Homology
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
D7G4Z5_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Z5_ECTSI)
HSP 1 Score: 186 bits (471), Expect = 1.220e-59
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFE KYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG
Sbjct: 1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A835YST4_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST4_9STRA)
HSP 1 Score: 145 bits (367), Expect = 8.980e-44
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 1 MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
ME+SG S+ +VSDMDDH EMR DAQ WAAAAIES ++EK IS+ IK + + KYGPTWHCIVGTDFKA+VTHE+K F+FFYHGKMA CLYKAG
Sbjct: 1 MENSGASSSVVSDMDDHSEMRTDAQAWAAAAIESHAEEKAISKDIKGRMDDKYGPTWHCIVGTDFKAYVTHETKTFMFFYHGKMAICLYKAG 92
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A7S2V5R3_9STRA (Dynein light chain (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5R3_9STRA)
HSP 1 Score: 136 bits (342), Expect = 1.890e-39
Identity = 66/93 (70.97%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 1 MESSGVS-AKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
MES G K+V DMD+HGEM+ DA+N AAAA+E +EK+ISR IK+ F+QKYGPTWHCIVGTDF+AFVTHESKHF+FFY GK+A CLYKAG
Sbjct: 39 MESRGSGEGKLVCDMDEHGEMKNDAKNVAAAAVEQHQEEKDISRHIKAHFDQKYGPTWHCIVGTDFRAFVTHESKHFIFFYIGKIAICLYKAG 131
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A7S2CIH5_9STRA (Dynein light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIH5_9STRA)
HSP 1 Score: 125 bits (313), Expect = 3.130e-35
Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 19 SAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
S+K+V DMD+HGEM+ DA A AIE ++EK IS +IKS F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKAG
Sbjct: 31 SSKIVCDMDEHGEMKADAHTVAGEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKAG 116
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A7S0SUZ6_9STRA (Dynein light chain n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUZ6_9STRA)
HSP 1 Score: 121 bits (304), Expect = 4.700e-34
Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 7 SSGVSAKMVSDMDDHG---EMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 273
SSG +KMV DM+DHG EM+ DA + A+ A+E+ +EK+ISR IKS F+QKYGPTWHCIVG+DF+AFVT+ESKHF+FFY GK A CLYK
Sbjct: 10 SSGPHSKMVCDMEDHGIHGEMKNDALSVASTALEANQEEKDISRHIKSFFDQKYGPTWHCIVGSDFRAFVTYESKHFIFFYIGKTAICLYKT 101
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
F0XW00_AURAN (Dynein light chain (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW00_AURAN)
HSP 1 Score: 111 bits (277), Expect = 3.140e-30
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 43 DDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
D+HGEM+ + N AA AIE E E+S+ IK+ F+QKYGPTWHCIVG+DF+A+VTHESK+F+FFY GK A CLYK G
Sbjct: 1 DEHGEMKQEVYNLAAYAIEQYVTEMEVSKHIKAHFDQKYGPTWHCIVGSDFRAYVTHESKNFIFFYQGKTAICLYKCG 78
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A482SJR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR4_9ARCH)
HSP 1 Score: 107 bits (267), Expect = 8.890e-29
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 58 MRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 273
M+ DA AAA+E+ ++EK+IS+ +K+ F+QKYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKA
Sbjct: 1 MKHDAFTVVAAALETNTEEKDISKHVKTYFDQKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 72
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A8J2SHI5_9STRA ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI5_9STRA)
HSP 1 Score: 108 bits (269), Expect = 4.500e-26
Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 40 MDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
+D+HGEM+ +A N AA A+E E EIS+ IK++F++KYGPTWHCIVG+DFK THE+KHF+FFYHGK A LYK G
Sbjct: 300 VDEHGEMKQEAYNLAAYAVEQFVTEMEISKHIKAQFDEKYGPTWHCIVGSDFKLQCTHEAKHFIFFYHGKTAVALYKCG 378
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A7S1YV50_9STRA (Dynein light chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV50_9STRA)
HSP 1 Score: 100 bits (248), Expect = 2.620e-25
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 25 KMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
K + DMD+H EM+ DA + A AIES EK+ + IK F+ KYGPTWH IVG+DFKA+ THE+K F FFY GK A C+YKAG
Sbjct: 36 KQICDMDEHSEMKSDAISVATNAIESHIQEKDQANHIKRAFDAKYGPTWHVIVGSDFKAYGTHEAKTFFFFYVGKAAICMYKAG 119
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Match:
A0A0R3UCN8_MESCO (Dynein light chain n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UCN8_MESCO)
HSP 1 Score: 94.4 bits (233), Expect = 3.090e-23
Identity = 48/91 (52.75%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 13 GVSAKMV---SDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEQKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 276
G S K V +DM D EM+ DA + A+ A+++++ EK+I+ AIK KF+ KYGPTWHCIVG +F ++VTHESKHF++FY G++A L+K+G
Sbjct: 14 GQSQKAVVKNADMSD--EMQHDAVDCASEAMQNQTIEKDIAAAIKKKFDSKYGPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKSG 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1003.66.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.22e-59 / Id = 98.91 Expect = 8.98e-44 / Id = 73.91 Expect = 1.89e-39 / Id = 70.97 Expect = 3.13e-35 / Id = 68.60 Expect = 4.70e-34 / Id = 65.22 Expect = 3.14e-30 / Id = 64.10 Expect = 8.89e-29 / Id = 66.67 Expect = 4.50e-26 / Id = 62.03 Expect = 2.62e-25 / Id = 58.33 Expect = 3.09e-23 / Id = 52.75 Sequence D7G4Z5_ECTSI A0A835YST4_9STRA A0A7S2V5R3_9STRA A0A7S2CIH5_9STRA A0A7S0SUZ6_9STRA F0XW00_AURAN A0A482SJR4_9ARCH A0A8J2SHI5_9STRA A0A7S1YV50_9STRA A0A0R3UCN8_MESCO Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1003.66.1
>prot_H-canaliculatus_F_contig1003.66.1 ID=prot_H-canaliculatus_F_contig1003.66.1|Name=mRNA_H-canaliculatus_F_contig1003.66.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=93bp
MESSGVSAKMVSDMDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFE back to top mRNA from alignment at H-canaliculatus_F_contig1003:19198..23717+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1003.66.1 ID=mRNA_H-canaliculatus_F_contig1003.66.1|Name=mRNA_H-canaliculatus_F_contig1003.66.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4520bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:19198..23717+ (Hapterophycus canaliculatus Oshoro5f female)ATGGAGAGCTCCGGTGTCTCGGCGAAAATGGTGTCTGATA GTAAGTGACT
GCCAAACGTTTCAAATGGGGATCCATCGTTGTATCTAATCCCCAGTCTTG
TCCACCCAATTTCAAACAAGTTCAAACGAACCTCCCTTCCATGGCACGTG
ATGTGATCCGGTAAGCCTGAGCTACCGTACCCAGGTTTATGCGCAGCGTC
AAAATCTATGCCCTGCACGCATCTTGTGCCGTCCATTTGGGGGAGTTGAA
AGGAAAATAGTCAACAACACGAAACAAATACCCTCTCAGGTATGTCTCAG
CGAGCGTCTCAAGGGCTAACTGTAATTTAGAGTTCTTTCCATAGTCTATA
TCAGTGAATGGTTTCTGCGTGAAACATCAACTGAGGTACAAGTAAAAGGC
CCGTGAGACTCGTATATTTTCGCAATATTTTACCACGCCTGTAGAAAACT
CTTGGTGCTCCTTGCTTCATCGTGGACAAATCTGTAAACGGTGATGGATG
GCGTGCAGTGCATAGATCATAGGCAGCGCTGCACCGATGGCCGCATCCGA
CTGTTGCCGCGTACGGGATACGTTCACTCTTCCAGTTGGCTTGGGAAGCA
CAACACATAATTAAGCAATCCCCTGGCCTCTCGGACGACTCCTTGTGGCA
CACGGTGCACATGATATATCAGCCCCAATTTTTTTGATATTCATACAACG
ATCTCTTGATATATCATACGGCATCATCATCGTATCATATCACACGACAC
GTGATATTTATATTTGATATGATACCGCGCCTTTTCTTCCTGTTCTTCAA
GTATCGATTTGATATATGAGAAACACAAAGAGTTTTCGCGGAGAAGAACA
AACACTGCTGTGTGGCGGCCAAGACGACATGCACACCACACAACACACAT
CACATTACTAGTTCTGGGTCTGCTCTAGGCGCAAATGTCCCATTTCGCTA
GGCGAATGCTGGCTGTCGCGGTCGCGGCAGACCACCACCAGCTGGCAACG
TCGTCACAGTGAAACGCGCCAGGCTCTCCGACAACAACGTAGAGACCCTC
GTTTACCTGCACTCTAACCAATGGATGTGATAGTTTTTGTATCAAGGCGA
GCGGGCGCCTAGCCAATGTCTTCGTGTGGCGGGGGGGAAGCGGTGGTGGG
GCCCGGACGTAGGGGGTCTTATGGCAGTATTCATGAATCAGGAAAGCAGA
GGTGGACTACGAGGGTGTGCCACTATTGTTGTAGTACGAACAGAGGTTTC
ACAAAACAAGTCAACAACACCGAAGGAACACCCACCTGAGACACTGTCCA
TCTCAAGGGGCTTTTGTTTATTCCATTCAGTGAGGGTTCCATTCGAGTGA
CAGGATGAAGCTATGTAGCAGTAGGCAAGTTGCCGACAAAAACGTGGACA
TTTGTGGACAAAGACGTTAAAAACGTGGTATGGGGGATGGACAAACACCG
AAAGGTGGCTTTTGGGGGATGAATGGGATGGGGAAGAGAACAGCAACATA
TACACCACGAGAACTTTGATACTTCCTGTGATGATTGGCCGTGTGAGAGA
ATTCGTTGTCCAGAAGCTTGGTGATCCATCGTTGTTGTACCCGGAAAAGG
CGTACCTTTTGAAATTGTGTGTGGGGAGGCTGCCAGGATTTTGTATTGTT
GCCGTTTTTGATTTGGTGATATGTGAGCAGCTCCACCCAGACAGAAATTC
TTGTACATAATTTTTATGTGTCGCGTACTTGGTCAAGATGTCAAGATACT
GCTCTGGGGGGTCTGTGGGGAAACAATATAGATGGTCGGATCATCTTTGT
GTGGCGGGGCTCCTACGCCCTCTAAGGCAGGCCCATTTGCCACCGTATTT
GAATGAATGAAACGAGTCAAATCCTTCCTGCAGAAGCACTACGCACGCGC
GCGGTGTGACCAGACGTGACCCACTCAAGTTAATCGAGCCTGCGCTATCA
TACAGCAATAACCCGTACCTTATTCTGAGAGAGCGTGCGGCAGCCCACGC
CGCCCACAAATTATGTGATAGGGACACACGCGACGCGTCGATCACACAAG
TGAGGGTCAAGTAAAGTATCGCGCCAGCATCTCTCCGTGGACGGGCGAAT
GTTGACCTTCTCTAGAACACAGCGTCACCGCGGTAGAAGCGTCGCGGCAC
ACTTGCAAGTGCTTTATCTTAGCTTTCTTTGTGTATCATCTCATATCATA
TCACGTGATGTATCACATGATATTTCGTATCACATGATTTTTCAAATCAA
GATATGAAGAAATACATGACAGGAATGTATCGCGAATATATCACGTGATA
TTTCACGCAATTTGATATTGATACCCATCACTAACATGAGTCGCTCGGCC
CCGGAAGAGGTGAATGAGTCTTTCGACGAAGCTACGTTGCGGCCTTACAG
TAGTCTACGGCGATACCCCAGGAAAAAGACTAGTGGCAGCAATACTGCTT
GTTTTCTCAAAATGCGCGAGTGGCCTGTCAGCTCAGCGCTAAAGCAGGCG
ATGGAGTTAACTTCGATTATTAACGAATTCTCGACCATATCTGAGACTCG
AAACATTACAGCATCGAGTTAGAGGACTTAGTCTGGTTTCACCTGGAGGG
CGACGGCGTAGCAGCGGGGAGACTGAGTACTCTCATTTCTTGTTTTTGTT
GAAACATAACTTGATGGTTGACCGGAGCTTCATTCCCCATTCAAGTGCAA
GAGTCGCGCGAAACATCTACATGTAATCCCACCACTGCTATGTCAACGTG
CACAAATTTTCGAAACCTGCTGAGCCGGCTCTCCTTGACCTGTGCATGTG
CACTCTTGAGGTATCCCAAACATTCACGGTGCGTGACCGGAGAGTCCTTC
TCGACAACTTCAAAACGACACACCCCTTGTCGGCGCACATCGGCGCTTTC
TTTCCTGGTGCGCGAGCGTACCGAAAACGAAATAAGTCTGGGGTGTGCGT
GATAACACCAAACGCAATGCAATCAACCAGTGCCCAACGTCACCACAGTG
CATCGTATTGAAGGCGGTTTCGGGTGTCCACTGCTGTCTTGAAGAGCGGA
AAGGGCGGCAGCACTAATAATGTGGCACAAATCCACACAGTCAAGAGCCT
ACCGAGATTATTTTTTCAGCTTTGACACGGAGTTTCTTGCCGACAAGTAG
GTGAAAAGCGCTGGGGGCGAAGACATGATGTGCTGTGATGTCTGCCGGGT
ACAAAATGATTTTGCTGCAAAGAGGCTCTCTCCGCGTACACGATGTAGCG
ACGTCCCGCTAGCTTTACTCGCAGGTCCTGCTTCTACCTCCATTGTCGCT
GATTTCCTACACAAATTCATACCGAAGCATGCACTCGAATTCACAGTGGA
TGACCACGGCGAGATGCGAGTTGACGCGCAGAACTGGGCAGCAGCAGCAA
TAGAGAGCAAAAGCGACGAGAAGGAGATATCAAGAGCAATAAAG GTAGGT
GCGTTACCATAATAACAAATCTCTAGCGTCTCGGAGTAAAGCGGAAAGTG
GTTGGTGGTTACGAAGAATGAAAAGTAGTTTTCAGGAGTCCCCTGAGCAG
TACGTATACTTGTATATCGGTGTGGACACCAACCGCTGACGTCTTGTAAC
TATGGTTAACAACAATTCGCAAGTAGGAGAGGGAAATTTGTTTCCACCTA
CCTTCCCTTAGGTTTTCGGCAAAGACTCGAAGATGCAAGGAGCGGAAGCG
GTGGAGGTTTTTTTCGTTGCGACCGTGAAGCGAGGACACGTCGGCTCACA
CTACATGTTTCGTGTGGAAGCATCCCGGACCGTACGTTTCCGCATCGCTG
CTCGAGGCGATGCCCCGAGTGTGGAGCACTCTCAGGCCAAGTGTTCATAT
CTTTATCGCGAACCAGAACAAGGATATGCATGTACCATACAAACGGCGAC
TATTAAACCAGAACTTCAGTCTATACGTGTTGGGGTATAAAGGGTGTCTA
ACTATTCCCCTTACCAATCCCTCCCGCGTCCACCCATGCGAAGCTTGACC
ATCTCTCCCTCCGCTGTTCCCCTCTATTCCCACGCCCCATAAGCGCATGG
TAAGCTTTCGCGACCAACGGGATTTCATCATATTCTTCGACATCGCCCAC
ATATGTTTTAGACACCGAGACTAGGAACGATTGAGCAAGGTTGTGTTCTG
TGTGCGCGTAGAAGGGCAGCACCATGTACGAAGTGCTTGATAAGAACCGA
AGTTATGACAGGCTAAGCTCCTTCCTGCCACTTCAGACTCCCAATGTCGA
CACACCGACAGAAGCATTCCCAACCTTCAATACTTCGGAGTGTTGAGCAC
CTTCTCGCTTACCCTTAATACACGTTTTTCTATGTGCGCCGCTTCCTCTG
TTCGACTTGACCTGACTGCTTACTCGCAGTCGAAGTTCGAGCAAAAATAC
GGTCCCACATGGCACTGCATCGTTGGGACGGATTTTAAGGCTTTCGTGAC
GCACGAGAGCAAGCACTTCGTCTTTTTCTACCATGGGAAGATGGCATTCT
GTCTATACAAAGCAGGATGA back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1003:19198..23717+
>mRNA_H-canaliculatus_F_contig1003.66.1 ID=mRNA_H-canaliculatus_F_contig1003.66.1|Name=mRNA_H-canaliculatus_F_contig1003.66.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=558bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1003:19198..23717+ (Hapterophycus canaliculatus Oshoro5f female) back to top