus_F_contig10033:1564..1694 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10033 1565..1694 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10033.69.1
>prot_H-canaliculatus_F_contig10033.69.1 ID=prot_H-canaliculatus_F_contig10033.69.1|Name=mRNA_H-canaliculatus_F_contig10033.69.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=113bp
GDHFGADCSRRLLGLPTALRLATLSRNITSPLAMAICSMVGADLSLAIAI back to top mRNA from alignment at H-canaliculatus_F_contig10033:465..1694+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10033.69.1 ID=mRNA_H-canaliculatus_F_contig10033.69.1|Name=mRNA_H-canaliculatus_F_contig10033.69.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1230bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10033:465..1694+ (Hapterophycus canaliculatus Oshoro5f female)GGGGATCATTTTGGTGCTGACTGTTCGCGCAGGTTGCTCGGACTCCCCAC
GGCCCTCCGACTAGCGACCCTGTCGCGCAACATCACTTCCCCATTGGCGA
TGGCTATCTGCTCCATGGTGGGAGCCGACCTCTCCTTAGCGATTGCTATC
GTGGTGATGACGGGCGTGATCGGGGCTAACTTCGGGGCGACGGTGCTGGA
TGCTCTCGG GTACGTACGCGCAGTCCACCGTGAGGGGTTAAGGCCACGGC
CAAAACAAGGTCGGTGTGTGCGCGCTCGGAAATCGTAGGGTTACCCATAT
CCCGATGCTGCGTTGATCGCGGGAAACTTCGACGACCTTGTTTGTCTTCG
AGGGCGACGGGGCGCGTGCGCTTGCCATGCCCGCCTCTGAAGAACGGTTC
CAGCAGTGGTGAAAGGCCGTATTTTCTGATTTCGGCCCTTTCTTTCCTTA
ATACTTCGAAGTAGTTGTTTTTGTTGCGCACCATGTTGACAAGCTTCCAC
AAGGTATGCAGAGCACAAATTAGTGCTTAGTCTGCCAAAACCAAAAAAAG
GAAACATGAAGGAACAAACAGGGAAAAATATACCTTCGAATCGAAAAAAA
CTAAGCTTACCTTCCTCCCGGAAATGAAATCTCCCTTTTCAGACCGTTTG
CGCACGCTTCTGAGTGGACAAATAAAAAAAACAACGCGGATTCGAACCCC
CAGCCTTTCCTATGCAGATGAACGGAAGCCTCCATTTCACCACTACAGTA
AGGCACACAGCACTCCCTTCTCGCCCCCTCCCCGTTATTTACCCTTGCTT
TTTACCTGCTAAACAGAACCAAACTACAAAGTACGGAGTGAAGAGTAAAG
AGCCTCGGATACATCAGGTAGTCGGACCTGGGGCGCTACGCAGATGAAAG
GGTAGTGATGATACTCGTGCCTCTTGGATGATATCTCTTACATGTCCTCC
GCCCCCTTGTACGTCGCCCTCCCCTCCTGGCGCTCGCCTGTCGACCCCCA
CGAAATATTTCGCCCACCAAAACCGACTTCCGTAACTACCGCCGCTACCA
CGCGTGGGCATCATCATCGCCACCGCCGCCGCCGCCGCCGCCGTTGGTAG
GGTGAGAGACCCCGCAGCGCGAGGCCTGGCGCAAGGCGGAAGTGCGCACG
GCCTGGGCACCGCCGCCATGGTCAACGAGCCCACGGCTTTCGCATTTTCG
GCGGTGGCCATGGCCCTCACGGCAACTGCT back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10033:465..1694+
>mRNA_H-canaliculatus_F_contig10033.69.1 ID=mRNA_H-canaliculatus_F_contig10033.69.1|Name=mRNA_H-canaliculatus_F_contig10033.69.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=678bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10033:465..1694+ (Hapterophycus canaliculatus Oshoro5f female) back to top