mRNA_H-paniculata_contig19646.4996.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: D8LQQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ6_ECTSI) HSP 1 Score: 212 bits (540), Expect = 5.780e-62 Identity = 105/119 (88.24%), Postives = 113/119 (94.96%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVATV 357
+VCSV SPFFLS ATN+LY GD+ ETMK VG+YA+LAF+AKALKEAQSLVYLKVKQQAY+EIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAI EC+ATV
Sbjct: 227 KVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILAFSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATV 345
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A835Z4N6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N6_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.280e-57 Identity = 96/119 (80.67%), Postives = 106/119 (89.08%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVATV 357
+ CSV SPFFLS ATNALY GD T + V +YALL+FTAK LKE QSL+YLKVKQQAY+EIAE +FAHLHTLSLQWHLKKKMGNV+RSMDRGT+AANNL+TYLFLYLVPAIGECVATV
Sbjct: 116 KACSVTSPFFLSDATNALYNGDYTGAARGVALYALLSFTAKFLKECQSLIYLKVKQQAYIEIAEHTFAHLHTLSLQWHLKKKMGNVIRSMDRGTEAANNLVTYLFLYLVPAIGECVATV 234
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A7S2UVY2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY2_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.640e-44 Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+ CSV SP FL+ ATN L + VG+Y LA +K LKEAQ +VYLKVKQ+AYVEIAE++FAHLH LSLQWHLKKKMGNV+RSMDRGT+AAN L+TYLFLYLVP++ EC+A
Sbjct: 89 KACSVASPVFLASATNDLANAQYRSAVVQVGLYCSLALASKWLKEAQGVVYLKVKQEAYVEIAERTFAHLHNLSLQWHLKKKMGNVIRSMDRGTEAANTLVTYLFLYLVPSLAECLA 205
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A7S3UX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX91_HETAK) HSP 1 Score: 150 bits (379), Expect = 8.690e-40 Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+ +V SP FL+ ATN L GD + N+G Y +F K KE Q LVYLKVKQ AY+EIA+++FAHLH LSLQWHLKK+MGNV+RSMDRG++AAN L YLFLYL+P++ EC+A
Sbjct: 141 KAATVTSPIFLAHATNRLAAGDYQACVTNLGAYVAFSFMGKFFKEMQGLVYLKVKQAAYIEIAQRTFAHLHNLSLQWHLKKRMGNVIRSMDRGSEAANTLTNYLFLYLLPSLAECLA 257
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: I2CPG9_NANGC (Atp-binding cassette superfamily (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG9_NANGC) HSP 1 Score: 136 bits (343), Expect = 1.100e-36 Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALY---GGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+V SV SP FLS AT+AL G D + G+Y LL+F ++ LKE Q+LVYL VK+ AY EI +F+HL LSL WHLKKK+G V+R+MDRGTDAA+ ++TYLFLYL+PA+GEC+A
Sbjct: 43 KVSSVYSPLFLSLATSALSSSPGPDYSRASLYAGVYCLLSFGSRFLKECQNLVYLDVKKVAYAEICSSTFSHLLNLSLHWHLKKKIGVVIRAMDRGTDAADTVVTYLFLYLLPALGECLA 162
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A0G4FKX7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKX7_VITBC) HSP 1 Score: 141 bits (355), Expect = 1.520e-36 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+ C+V +P FL A NAL G V + V ++ L F+ KALKE QSL+Y+KV+Q AY+EIA+ +F HLH LSLQWHLKK+MGNV+RSMDRG DAAN+L+T+ LYL+P++ EC A
Sbjct: 237 KTCNVCAPAFLGFAVNALTDGRVGGLITYVVLFGFLTFSGKALKECQSLLYIKVQQAAYIEIAQHTFQHLHNLSLQWHLKKRMGNVIRSMDRGCDAANSLMTWGVLYLIPSVAECFA 353
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A0K6S8V7_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8V7_9ALVE) HSP 1 Score: 140 bits (354), Expect = 2.110e-36 Identity = 69/126 (54.76%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALY---------GGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+ C+ ++P F+ A+ +L G + +T VG+Y +F +KALKE Q LVYL+VKQ AY+EIA+ +F HL LSLQWHLKKKMGNVVRSMDRGT+AA++L+TYLFLYL+P +GEC+A
Sbjct: 279 KACNAIAPLFIGLASASLREALDDAEGRSGHLYDTALWVGLYGAFSFLSKALKECQGLVYLRVKQAAYIEIAQFTFEHLQRLSLQWHLKKKMGNVVRSMDRGTEAADSLMTYLFLYLLPTVGECIA 404
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A7S0RG67_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RG67_9CHLO) HSP 1 Score: 137 bits (346), Expect = 1.670e-35 Identity = 59/115 (51.30%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGEC 345
++ ++++P +L++ATN L G++ NVG+Y L FT+ KE Q++ YL VKQ AY+EIA +F HLH LSL WHL+KKMGNV+R+MDRG ++AN+++ YLFLYL+P + EC
Sbjct: 211 KISNILAPLYLAKATNHLQQGNLQGATLNVGVYCALRFTSTTFKEFQNMAYLSVKQAAYIEIAHYTFVHLHNLSLDWHLRKKMGNVLRAMDRGVESANSVVNYLFLYLLPTMAEC 325
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A7S2KN46_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KN46_9DINO) HSP 1 Score: 135 bits (341), Expect = 9.680e-35 Identity = 66/126 (52.38%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 1 QVCSVMSPFFLSRATNALYG---------GDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
+VCS+++P FL+RATN + ++ + N+ +YA + +KALKEAQSL+Y+KV+Q AY+EIA+Q+FAHLH LSL WHL+KKMGNVVRSMDRG AA + Y+FLYL P + E +A
Sbjct: 133 KVCSIVAPIFLARATNQISDLLKEGPGPHSMTSDIITNLVLYAWMILLSKALKEAQSLIYIKVQQAAYIEIADQTFAHLHNLSLDWHLRKKMGNVVRSMDRGIQAAQQTMQYVFLYLFPTLAEALA 258
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Match: A0A7S3GVA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVA3_9STRA) HSP 1 Score: 128 bits (321), Expect = 9.790e-35 Identity = 56/115 (48.70%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 7 CSVMSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKQQAYVEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIGECVA 351
C++ +PFF++ A N L G + + + Y +L + +E QS++Y+KVKQQA +++ E +F HLHTLSL WHL KK G+V++SMDRG DAA++L+TYLFL+L+PA+ EC+A
Sbjct: 83 CNLYAPFFIADAANYLVAGQLVAATQQMVFYCILRTLSSFFREMQSILYIKVKQQASIQLQELTFTHLHTLSLNWHLSKKTGSVMKSMDRGVDAASSLVTYLFLFLIPAMAECLA 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19646.4996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19646.4996.1 >prot_H-paniculata_contig19646.4996.1 ID=prot_H-paniculata_contig19646.4996.1|Name=mRNA_H-paniculata_contig19646.4996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MSPFFLSRATNALYGGDVTETMKNVGIYALLAFTAKALKEAQSLVYLKVKback to top mRNA from alignment at H-paniculata_contig19646:133..735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19646.4996.1 ID=mRNA_H-paniculata_contig19646.4996.1|Name=mRNA_H-paniculata_contig19646.4996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=603bp|location=Sequence derived from alignment at H-paniculata_contig19646:133..735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19646:133..735- >mRNA_H-paniculata_contig19646.4996.1 ID=mRNA_H-paniculata_contig19646.4996.1|Name=mRNA_H-paniculata_contig19646.4996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig19646:133..735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |