Homology
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
D7FQ38_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ38_ECTSI)
HSP 1 Score: 207 bits (527), Expect = 5.810e-67
Identity = 100/104 (96.15%), Postives = 104/104 (100.00%), Query Frame = 1
Query: 145 MADDEQAATEAQESVTERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 456
MADDEQAA+EAQESVTERKIE+LIAEIPE+LQQKAKRRVCLAMDKY+IEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE
Sbjct: 1 MADDEQAASEAQESVTERKIEVLIAEIPEELQQKAKRRVCLAMDKYDIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 104
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A7S2UW34_9STRA (Dynein light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW34_9STRA)
HSP 1 Score: 103 bits (258), Expect = 4.730e-26
Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 196 RKIEILIAEIPE----DLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 456
RK+ IL AE PE DLQ+ A R+V ++ K+ I KD+AT+VK+HFDE+ G+WHCV GR+FGCSVT+ET++L FFK +Q FVLLF S E
Sbjct: 15 RKVVILRAEFPEVKGEDLQEDAIRKVDESLTKHTISKDVATEVKRHFDEKYGGTWHCVVGRNFGCSVTNETRYLLFFKIEQTFVLLFKSQE 105
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A7S2RLM3_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLM3_9STRA)
HSP 1 Score: 103 bits (256), Expect = 1.160e-25
Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 220 EIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 456
+IPE++ +KA + AMD++ IEKDIAT +K FD++ G+WHCV+GRSFGCSVTHETK+L FF+ DQ +VLLFCS E
Sbjct: 20 DIPEEMCRKAIGKANEAMDQHTIEKDIATAIKTSFDKDYGGTWHCVAGRSFGCSVTHETKYLVFFQLDQTYVLLFCSDE 98
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A7S1U8R4_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8R4_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 8.360e-23
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 193 ERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQM 429
ER + +L AE+PEDL+ KA A+D +E+EKD+A VKK FDE G+WHCV GR+FGCS+THETK+L FFK DQ+
Sbjct: 10 ERVLRVLKAEMPEDLKTKAAEVGNQALDAHEVEKDVAQFVKKAFDEASPGTWHCVVGRNFGCSITHETKYLIFFKLDQV 88
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A835YLR1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR1_9STRA)
HSP 1 Score: 94.0 bits (232), Expect = 2.500e-22
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 220 EIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFK 417
+IPE LQ+KA RV + + + KDIA+D+KKHFD+EC G+WHCV GRSFGCSVTHETK+L FF+
Sbjct: 10 DIPEALQKKAIERVVEVLQRVAVAKDIASDMKKHFDQECGGTWHCVVGRSFGCSVTHETKYLLFFR 75
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A7S2CC43_9STRA (Dynein light chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CC43_9STRA)
HSP 1 Score: 93.6 bits (231), Expect = 8.150e-22
Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 145 MADDEQAATEAQESVTERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 450
MADD ++ V+ RK+ + P ++ + A ++ A+DK+ IEKD+AT VK FD++ G+WHC+ G+SFGCS+THETK+L + + D +F LLFCS
Sbjct: 1 MADDSDEEEVGKKKVSTRKVHLHQVLAPNNMCELAVEKLDEAIDKHTIEKDMATAVKTTFDKDYGGTWHCIVGKSFGCSITHETKYLMYIQVDHLFCLLFCS 102
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
H3BFR6_LATCH (Dynein light chain n=6 Tax=Eukaryota TaxID=2759 RepID=H3BFR6_LATCH)
HSP 1 Score: 89.4 bits (220), Expect = 3.410e-20
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 178 QESVTERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 450
Q +++ERK I A++PED+QQ A A++KY IEKDIA +KK FD++ +WHC+ GR+FG VTHETKH +F Q+ +LLF S
Sbjct: 24 QANMSERKAVIKNADMPEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 114
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A448WG77_9PLAT (Dynein light chain n=2 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A448WG77_9PLAT)
HSP 1 Score: 88.2 bits (217), Expect = 4.990e-20
Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 196 RKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 450
RK I A++PED+Q +A R AMDKY IEKDIA +KK FD+ +WHC+ GR+FG VTHETKH +F Q+ VLLF S
Sbjct: 6 RKAVIKNADMPEDMQAEAVRCCADAMDKYNIEKDIAAYLKKEFDKRYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKS 90
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
UPI001B88DF89 (dynein light chain 2, cytoplasmic-like isoform X2 n=3 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DF89)
HSP 1 Score: 89.0 bits (219), Expect = 7.600e-20
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 184 SVTERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 450
++TERK + A++ ED+QQ+A AM+KY IEKDIA +KK FD++ +WHCV GR+FG VTHETKH +F Q+ VLLF S
Sbjct: 43 NMTERKAVVKNADMNEDMQQEAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCVVGRNFGSYVTHETKHFIYFYLGQVAVLLFKS 131
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Match:
A0A7J6CV12_9TELE (Dynein light chain n=2 Tax=Cyprinoidei TaxID=30727 RepID=A0A7J6CV12_9TELE)
HSP 1 Score: 89.0 bits (219), Expect = 8.670e-20
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 157 EQAATEAQESVTERKIEILIAEIPEDLQQKAKRRVCLAMDKYEIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 450
+Q TE + S+++RK I A++ E++QQ A A++KY IEKDIA +KK FD++ +WHC+ GR+FG VTHETKH +F Q+ +LLF S
Sbjct: 39 QQICTEIRSSMSDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig100.27.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 5.81e-67 / Id = 96.15 Expect = 4.73e-26 / Id = 58.24 Expect = 1.16e-25 / Id = 60.76 Expect = 8.36e-23 / Id = 58.23 Expect = 2.50e-22 / Id = 63.64 Expect = 8.15e-22 / Id = 44.12 Expect = 3.41e-20 / Id = 49.45 Expect = 4.99e-20 / Id = 54.12 Expect = 7.60e-20 / Id = 51.69 Expect = 8.67e-20 / Id = 45.92 Sequence D7FQ38_ECTSI A0A7S2UW34_9STRA A0A7S2RLM3_9STRA A0A7S1U8R4_9STRA A0A835YLR1_9STRA A0A7S2CC43_9STRA H3BFR6_LATCH A0A448WG77_9PLAT UPI001B88DF89 A0A7J6CV12_9TELE Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig100.27.1
>prot_H-canaliculatus_F_contig100.27.1 ID=prot_H-canaliculatus_F_contig100.27.1|Name=mRNA_H-canaliculatus_F_contig100.27.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=153bp
EFWRIEQSGGLREDTATRKWSKNTCAENIRDREAKRVRRLELTRYTQAMA back to top mRNA from alignment at H-canaliculatus_F_contig100:42833..44376+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig100.27.1 ID=mRNA_H-canaliculatus_F_contig100.27.1|Name=mRNA_H-canaliculatus_F_contig100.27.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1544bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:42833..44376+ (Hapterophycus canaliculatus Oshoro5f female)GAATTTTGGAGAATAGAGCAATCCGGTGGGCTACGGGAAGATACCGCGAC
GCGGAAATGGTCAAAGAACACCTGCGCGGAAAACATTAG GTGTGTACCCA
GTATCACTGTTTATGAGACTTGTTCGATTACATGGCCGTCGTCGTCGAAC
ATGCTGCCGATAGTCTGGCTTTGTCTGACGAGAGTCGATCTTGGAGTTTG
AAATCCATTCAGATAGGTGCACATTCGAGCCCGGCCGCAGATGTACTGCT
GTGTTTCATATCCGACACTGCTCAGCTCTACATAGATGCACAGCGTCAAC
GCTTTTCACGCAAGGTGCTTTAAGTTCAAGTTCACGTGGAGTACCAGGAC
AGGGTTGCAGGAGGGAGAGGTACGTGTCCCGGTCTATTCATCAAGAGCAT
TCAACATCGAAGAGTGACAACTCTCCATATTGCAGCGCATCACTTCCTGC
GCATGCATGCGCCCGTGGGTGGCTTAGAGTATGTGTATATGCCGTAGTCT
GCCAAGATAATTAAAACGTAAACGTGTACCAGGTGACTTGACAAACTACA
GCATGCGCACTGCAAATCCTTGTCTCTGGTCTTGAGCAGAGATCGTGAAG
CGAAACGAGTTCGGAGGTTGGAACTCACGCGGTATACTCAGGCTATGGCG
GACGATGAGCAGGCCGCCACAGAGGCACAGGAATCAGTAACGGAAAGAAA
G GTGAGGAGACATGCACATATATACGATGTTCTCGGCATACGAAGATGAT
GCGAACAAAACCCTTTTTTTCCTACGCCATAGCGGGTTGCCCAGCCGAGT
CGTTGCCTGTCCATGAACAGGCTTACCACCGATGCACCTGGTCTCGGTGA
GGAACACGGTATATGCGCCGTTTCTCCCTGCGATTATCTGAATAACAGAT
TGAGATACTGATCGCGGAAATCCCTGAAGATCTCCAGCAGAAAGCGAAGC
GGCGAGTGTGCCTGGCGATGGACAAATACGAGATCGAGAAAGACATTGCT
ACAGATGTCAAGAAACACTTCGACGAAGAGTGTGAAGGCTCCTGGCATTG
TGTG GTGAGTGTGTGCCACCGTGGATCTGATTTCTACATGCCCCGTAGAA
AGGAGCGGATAATTTCCACACCGCACGAGGACATACGGAGGACATGCCGA
TGAGGTAGACGAAGATTCCTGGCATGCGAGGCACGGGCGGAGTGCATACG
GCAAGTGCGGTGCAGCGCTCTCCTCGTGAAAGGCTGATGCATCACTCTGC
AATGATACGTGTATCTACAGAGCGTGCTTCTTTTCCGACAACCGTTGGCG
ACCAGGTCTGTCAAGGGAAAGCCTCGTTGGAAGTTTCATTACGTTTTTCC
AATCCATGTCCTTTCCCCTCTGTCCGTCCCTCTCGGCATTCTTCCCTTGT
TCGCCACCGCCGCCGAACATCGTGCGGTTCTTCCTCCGCAAGTCGGGACG
GAGTTTTGGGTGCTCCGTGACCCACGAGACTAAACACCTGTTCTTCTTCA
AGTGTGACCAGATGTTCGTGCTACTTTTTTGTTCCCCCGAGTGA back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig100:42833..44376+
>mRNA_H-canaliculatus_F_contig100.27.1 ID=mRNA_H-canaliculatus_F_contig100.27.1|Name=mRNA_H-canaliculatus_F_contig100.27.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:42833..44376+ (Hapterophycus canaliculatus Oshoro5f female) back to top