Homology
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
D7G4Z4_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z4_ECTSI)
HSP 1 Score: 374 bits (959), Expect = 1.110e-119
Identity = 189/210 (90.00%), Postives = 197/210 (93.81%), Query Frame = 2
Query: 488 GGVRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAVF 1117
GGVRGLKAVA ESTDV+SP+ G EDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLT+NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LT+ P +++P A+F
Sbjct: 35 GGVRGLKAVAAAESTDVISPQ--GEEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD----GPPTIVPPAMF 238
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE)
HSP 1 Score: 367 bits (943), Expect = 2.220e-111
Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 2
Query: 488 GGVRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
GGVRGLKA+A ESTDV+SP+ G EDKMGEYIK+RGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLT+NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LT+
Sbjct: 35 GGVRGLKAIAAAESTDVISPQ--GEEDKMGEYIKSRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD 227
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A7S2B655_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B655_9STRA)
HSP 1 Score: 271 bits (694), Expect = 1.520e-85
Identity = 132/176 (75.00%), Postives = 146/176 (82.95%), Query Frame = 2
Query: 518 MTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 1045
M+ +T G D + EY++ GG+ PIRK+LIANNGMA TK+ILSMR+W Y ELGDE AV+FVAMATPEDL ANAEFI+LADA VEVP GKNSNNYANVD+IVD A + VDAVWPGWGHASENP+LPT LTE GIKFIGPTAPVMSVLGDKIAANILAQTA VPSIPWSG
Sbjct: 80 MSLATPASPTTSAGSTDALEEYVQKHGGNRPIRKVLIANNGMAATKSILSMRKWAYFELGDENAVQFVAMATPEDLKANAEFIKLADAYVEVPAGKNSNNYANVDIIVDVAKEYNVDAVWPGWGHASENPKLPTALTELGIKFIGPTAPVMSVLGDKIAANILAQTANVPSIPWSG 255
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA)
HSP 1 Score: 286 bits (732), Expect = 4.080e-83
Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 2
Query: 566 DKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
D M Y++ GGSLPIRKILIANNGMA TKAILSMRQWCYLELGDEKA+EFV MATP+DL ANAEFIRL+D I EVPGG N NNYANVDLIV+ A ++ VDAVWPGWGHASENP LP RL+++GIKFIGPT+PVM+VLGDKIAANILAQTAKVPSIPWSGDGL A LT+
Sbjct: 14 DAMAAYVEKHGGSLPIRKILIANNGMAATKAILSMRQWCYLELGDEKAIEFVVMATPDDLAANAEFIRLSDGIAEVPGGSNRNNYANVDLIVELAKRENVDAVWPGWGHASENPALPRRLSDDGIKFIGPTSPVMAVLGDKIAANILAQTAKVPSIPWSGDGLTADLTD 182
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA)
HSP 1 Score: 286 bits (731), Expect = 5.560e-83
Identity = 140/196 (71.43%), Postives = 159/196 (81.12%), Query Frame = 2
Query: 527 STDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAV 1114
S + P + D + +Y++ GGSLPIRK+LIANNGMA TK+ILSMRQW Y+ELGDEKA+EFVAMATPEDL ANAEFI+LAD+ VEVP GKNSNNYA+VD+IV A+ +GVDAVWPGWGHASENP LP L NGIKFIGPT+ VMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT+ R + A V
Sbjct: 53 SATISPPSEVAVTDNLSKYVEEHGGSLPIRKVLIANNGMAATKSILSMRQWAYMELGDEKAIEFVAMATPEDLKANAEFIKLADSFVEVPAGKNSNNYASVDVIVKIAVDKGVDAVWPGWGHASENPLLPETLLANGIKFIGPTSSVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTDDGRIPEETFNKAMV 248
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A813EQ02_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EQ02_POLGL)
HSP 1 Score: 263 bits (671), Expect = 3.650e-82
Identity = 135/193 (69.95%), Postives = 148/193 (76.68%), Query Frame = 2
Query: 494 VRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
V A A E D V K + K+ EY+ ++GG+ +RKILIANNGMA TKAILSMRQW YLELG + EFVAMAT EDL ANAEFIRLAD +EVP GKN NNYANVDLI + A QGVDAVWPGWGHASENP+LPT+L GI FIGPTAPVMSVLGDK+AANILAQTA VPSIPWSGDGL A L E
Sbjct: 107 VTACSATATLEKGDAVVTKADAAK-KLEEYVFSKGGNKVLRKILIANNGMAATKAILSMRQWAYLELGLDNVFEFVAMATREDLEANAEFIRLADTFIEVPAGKNVNNYANVDLICEIAKSQGVDAVWPGWGHASENPKLPTKLKSMGITFIGPTAPVMSVLGDKVAANILAQTAGVPSIPWSGDGLVAELNE 298
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA)
HSP 1 Score: 280 bits (716), Expect = 5.650e-81
Identity = 136/185 (73.51%), Postives = 154/185 (83.24%), Query Frame = 2
Query: 515 AMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT 1069
A T + +SP+ +D + Y+K+RGG+L IRK+LIANNGMA TK+ILSMRQW Y+ELGD++A+EFV MATPEDL ANAEFIRLAD VEVPGG N NNYANVDLIV A ++GVDAVWPGWGHASENP+LP L + GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT
Sbjct: 87 AATMAPPALSPEAQKKKDAVAAYVKSRGGNLAIRKVLIANNGMAATKSILSMRQWAYMELGDDRAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQMAQREGVDAVWPGWGHASENPRLPNTLKQLGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 271
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC)
HSP 1 Score: 279 bits (713), Expect = 1.420e-80
Identity = 138/189 (73.02%), Postives = 154/189 (81.48%), Query Frame = 2
Query: 503 LKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT 1069
L A M + +SP +D + Y+K+RGG+L IRK+LIANNGMA TK+ILS+RQW Y+ELGD+KA+EFV MATPEDL ANAEFIRLAD VEVPGG N NNYANVDLIV A ++GVDAVWPGWGHASENP+LP L E GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT
Sbjct: 87 LSAATMAPPS-TLSPAAQKKKDAVAAYVKSRGGNLGIRKVLIANNGMAATKSILSIRQWAYMELGDDKAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQVAEREGVDAVWPGWGHASENPRLPNTLKEMGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 274
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
K8EIK1_9CHLO (Acetyl-CoA carboxylase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIK1_9CHLO)
HSP 1 Score: 277 bits (709), Expect = 4.870e-80
Identity = 137/204 (67.16%), Postives = 157/204 (76.96%), Query Frame = 2
Query: 506 KAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAVF 1117
KAV E + + S D K+ EY+ N+GG IRK+L+ANNGMA TKAILSMR+W Y ELGDE A++FV MATPED+ ANAEFIR AD +EVPGGKN NNYANVDLI + A+++GVD VWPGWGHASENP+LPT L +NGI+FIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT P +P F
Sbjct: 70 KAVREPEQSSMASASD-----KLAEYVANKGGKRVIRKVLVANNGMAATKAILSMRRWAYNELGDENAIKFVVMATPEDIGANAEFIRYADDFIEVPGGKNVNNYANVDLITEIAVREGVDGVWPGWGHASENPKLPTALKKNGIQFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLVANLT------PEGTIPQETF 262
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match:
A0A1E7FNT7_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNT7_9STRA)
HSP 1 Score: 277 bits (708), Expect = 6.590e-80
Identity = 133/178 (74.72%), Postives = 153/178 (85.96%), Query Frame = 2
Query: 512 VAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 1045
++ E++DV + ED Y+K RGG+L I+K+LIANNGMA TK+I+SMRQW Y+ELGDEKA+EFVAMA+PED+ ANAEF+RLAD+ VEVPGG N NNYANVDLIV A++QGVDAVWPGWGHASENPQLPT L +NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG
Sbjct: 53 LSTLEASDVTTSVTTSVED----YVKGRGGNLAIKKVLIANNGMAATKSIMSMRQWAYMELGDEKAIEFVAMASPEDINANAEFVRLADSYVEVPGGSNKNNYANVDLIVKLAVEQGVDAVWPGWGHASENPQLPTNLAKNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.11e-119 / Id = 90.00 Expect = 2.22e-111 / Id = 93.85 Expect = 1.52e-85 / Id = 75.00 Expect = 4.08e-83 / Id = 80.47 Expect = 5.56e-83 / Id = 71.43 Expect = 3.65e-82 / Id = 69.95 Expect = 5.65e-81 / Id = 73.51 Expect = 1.42e-80 / Id = 73.02 Expect = 4.87e-80 / Id = 67.16 Expect = 6.59e-80 / Id = 74.72 Sequence D7G4Z4_ECTSI A0A6H5L0S0_9PHAE A0A7S2B655_9STRA A0A836CCC4_9STRA A0A7S2F2I2_9STRA A0A813EQ02_POLGL A0A0B4L7Y6_9STRA I2CQP5_NANGC K8EIK1_9CHLO A0A1E7FNT7_9STRA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Viridiplantae Seed ortholog score 275.4 Seed ortholog evalue 3e-71 Seed eggNOG ortholog 41875.XP_007511713.1 KEGG rclass RC00040,RC00253,RC00367 KEGG ko ko:K11262 KEGG Reaction R00742,R04385,R04386 KEGG Pathway ko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04922,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04922 KEGG Module M00082 EggNOG free text desc. acetyl-coa carboxylase EggNOG OGs 37HYK@33090,COG0439@1,KOG0368@2759 EC 2.1.3.15,6.3.4.14,6.4.1.2 COG Functional cat. I Best tax level Viridiplantae Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000 Hectar predicted targeting category chloroplast Exons 5 Model size 1117 Cds size 873 Stop 0 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928631.7872682-UTR-H-canaliculatus_F_contig1003:25268..25512 1622928631.7872682-UTR-H-canaliculatus_F_contig1003:25268..25512 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig1003 25269..25512 + 1696845503.5938983-UTR-H-canaliculatus_F_contig1003:25268..25512 1696845503.5938983-UTR-H-canaliculatus_F_contig1003:25268..25512 Hapterophycus canaliculatus Oshoro5f female UTR H-canaliculatus_F_contig1003 25269..25512 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928631.8083208-CDS-H-canaliculatus_F_contig1003:25512..25585 1622928631.8083208-CDS-H-canaliculatus_F_contig1003:25512..25585 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 25513..25585 + 1696845503.610497-CDS-H-canaliculatus_F_contig1003:25512..25585 1696845503.610497-CDS-H-canaliculatus_F_contig1003:25512..25585 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 25513..25585 + 1622928631.822879-CDS-H-canaliculatus_F_contig1003:28483..28785 1622928631.822879-CDS-H-canaliculatus_F_contig1003:28483..28785 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 28484..28785 + 1696845503.6212578-CDS-H-canaliculatus_F_contig1003:28483..28785 1696845503.6212578-CDS-H-canaliculatus_F_contig1003:28483..28785 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 28484..28785 + 1622928631.8408258-CDS-H-canaliculatus_F_contig1003:29721..29841 1622928631.8408258-CDS-H-canaliculatus_F_contig1003:29721..29841 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 29722..29841 + 1696845503.639609-CDS-H-canaliculatus_F_contig1003:29721..29841 1696845503.639609-CDS-H-canaliculatus_F_contig1003:29721..29841 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 29722..29841 + 1622928631.8618279-CDS-H-canaliculatus_F_contig1003:30652..30772 1622928631.8618279-CDS-H-canaliculatus_F_contig1003:30652..30772 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 30653..30772 + 1696845503.6517148-CDS-H-canaliculatus_F_contig1003:30652..30772 1696845503.6517148-CDS-H-canaliculatus_F_contig1003:30652..30772 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 30653..30772 + 1622928631.876256-CDS-H-canaliculatus_F_contig1003:31230..31488 1622928631.876256-CDS-H-canaliculatus_F_contig1003:31230..31488 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 31231..31488 + 1696845503.6621673-CDS-H-canaliculatus_F_contig1003:31230..31488 1696845503.6621673-CDS-H-canaliculatus_F_contig1003:31230..31488 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig1003 31231..31488 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1003.67.1
>prot_H-canaliculatus_F_contig1003.67.1 ID=prot_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=291bp
MHKRRHGGGAFAAFLISRLVGNGSAFVPSALTPKGAGSVGGGGGGNAIQS back to top mRNA from alignment at H-canaliculatus_F_contig1003:25269..31488+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1003.67.1 ID=mRNA_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6220bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:25269..31488+ (Hapterophycus canaliculatus Oshoro5f female)CTCCAGTCCGGAAGAGAGATACTGAGGGAGGGGGAGAGAGCAAAGGAGAG
GGAGAGGGAGACCGGCGCCGAAAGCTCGAAGGCAGATTTCGAGGAACGGC
CTGGCGGTACTATACAGCCGCACCGCCGCCGTCGGCAGGCACGCCCGCGG
CCGCCGCTCGACTAGCTGGAACAGCCCTCTCGCCGGCTGCTTCTCAACCG
AACGTCTATCACACTGGCCCTCAGCGGCGCTAGCGGCAGACGCC ATGCAT
AAACGCAGGCATGGGGGGGGTGCCTTCGCAGCATTCCTGATATCCCGGTT
GGTCGGGAATGGATCAG GTGAGACAGCATACCTGCTGCGGGGCGCGTTGT
GTTTTTTTGTGTTGCTCTTGATGCTGTGATCCTGTCCCGGAATTTTGGGA
TATGTCCCCCGTCCTCCTTGTTCGGTATCCAGCAAACGTGCGAGAGGCGT
CCGCATGCACAGCAGGCGGCCTGGCAGCTCATGCCCGCAGCTACCTCCCC
ATGCATGTACACACGTTCCGGGGGGCCAGGCACGATTCCTCCCGCGACCT
GCTGCTTGCAGCGCTCTGTTGGGTTCAAGCCAGCAGCTCGTTTGTTCCTG
TTTCCAACAGCACTTGGGGTGTGTTGCCGTGCCTTGTGTCTTGTCCTCCG
TCTCGCGTCTGTCGTCTGCTCTCCTCGTACGCACCCTACATGCACCTCCT
TTCACCTCTCTCGCTCTCCATTCCCACTCCCTGGACACCCGAACACCGAC
GATGATGGCAGCACCAGCGGCGAAAGTCCTTCGCCTAGAAAGCGTCCGCA
GGGAATGGCAACCTCGCCCCTTCCCCCTGCGGCGAAAAATGACCGACCTC
GAGGACAAGCATCAAGTCAGCGGATTGCGCATGCAGACACACGCCCTTTT
CCTTGAAAAAAAAAAAAGGAGGGCAGGAAAGCCAAACAAACAACAGCCGC
GAAAGTATGATATTTTTGAAAGTTCCTCGCCAGCCCCCGCCAAGCCCCCT
TCTTCGTTACTTGCTGTACGTTACACCGTGAGGAGCAGGACAGCAGCAGC
GACCCAGCTGTTTCCAACGGTGCAGCTCCCGTGGCTGGGCCGTGCGGTCT
AGCCGGATGGCGCGGAAGCATGCGGTCCAGCCGTGCGCACACACGGACGG
GAGCTCGCCGCCTCCAGTGCATAGCGTTCTCCCCAGCAACGATTTGCGAT
GTTCGCCCTACTGCTCTGTGTGCGGGTACAAGTACGAAGACGAAAAATCG
TTCTTCAAGTTGCGGACGGGATTTTTTGATTTTTTCTCTAGACTGAAGGC
GAGAAGGGGAAATGTTGCAGAACGAGTACCCTGCTGTACGTACTGCTGTA
GGGGAAACAGCCTCTCGACATGTTCTACTTGAGTACCAGAGATGAAGATG
TCGGCGATGACGGGGTGCAGACCCTTCCGCCTCATCGCTTGCTGGCGGGA
TTGGATTCTACGAGCACCCAGGTGTACCACAGTCCACCTCTAGTCGAAGA
GAACCCGTGGCAACAAAAGAAGCAACATACAGCACAGCAAAGCACAGCAG
CAGCAGCAGTGTCCTGCGACGGGCGCTGTCCAAGCCGCCCGTTTGTCGTT
GGTACGTGAGGCTGGATGGGACTCGCCTTTCTTTTTTTTTCCAAATCATG
ACGTCGATTCATCCTGAACTAAAACCATGCACAACACACAAGTTTTCCCT
TGATTGATGACTATCAGAAGTTTATTCCCCTCGCATCTCCGCCGTATATT
TTTTAGCTGCTCAGCTACACGCAAACCAGGTCCTTGGAACTACGGGAGTG
TTGTGTGCCTTGAACAGCATCTTATTTATTTATCCACAGGTGCTGCCGTG
TCTCCCCTGTGGCACAAGATATACAGCTCGGGCGTCAACTCTTGCGGAGT
CCGAGTAAACCCGTAAAACGGGTTCGTAAGAGGGGAACGAAACACACATC
CGCACGAGCAGTTATTTGCCTAGATCTACGGATGCTGCATCCCTGTTTCG
CAGCAGCAGGGTAAAGGTGGCACCGCGCTCAGCAAGCGCGTCGTCGCGAG
CGAGCGGTCACCTGTCTCCAGTCCCTCTGCACGGTACGTGTGCAGCAGTG
CAGCCGTGCAGGCGAGGGGAGAGGGGGGGATCTACGAGAGCGACCCTTTA
AGCTCCGCCGCATTCACCTCCCCTTAGATGCTTCCGAGACCCCGCTTCCC
GCGCGTCTGTTTGGTACGTCGTGTGTGTCCTTGCTCCTCGACCGAAACTA
CGCGTCTCGAACACGGTCTCGTACACTCACGGCAGAAGCGGTTTCGGTTC
TGGCCTTCGTCTCGGGGTTTGACGCCGCCCCCCTCCTCACGGCTCCCCGC
TTTCGAACTTACACGTTCAGTACCTGGTACATCCCTGGGATCGTCTCGCG
CAGCCGGCGGTCGGCCGCAGCAGTGCAACTCTGCCGTTGTCTTTTTGTCT
TACGGCCACGCACAGAAAGGCAAACGAAGGACCTCTCTGCGCCTTGTTCA
AAGTTATTTTCTTCTCGTGTACGCTTGATTTCTTGGGCGCGAAGCGGGTG
AGGCGGCCTTTCCGAACGCCGACAGCATCTCACCCCTCCCAAGGCTCGAA
GCTCTTGGTATCGTCGAAAACCATTGTTGCTCAGTTGGTCGCCTTGGTGT
TTCGCCCCCGGTATTTTTCGTCCTCTGTTGTCCGTGCTGGTGGGGATGCT
GTTTCCCGTTTTTTCCGCATGTCTCTCTCCGCTTGGGCCTCTTGTGCAGG
GATGCACATGTGTCTGGCCCGTGTGTCCTTCGATTCTCTACCACGGTATC
GTGCAAGTTTTCAGTGTTGAATCATCGCGTCGAGGGCACTCTACTCTTAG
GGCAAGGACGGCGGCGGAACCAGCGACGACGACGGCAACAACAACAACAG
CCACAAACCTGACGTATCAAAAAAGATGCCGCCAAACAACGGCAGCGGCG
GTGGCAAGGAAGGGAAGGAGACAAAGCATGCGCCCTTACACCGGGGGTAG
GGGATGGGTGACGAACGCTCGGCGCTTAGGCGGCTCACGAGCCATCCTCA
GCAACTCCCCCTGCAGTGATCCTCTTCCTCCTCCCGCCGCCCCCGCCGCG
CTTCATCGGGCCCAAGAACGCAGTCCAAGTAACCCCACCCCTCACCCCAA
CCCCAACCCCACCCCCCCCCCCCCAACCGATGTTTCGTCCCCGTCGTCCT
CTTGCTCCCGTTCAGCCTTCGTGCCGTCGGCGCTGACACCCAAGGGGGCC
GGTAGCGTTGGGGGCGGCGGCGGCGGCAACGCCATCCAGAGCTCCGCACG
CTCGTCGAGCTTTGCGACGGCAGCCTCTTCGTCTTCCTCCTCTTGCTTTC
TCCCAACCGCGAGGGGCTCCGTGTGCTACGGCGCGGGAGGGGTCAGGGGG
CTGAAGGCGGTTGCCATGACGGAGAGCACGGACGTGGTGTCTCCCAAGGA
CGGCGGCGGCGAGGACAAGATGGGGGAGTACATCAAGAACCGCGGCGGGT
CTCTTCCGATCAGAAAG GTGCCTATGCGCGCGCGTGCGTGTCTTCGTGCG
TTCGTGCGTGAGATTGTTCGCGTGTGAGCGTGTTCAATCGCATCGGCACG
GCTCGCAGCCGCAAAGAATTGATGAAAAGACGCCGGTGTAATGATTCACG
TGAGCGTGTAAGCGAGTTCAACACCTATCACCGGCACACACCCCCCCGCA
GGCTTAAGATCGGTGAGAAGACGTCGGCTATCAGCAGGAGATTTAAAAGC
TACTGCTGTAGCTCTCCTTCTGCAGATGAAAGCTTTCGCCGATTATCGGA
GGCCCCGCGGAAGAGCTGACCTCTCGGACTGTTTTTGTTTGTGTTCGTGG
GTGCGTGGATGCGTGGGTGTGCCAGCGGCGTATCTTTTTCTCTCCTGTAT
CGCTCTGTCTATCGTGCTGTCGTCGCTCTCTTCTGATTGGTTGTTGGGCA
AAAGACGGAATCGTGTGCCGGCATAGACTTTTTCTAGCGAGGGGTGATGC
CTGTGTGTCTCTGTTGTCCATGTGTATGTATGTCTTTGACCGCCTGGCCC
TCTCTTACCCCTCTCTCTCTGTGCGTGTCTGTATGCGTTTGTCTCGCTCC
CGGAGCGGTCGAATGCCGTGTTGTAGTAAATAATGGAAAACGCGAGGCGG
GTAGATGGGTAGGTGCAACGCCCGGCCAGCCATCTAAATGCGAGCAATTG
ACCGCCCTCACGGTCGTCGACGTTCTTGTCGCCGCCGTCGTCGTCGCCGC
CGGGCAAGATGGGGGCGGCGACGATGCGCGCAAAGAGGCCAACGAGAGAG
ATGGCAAGAGAAACATATACTTGAAGAGCTGCATCGCCAGCACCGCAGTC
AAGGCTCCTTCCATCCCCGCCCAGACTCCGACCGTCCTTCCTTGCCCTCG
CTCTGTGCTGACTTCTCTGTGTCTCTTTTTCTCCCTACGATTCTCCCGAC
CAGATCCTGATCGCCAACAACGGCATGGCCGGCACCAAGGCCATCCTGTC
GATGCGGCAGTGGTGCTACCTGGAGCTGGGGGACGAGAAGGCGGTGGAGT
TTGTGGCCATGGCGACCCCGGAG GTAAGGAAAGAAAACAAAAAAAAATGC
GCACGCGACGCTTGCCCTTTCAGCGCAGAGATATCGTGACGCGCGGTACA
CAGGCGTGTGGAGTAGGCGATGCCGAAGAGAAGAGACGTTTCGTTTCCGA
CCACGACACACCCCTAACGCACGGGGCGAATGCGAGGCCGGGGAAGGGGG
ATCGGGCAGGGTGACAAAAAAAACAAGCTTCTTGTTTTCGAGACGCGACG
AACGGAGCCGGGAAGAGTCGAGGTAGGTCTCTCTCCGCCAAGCCCGAACT
TTCTCGCGTGCGGACGTTGCCCTGCGATTTCCGTGTCCCCATGTCTTTCG
GTGCTGCTGCTGCTGTTGGTGGTGGTGGTGTTGTTGTTGGAGGAGGTGAA
GCCCTTTGCCTCTCTTGGGAAGGTTGCCGACGCTTATCCACTCTAAGGCG
GTGCACGCACAAGAGGAGAACATGAGGATGGGCACGGGGGCAGGGGGGGG
AGGGGGGGGGGGCACGCGGAGGACGTGTTTGTCCTTGATGGTTGTCGATG
TTTGCGGTCTTCTGTTAAGCCGGGGTAGCTGGCGGTTCGCCGGCGAGCGT
GGATGGCAAGCGGAGGTGGCAAAATACAGCAGGCTCGTACGGAAAGAGGT
CTCACGAGGTTTGATCGCAGAGGTTCAGCGAGCACGTTTGCAGCGGTAGT
TGTGTAGAAGGCCGATGGTGTGGTTGTCAAAGATGCGTGGGAGGTTGGCC
GCGGTGTGTTAACGTCGATTCGTTTTCGTACCAATGGATGCCGCCCCCGC
ACCATCTCCGCCGCTCCTCCCGCTGCTTCCCCAGGACCTGCTGGCAAACG
CGGAGTTCATCCGGCTGGCGGACGCCATCGTCGAGGTGCCCGGGGGCAAG
AACAGCAACAACTACGCCAACGTCGACCTTATCGTGGACACCGCCATCAA
GCAG GTGCGTCGCTGGGCAGGCCTCGTAGACTTGCGCACGGCGGCGCCGA
GCGGCGCGCCGGTTTCGCCAAAAACCCTGGCGTCGCGCCAACAAACCCTG
GCGGTGTGTAGTCCGTGGGTGCCCCTCCCCGCTCTGCCGTGCTCGTTCTC
AGCCCCGAAGTGTCCACCAGTGGCACACAGAAGAGGAGGAGGGCCTTCTT
TTTTCATCGTTTTACGAATATTTTTGACCGCTTCCACCCCCCAACATCCT
GTTATCTTTTCCCTCAAGTAGCCCCCTTGACCCCCCCTCCGGGCGGCGAA
AGTCGTCCCACCACTTTCCTACTGATCCGCAATTTCATCCTGTCACTCGC
ATGGAACCCTCACTGAATGGGATTGACTAAAGCCCCTTGAGATGGACAGT
GTCTCAGGTCTGTGTTCCTTCGGTGTCGCTGACTTGTTTTGTAAAAACGT
GGAAAACAACAGGGGGTGGACGCCGTGTGGCCCGGATGGGGGCACGCCTC
CGAGAACCCTCAGCTGCCCACTCGCCTGACAGAGAACGGGATCAAGTTCA
TCGGTCCCACCGCTCCTGTGATGTCGGTGCTCGGCGACAAGATCGCCGCC
AATATCCTGGCTCAGACCGCCAAGGTGCCGTCGATCCCCTGGAGCGGCGA
CGGGCTCGAGGCCGTCCTGACCGAGGTGCGTAGGTTTCGTCCGCATTCGT
TGTTGCCTGCTGCTGTTTTT back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1003:25269..31488+
>mRNA_H-canaliculatus_F_contig1003.67.1 ID=mRNA_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1746bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:25269..31488+ (Hapterophycus canaliculatus Oshoro5f female) back to top