prot_H-paniculata_contig19650.4999.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19650.4999.1
Unique Nameprot_H-paniculata_contig19650.4999.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
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BLAST of mRNA_H-paniculata_contig19650.4999.1 vs. uniprot
Match: D7FX92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX92_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.910e-17
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:    1 NVGEALVSFLQWMCAYDCLFRDPCKIANKLVATDAGTGEPLPPTLRS 47
            NVGEALVSFL WM  YD +F+DPC IANKLVATD+GTGEPLPPTLR+
Sbjct:  537 NVGEALVSFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRT 583
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BLAST of mRNA_H-paniculata_contig19650.4999.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 6.640e-17
Identity = 37/47 (78.72%), Postives = 41/47 (87.23%), Query Frame = 0 
Query:    1 NVGEALVSFLQWMCAYDCLFRDPCKIANKLVATDAGTGEPLPPTLRS 47
            NVGEAL SFL WM  YD +F+DPC IANKLVATD+GTGEPLPPTLR+
Sbjct: 1291 NVGEALASFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRT 1337
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19650.4999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX92_ECTSI1.910e-1780.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNQ0_9PHAE6.640e-1778.72KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021627Mediator complex, subunit Med27PFAMPF11571Med27coord: 4..46
e-value: 2.0E-7
score: 31.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19650contigH-paniculata_contig19650:4519..4659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19650.4999.1mRNA_H-paniculata_contig19650.4999.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19650 4519..4659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19650.4999.1 ID=prot_H-paniculata_contig19650.4999.1|Name=mRNA_H-paniculata_contig19650.4999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
NVGEALVSFLQWMCAYDCLFRDPCKIANKLVATDAGTGEPLPPTLRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021627Mediator_Med27