Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 451 |
| Cds size | 327 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928631.322505-UTR-H-canaliculatus_F_contig10027:3760..3882 | 1622928631.322505-UTR-H-canaliculatus_F_contig10027:3760..3882 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10027 3761..3882 - |
| 1696845503.2504754-UTR-H-canaliculatus_F_contig10027:3760..3882 | 1696845503.2504754-UTR-H-canaliculatus_F_contig10027:3760..3882 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10027 3761..3882 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928631.3454354-CDS-H-canaliculatus_F_contig10027:3882..4153 | 1622928631.3454354-CDS-H-canaliculatus_F_contig10027:3882..4153 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 3883..4153 - |
| 1696845503.2590764-CDS-H-canaliculatus_F_contig10027:3882..4153 | 1696845503.2590764-CDS-H-canaliculatus_F_contig10027:3882..4153 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 3883..4153 - |
| 1622928631.3558185-CDS-H-canaliculatus_F_contig10027:4331..4387 | 1622928631.3558185-CDS-H-canaliculatus_F_contig10027:4331..4387 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 4332..4387 - |
| 1696845503.2675476-CDS-H-canaliculatus_F_contig10027:4331..4387 | 1696845503.2675476-CDS-H-canaliculatus_F_contig10027:4331..4387 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10027 4332..4387 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10027.63.1 >prot_H-canaliculatus_F_contig10027.63.1 ID=prot_H-canaliculatus_F_contig10027.63.1|Name=mRNA_H-canaliculatus_F_contig10027.63.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=109bp
KPRCRSRACSRAPRGCGRRRVSERACSTSGWDNLNGGWLDKHQVLPYHGT
LDGGREKRVRVLGKRGMQKARCRSHGLSHCQLTVYTRAGTAVMSATAATP
SRLNLVQK* back to topmRNA from alignment at H-canaliculatus_F_contig10027:3761..4387- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10027.63.1 ID=mRNA_H-canaliculatus_F_contig10027.63.1|Name=mRNA_H-canaliculatus_F_contig10027.63.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=627bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10027:3761..4387- (Hapterophycus canaliculatus Oshoro5f female)
AAGCCACGGTGCCGATCGAGGGCATGCAGCCGGGCACCTCGGGGCTGCGG
AAGAAGGTGGGTTTGGTGTTTGTTTTTGAGGTACACGGCATTGCTGTGTT
TCGTGTATCGGTCGGTGCCATCTTTGTTTTGGATGAGCCTTTCCGTCCAA
CGCGATTCACGCCTCTCTTAGTCGGAGTTGTTCTTATGTACGTTTTCCGT
TCCGACCCTCTTCCGCTCAAAATACGAATCGGAGACGGGTATCGGAGCGC
GCTTGCTCCACCTCTGGGTGGGACAATTTGAATGGTGGATGGCTTGACAA
GCATCAGGTGCTGCCGTACCATGGCACACTTGACGGGGGGAGAGAAAAGC
GGGTACGCGTCCTTGGGAAGAGAGGCATGCAGAAGGCAAGATGCAGGAGC
CATGGGCTCAGCCATTGCCAGTTAACAGTTTACACGAGGGCCGGGACCGC
GGTCATGTCAGCCACCGCCGCAACCCCTTCAAGGTTAAACTTGGTACAAA
AATGAGCGGAGTCAAACGCACACGAATTCGCGGGGGAATCATGACGAAAA
CGTTGCCAGCTTGAGTGCTCGGCATCCATCTTGTGTACACCACACACGGC
ACGCACGGCGCAGTTGCCGTTTCACAC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10027:3761..4387- >mRNA_H-canaliculatus_F_contig10027.63.1 ID=mRNA_H-canaliculatus_F_contig10027.63.1|Name=mRNA_H-canaliculatus_F_contig10027.63.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10027:3761..4387- (Hapterophycus canaliculatus Oshoro5f female)
AAGCCACGGTGCCGATCGAGGGCATGCAGCCGGGCACCTCGGGGCTGCGG
AAGAAGAAGCCACGGTGCCGATCGAGGGCATGCAGCCGGGCACCTCGGGG
CTGCGGAAGAAGACGGGTATCGGAGCGCGCTTGCTCCACCTCTGGGTGGG
ACAATTTGAATGGTGGATGGCTTGACAAGCATCAGGTGCTGCCGTACCAT
GGCACACTTGACGGGGGGAGAGAAAAGCGGGTACGCGTCCTTGGGAAGAG
AGGCATGCAGAAGGCAAGATGCAGGAGCCATGGGCTCAGCCATTGCCAGT
TAACAGTTTACACGAGGGCCGGGACCGCGGTCATGTCAGCCACCGCCGCA
ACCCCTTCAAGGTTAAACTTGGTACAAAAATGAACGGGTATCGGAGCGCG
CTTGCTCCACCTCTGGGTGGGACAATTTGAATGGTGGATGGCTTGACAAG
CATCAGGTGCTGCCGTACCATGGCACACTTGACGGGGGGAGAGAAAAGCG
GGTACGCGTCCTTGGGAAGAGAGGCATGCAGAAGGCAAGATGCAGGAGCC
ATGGGCTCAGCCATTGCCAGTTAACAGTTTACACGAGGGCCGGGACCGCG
GTCATGTCAGCCACCGCCGCAACCCCTTCAAGGTTAAACTTGGTACAAAA
ATGA back to top
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