mRNA_H-canaliculatus_F_contig1003.67.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: D7G4Z4_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z4_ECTSI) HSP 1 Score: 374 bits (959), Expect = 1.110e-119 Identity = 189/210 (90.00%), Postives = 197/210 (93.81%), Query Frame = 2 Query: 488 GGVRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAVF 1117
GGVRGLKAVA ESTDV+SP+ G EDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLT+NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LT+ P +++P A+F
Sbjct: 35 GGVRGLKAVAAAESTDVISPQ--GEEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD----GPPTIVPPAMF 238
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE) HSP 1 Score: 367 bits (943), Expect = 2.220e-111 Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 2 Query: 488 GGVRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
GGVRGLKA+A ESTDV+SP+ G EDKMGEYIK+RGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLT+NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LT+
Sbjct: 35 GGVRGLKAIAAAESTDVISPQ--GEEDKMGEYIKSRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD 227
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A7S2B655_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B655_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.520e-85 Identity = 132/176 (75.00%), Postives = 146/176 (82.95%), Query Frame = 2 Query: 518 MTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 1045
M+ +T G D + EY++ GG+ PIRK+LIANNGMA TK+ILSMR+W Y ELGDE AV+FVAMATPEDL ANAEFI+LADA VEVP GKNSNNYANVD+IVD A + VDAVWPGWGHASENP+LPT LTE GIKFIGPTAPVMSVLGDKIAANILAQTA VPSIPWSG
Sbjct: 80 MSLATPASPTTSAGSTDALEEYVQKHGGNRPIRKVLIANNGMAATKSILSMRKWAYFELGDENAVQFVAMATPEDLKANAEFIKLADAYVEVPAGKNSNNYANVDIIVDVAKEYNVDAVWPGWGHASENPKLPTALTELGIKFIGPTAPVMSVLGDKIAANILAQTANVPSIPWSG 255
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA) HSP 1 Score: 286 bits (732), Expect = 4.080e-83 Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 2 Query: 566 DKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
D M Y++ GGSLPIRKILIANNGMA TKAILSMRQWCYLELGDEKA+EFV MATP+DL ANAEFIRL+D I EVPGG N NNYANVDLIV+ A ++ VDAVWPGWGHASENP LP RL+++GIKFIGPT+PVM+VLGDKIAANILAQTAKVPSIPWSGDGL A LT+
Sbjct: 14 DAMAAYVEKHGGSLPIRKILIANNGMAATKAILSMRQWCYLELGDEKAIEFVVMATPDDLAANAEFIRLSDGIAEVPGGSNRNNYANVDLIVELAKRENVDAVWPGWGHASENPALPRRLSDDGIKFIGPTSPVMAVLGDKIAANILAQTAKVPSIPWSGDGLTADLTD 182
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA) HSP 1 Score: 286 bits (731), Expect = 5.560e-83 Identity = 140/196 (71.43%), Postives = 159/196 (81.12%), Query Frame = 2 Query: 527 STDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAV 1114
S + P + D + +Y++ GGSLPIRK+LIANNGMA TK+ILSMRQW Y+ELGDEKA+EFVAMATPEDL ANAEFI+LAD+ VEVP GKNSNNYA+VD+IV A+ +GVDAVWPGWGHASENP LP L NGIKFIGPT+ VMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT+ R + A V
Sbjct: 53 SATISPPSEVAVTDNLSKYVEEHGGSLPIRKVLIANNGMAATKSILSMRQWAYMELGDEKAIEFVAMATPEDLKANAEFIKLADSFVEVPAGKNSNNYASVDVIVKIAVDKGVDAVWPGWGHASENPLLPETLLANGIKFIGPTSSVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTDDGRIPEETFNKAMV 248
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A813EQ02_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EQ02_POLGL) HSP 1 Score: 263 bits (671), Expect = 3.650e-82 Identity = 135/193 (69.95%), Postives = 148/193 (76.68%), Query Frame = 2 Query: 494 VRGLKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTE 1072
V A A E D V K + K+ EY+ ++GG+ +RKILIANNGMA TKAILSMRQW YLELG + EFVAMAT EDL ANAEFIRLAD +EVP GKN NNYANVDLI + A QGVDAVWPGWGHASENP+LPT+L GI FIGPTAPVMSVLGDK+AANILAQTA VPSIPWSGDGL A L E
Sbjct: 107 VTACSATATLEKGDAVVTKADAAK-KLEEYVFSKGGNKVLRKILIANNGMAATKAILSMRQWAYLELGLDNVFEFVAMATREDLEANAEFIRLADTFIEVPAGKNVNNYANVDLICEIAKSQGVDAVWPGWGHASENPKLPTKLKSMGITFIGPTAPVMSVLGDKVAANILAQTAGVPSIPWSGDGLVAELNE 298
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA) HSP 1 Score: 280 bits (716), Expect = 5.650e-81 Identity = 136/185 (73.51%), Postives = 154/185 (83.24%), Query Frame = 2 Query: 515 AMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT 1069
A T + +SP+ +D + Y+K+RGG+L IRK+LIANNGMA TK+ILSMRQW Y+ELGD++A+EFV MATPEDL ANAEFIRLAD VEVPGG N NNYANVDLIV A ++GVDAVWPGWGHASENP+LP L + GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT
Sbjct: 87 AATMAPPALSPEAQKKKDAVAAYVKSRGGNLAIRKVLIANNGMAATKSILSMRQWAYMELGDDRAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQMAQREGVDAVWPGWGHASENPRLPNTLKQLGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 271
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC) HSP 1 Score: 279 bits (713), Expect = 1.420e-80 Identity = 138/189 (73.02%), Postives = 154/189 (81.48%), Query Frame = 2 Query: 503 LKAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLT 1069
L A M + +SP +D + Y+K+RGG+L IRK+LIANNGMA TK+ILS+RQW Y+ELGD+KA+EFV MATPEDL ANAEFIRLAD VEVPGG N NNYANVDLIV A ++GVDAVWPGWGHASENP+LP L E GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT
Sbjct: 87 LSAATMAPPS-TLSPAAQKKKDAVAAYVKSRGGNLGIRKVLIANNGMAATKSILSIRQWAYMELGDDKAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQVAEREGVDAVWPGWGHASENPRLPNTLKEMGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 274
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: K8EIK1_9CHLO (Acetyl-CoA carboxylase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIK1_9CHLO) HSP 1 Score: 277 bits (709), Expect = 4.870e-80 Identity = 137/204 (67.16%), Postives = 157/204 (76.96%), Query Frame = 2 Query: 506 KAVAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTEVRRFRPHSLLPAAVF 1117
KAV E + + S D K+ EY+ N+GG IRK+L+ANNGMA TKAILSMR+W Y ELGDE A++FV MATPED+ ANAEFIR AD +EVPGGKN NNYANVDLI + A+++GVD VWPGWGHASENP+LPT L +NGI+FIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LT P +P F
Sbjct: 70 KAVREPEQSSMASASD-----KLAEYVANKGGKRVIRKVLVANNGMAATKAILSMRRWAYNELGDENAIKFVVMATPEDIGANAEFIRYADDFIEVPGGKNVNNYANVDLITEIAVREGVDGVWPGWGHASENPKLPTALKKNGIQFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLVANLT------PEGTIPQETF 262
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Match: A0A1E7FNT7_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNT7_9STRA) HSP 1 Score: 277 bits (708), Expect = 6.590e-80 Identity = 133/178 (74.72%), Postives = 153/178 (85.96%), Query Frame = 2 Query: 512 VAMTESTDVVSPKDGGGEDKMGEYIKNRGGSLPIRKILIANNGMAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTENGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 1045
++ E++DV + ED Y+K RGG+L I+K+LIANNGMA TK+I+SMRQW Y+ELGDEKA+EFVAMA+PED+ ANAEF+RLAD+ VEVPGG N NNYANVDLIV A++QGVDAVWPGWGHASENPQLPT L +NGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG
Sbjct: 53 LSTLEASDVTTSVTTSVED----YVKGRGGNLAIKKVLIANNGMAATKSIMSMRQWAYMELGDEKAIEFVAMASPEDINANAEFVRLADSYVEVPGGSNKNNYANVDLIVKLAVEQGVDAVWPGWGHASENPQLPTNLAKNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1003.67.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1003.67.1 >prot_H-canaliculatus_F_contig1003.67.1 ID=prot_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=291bp MHKRRHGGGAFAAFLISRLVGNGSAFVPSALTPKGAGSVGGGGGGNAIQSback to top mRNA from alignment at H-canaliculatus_F_contig1003:25269..31488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1003.67.1 ID=mRNA_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6220bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:25269..31488+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1003:25269..31488+ >mRNA_H-canaliculatus_F_contig1003.67.1 ID=mRNA_H-canaliculatus_F_contig1003.67.1|Name=mRNA_H-canaliculatus_F_contig1003.67.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1746bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:25269..31488+ (Hapterophycus canaliculatus Oshoro5f female)back to top |