mRNA_H-paniculata_contig1964.4994.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A6H5L390_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L390_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.860e-35 Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = 1
Query: 145 ATEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLWDKLHG 402
AT EQQA M +QAGAI++L DLEGT EI+ +L+LLLADRN +LD EMA IQRILTPTQ+AKFVLWVSKN+ACVHMLNQLWDKLHG
Sbjct: 301 ATPEQQAVMHNQAGAIADLVRDLEGTEEIVERLRLLLADRNQTLDGEMAAIQRILTPTQSAKFVLWVSKNKACVHMLNQLWDKLHG 386
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A3S7YS51_9STRA (Fructose-bisphosphatase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A3S7YS51_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.800e-19 Identity = 41/80 (51.25%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
T +QQA++ G++ + +DL+ T +L L+ L+ D+N SLD+E+ E+Q+ILTPTQTAKF+LW+++N AC+HMLNQLW
Sbjct: 685 TPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLW 764
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A4D9D2R2_9STRA (BZIP domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.120e-18 Identity = 41/80 (51.25%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
T EQQAA+ + I + +D+ T+ +L +L+ L+ D+N SLD+E+ E+Q+IL+PTQTAKF+LW+++N AC+HMLNQLW
Sbjct: 306 TREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLW 385
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A0P1AA06_PLAHL (Camp responsive element modulator n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA06_PLAHL) HSP 1 Score: 85.1 bits (209), Expect = 6.200e-17 Identity = 36/80 (45.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
+E+Q+ ++ Q G+IS + +L+ E+L++LK + ++N +LD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 156 SEDQKKKIQQQRGSISLICENLKSALELLAELKTEVTNKNSTLDTEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 235
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A835YXR1_9STRA (BZIP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR1_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 9.550e-16 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 208 DLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQ---------TAKFVLWVSKNEACVHMLNQLWDKLHGDTSRD*RDDLTV 438
DL T ++++ L+ LL +N SLD+EMA+IQRIL+PT TAKF+LWVS+N AC+HMLNQLW ++H + TV
Sbjct: 225 DLHNTLQLVAGLRSLLCTKNESLDDEMAQIQRILSPTXXXXXXXXXXTAKFILWVSRNAACMHMLNQLWTQVHEQPEEGITSETTV 310
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A6A3LMW2_9STRA (BZIP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LMW2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.570e-15 Identity = 36/80 (45.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
TE+Q+ ++ Q G+IS + +L+ +L++LK + ++N +LD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 354 TEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 433
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A7S0AC89_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AC89_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.440e-15 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLWDKLHGDTS 411
T+EQ A++ EL S L + +L +L+L L L+ EM ++ ILTPTQ AKF++WVS N AC+HMLN+LW++ +TS
Sbjct: 35 TQEQAKALKDSRLIAQELDSALTESLSVLEELRLRLTQAGEDLEAEMDSVRAILTPTQAAKFLVWVSNNSACMHMLNELWNQSMPETS 122
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: K3W9X4_GLOUD (BZIP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9X4_GLOUD) HSP 1 Score: 82.8 bits (203), Expect = 3.540e-15 Identity = 36/80 (45.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
TEEQ+ ++ Q G+I+ + +L+ +L++LK + +N +LD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 468 TEEQKKKIQQQRGSITLICENLKNALSLLNELKTEVIQKNTTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 547
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A3M6VDY9_9STRA (BZIP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDY9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.020e-15 Identity = 36/80 (45.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
+EEQ+ ++ Q G+IS + +L+ +L +LK + ++N +LD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 355 SEEQKKKIQQQRGSISLICENLKSALGLLGELKTEVTNKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 434
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Match: A0A5D6XWQ0_9STRA (BZIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWQ0_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.770e-15 Identity = 36/80 (45.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 148 TEEQQAAMRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTQTAKFVLWVSKNEACVHMLNQLW 387
+EEQ+ ++ Q G+IS + +L+ +L +LK + +N +LD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 455 SEEQKKKIQQQRGSISLICQNLKNALSLLDELKTEVIQKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1964.4994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1964.4994.1 >prot_H-paniculata_contig1964.4994.1 ID=prot_H-paniculata_contig1964.4994.1|Name=mRNA_H-paniculata_contig1964.4994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp MRSQAGAISELASDLEGTTEILSKLKLLLADRNHSLDEEMAEIQRILTPTback to top mRNA from alignment at H-paniculata_contig1964:19466..22650- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1964.4994.1 ID=mRNA_H-paniculata_contig1964.4994.1|Name=mRNA_H-paniculata_contig1964.4994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3185bp|location=Sequence derived from alignment at H-paniculata_contig1964:19466..22650- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1964:19466..22650- >mRNA_H-paniculata_contig1964.4994.1 ID=mRNA_H-paniculata_contig1964.4994.1|Name=mRNA_H-paniculata_contig1964.4994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=504bp|location=Sequence derived from alignment at H-paniculata_contig1964:19466..22650- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |