mRNA_H-canaliculatus_F_contig100.26.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI) HSP 1 Score: 368 bits (944), Expect = 6.280e-119 Identity = 178/210 (84.76%), Postives = 193/210 (91.90%), Query Frame = 3 Query: 417 LLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSL 1046
++RYLEMAYWTME+MGQ LPDAVAST+RWRE A PHL+TD+QVAEEA YGKMYVRG DR+ RPIIHYRPGLEKSFDTEKGLNLLF+TLERAK LPKGQTQFAV+ADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYV+I NAGGPI FVWKLIS VL+ERTK+KI F+SK+EAEA LTGLI PS LPASLPGGLD F+YSNEEYL L
Sbjct: 1 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEYLKL 210
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A6H5JFY3_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY3_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.530e-66 Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 3 Query: 642 DTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSL 1046
D +GLNLLF+TLERAK LPKGQTQFAV+ADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYV+I NAGGPI FVWKLIS VL+ERTK+KI F+SK+EAEA LTGLI PS LPASLPGGLD F+YSN+EYL L
Sbjct: 15 DILEGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNKEYLKL 149
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.830e-40 Identity = 112/336 (33.33%), Postives = 163/336 (48.51%), Query Frame = 3 Query: 150 PMATTREEDGTKRKRRALQALWRRVTEKLGGGSGSRYWEKRGRKVGGDGEAEPWKAIMLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALP---DAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKS-FDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLK-----------------------------------TAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYL 1040
P T E +KR R+ + + + KL G S G + G + K L +L+ +++ + L A+ V+HEL + LLR+LE++YW +E G A P D +A T+ WR+ G + V A GK+YVRG DR+GRP+IH+RP E + FD L+ YTLERA +P GQ++FAV+ DC+GF PP+ +K + M HYPMRLGYV I NAG + F WK+I+++L ERT KI F+ L + P LP ++ G D ++Y ++YL
Sbjct: 40 PAERTAAEPPSKRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDAR--PELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICG-TDTWTYDVDQYL 372
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI) HSP 1 Score: 157 bits (396), Expect = 8.700e-38 Identity = 82/241 (34.02%), Postives = 128/241 (53.11%), Query Frame = 3 Query: 321 MLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLS 1043
+L ELR ++ + G L RAK V HEL+ R+LE A+W +E G+ + D + +I WRE G + V ++ G + V+GHD RP++++RP L+ + + L+ Y LERA ++P+ Q+ ++ DC G G + PP+ +K F + HYPMRLG+V+ N G ++ WK++S +L RTK K+ + A + I PS L S GG + Y Y S
Sbjct: 175 VLQELRNEVAAKPG--LERRAKKVHHELDTVAFGRFLEAAFWALEHDGKRVSDFIEESIAWREKIGADRLRKEDVVDQGCRGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNSKLMIYNLERAIRLMPRNSWQYTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPST-ALGQTAKYIHPSQL-LSFAGGKSTWQYDPAVYFS 411
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.500e-36 Identity = 78/226 (34.51%), Postives = 119/226 (52.65%), Query Frame = 3 Query: 414 LLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAM-------------YGKMYVRGHDREGRPIIHYRPG--LEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTG-LISPSDLPASLPGGLDKFSYSNEEYLS 1043
+L+R++E A+W +E G + + T+ WRE G H +T + A G + V G DR+GRPI+H R G K + E+ L YT+ERA +G + ++ADC GFG + PPLP L+ F + RHYPMRLG++++ NA + W++ S ++ RTKDKI F RE + L ++P++LP +L GG + Y Y +
Sbjct: 1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFA--REGDRALVARYVAPAELPRAL-GGASAYEYDAARYFA 223
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A7S2XX21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX21_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.300e-34 Identity = 70/164 (42.68%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 525 LVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERA-KTMLPK-GQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLD 1010
+ D + EA GKMY G R G P++++RP LE D E L+LL YTLERA K+M K G +F VL DC+GFG S+ PP+ ++ F T+ +YPMRLG V + NAG P+ +WK++S +L+ERT+ K+FF+S++E + ++P L G L+
Sbjct: 8 MKVDAGMRREAAGGKMYTLGRGRSGEPLVYFRPALETGSDYEASLHLLVYTLERAIKSMDSKRGVEKFIVLVDCTGFGLSRAPPISLVTGQFKTLMHNYPMRLGKVFVVNAGTPMNMLWKIVSPILNERTRHKVFFLSEKEISQHIPQYVNPDVLEVEFGGKLE 171
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A1R1YNC8_9FUNG (CRAL-TRIO domain-containing protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YNC8_9FUNG) HSP 1 Score: 108 bits (270), Expect = 1.250e-21 Identity = 68/202 (33.66%), Postives = 103/202 (50.99%), Query Frame = 3 Query: 405 EDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVS----KREAEAKLTGLISPSDLPASLP 998
ED LL+++ ME + +A + T+ WR PH + ++ EAM GK Y+ G D+EGRP + +P L+ + + + + + +E A ++P G T+ +L D S S P + K+ +Q HYP LG +I NA ++ +KLIS +D TK KIFF S K + AKL S S LPA+ P
Sbjct: 89 EDKNLLKFIRARKHVMEDVMKA----IRKTLEWRISYRPHAINPDEIRTEAMPGKSYMNGFDKEGRPALILKPYLQNTKEPVSQIKYVVFNMELANKIMPVGVTKLIILIDLSHVVFSLIPSPKVSKSFLDVLQSHYPETLGRGIIINAPSIFLYTYKLISPFIDPVTKSKIFFASIAPSKTKQAAKLDRGSSASSLPATPP 286
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: K5WQZ5_PHACS (CRAL-TRIO domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WQZ5_PHACS) HSP 1 Score: 106 bits (264), Expect = 2.710e-21 Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 423 RYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLD 1010
RY+ A W +E + + T++WR P L+ +V E++ GK+ + G D++GRPII+ RPGLE + + + L L ++LERAK ++P GQ ++ D P + + + +Q+HY LG ++ N + F +K IS LD T+DK+ F LT LI L AS G +
Sbjct: 65 RYMRAAKWDLEDAKKR----IEGTMKWRREFKPDLIQPEEVRIESVTGKIVINGFDKDGRPIIYMRPGLENTERSPRQLRYLVWSLERAKDLMPPGQESLVIIVDYKSCSLRTNPSISVARQTLTILQQHYVETLGRAVVVNLPLILNFFYKGISPFLDPVTRDKMRF------NPDLTELIPKEQLDASFGGDFE 250
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A0C3EQ18_9AGAM (CRAL-TRIO domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3EQ18_9AGAM) HSP 1 Score: 104 bits (260), Expect = 5.850e-21 Identity = 76/248 (30.65%), Postives = 112/248 (45.16%), Query Frame = 3 Query: 330 ELRGQLE--EQYGHTLWTRAKAVRHELE------DGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSLL 1049
E Q+E QY HTL H+ E L RY+ A W M + + +TI WR P L+ +V E GK+ + G D++GRPII+ RPGLE + + L L + LERAK M+P GQ + D +P + + +Q+HY LG ++ N + F +K IS LD T++K+ F L +I PS L + GG +F + +E Y +
Sbjct: 26 EQSAQIEVLRQYVHTLVLPESDPYHKWELRWLNRPDTLPRYMRAAKWKMHDAQKR----IKATIEWRRDFKPDLIPPDEVKIECETGKIILNGFDKDGRPIIYMRPGLENTETGPRQLRHLVWWLERAKDMMPLGQESLVIFVDYKTATLRTSPSVSVAAKVLSILQQHYVETLGRAIVVNLPFILNFFFKGISPFLDPVTREKLCF------NPNLADVIPPSQLDSEF-GGEYEFEFDHESYWKQI 262
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A0C3S322_PHLGI (CRAL-TRIO domain-containing protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S322_PHLGI) HSP 1 Score: 102 bits (254), Expect = 5.100e-20 Identity = 76/274 (27.74%), Postives = 121/274 (44.16%), Query Frame = 3 Query: 291 DGEAEPWKAIMLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSLLQ*ADRKGYESVGSSVPRASKE 1112
D ++ KA++ L L E + W +R + + RY+ A W + + + T++WR P L+ +V E++ GK+ + G D++GRPII+ RPGLE + + + L L + LERAK ++P GQ ++ D P + + + + +Q+HY LG ++ N + F +K IS LD T+DK+ F LT L+ L A G F Y E Q G G+ V A E
Sbjct: 25 DSQSAKLKALLEHALSRALPESDPYRKWE----LRWLNKPDTIPRYMRAAKWDLVDGKKR----IEGTMQWRREFKPDLIPPEEVRIESLTGKIVINGFDKDGRPIIYMRPGLENTERSPRQLRHLVWCLERAKDLMPPGQESCVIVVDYKSCSLRTNPSISIARQTLVILQQHYVETLGRALVVNLPMILNFFYKGISPFLDPVTRDKMRF------NPDLTELVPKEQLDAVFGGD---FEYEFEPSSYWEQIVAACGIAEDGTRVEPAKPE 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig100.26.1 >prot_H-canaliculatus_F_contig100.26.1 ID=prot_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp MATTREEDGTKRKRRALQALWRRVTEKLGGGSGSRYWEKRGRKVGGDGEAback to top mRNA from alignment at H-canaliculatus_F_contig100:36742..41266+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig100.26.1 ID=mRNA_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4525bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:36742..41266+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig100:36742..41266+ >mRNA_H-canaliculatus_F_contig100.26.1 ID=mRNA_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1806bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:36742..41266+ (Hapterophycus canaliculatus Oshoro5f female)back to top |