prot_H-paniculata_contig1964.4990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1964.4990.1
Unique Nameprot_H-paniculata_contig1964.4990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.340e-31
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 0
Query:    3 GFCGARPQRRLRPFKLKD-YTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAA-LHSIGLSISDGVAGPFQMDIAWISAI 116
            GFCG R  RR  P  L D Y  +EMR+RTDGR YEVN EP S I +D+YQ  + T AG+W T+ LPL++L LTG+GQ R  QR  +    L SIG +I+DGV GPF++D+AW++ +
Sbjct:  149 GFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALV 264          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: A0A835YW63_9STRA (Complex I intermediate-associated protein 30-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW63_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.140e-20
Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    1 RAGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSI----SDGVAGPFQMDIAWISAIQ 117
            R+GFC  R  +R R   L +Y  + ++VRTDGR Y VN+EP +    D+YQ  +   AG W  + LP D L  T RG+     R L+   L S+G SI      G  GPFQ+D+ W+ A Q
Sbjct:   83 RSGFCATRSPKRWRGVDLTEYEGLALKVRTDGRHYAVNIEPQTYFDTDLYQGYIIAPAGLWTVVTLPFDGLMHTSRGRVVDESRPLDAVHLLSLGFSIFKEIDKGREGPFQLDVQWVRARQ 203          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: W7U321_9STRA (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U321_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.140e-17
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    1 RAGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLD-THAGEWGTIVLPLDQLTLTGRGQYRVYQRALERA-ALHSIGLSISDGVAGPFQMDIAWISAI 116
            R G+C  + +   R F+++ Y  +E+ VRTDGR Y  N+E +S  PD++YQ  +     G+W TI LP   +TLT  G+    Q+ L+    L SIG  I+DG  GPF ++IA ++A+
Sbjct:  104 RTGYCALKVEM-PRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAV 220          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: L8GVE8_ACACA (Complex I intermediateassociated CIA30 protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVE8_ACACA)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-16
Identity = 37/115 (32.17%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    2 AGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWISAI 116
            AG+ G +P++R     L  + A+E+R +TDGR+Y  N++ DS++   ++QA   T   EW  +VLP D+ TLT +GQ       ++     ++   +++   G F+M++ W+ AI
Sbjct:   89 AGYAGLQPRQRKTIKSLDGFDALEVRAKTDGRVYIANIKTDSMVKHHLFQAFFTTRKDEWTNVVLPFDRFTLTFQGQVEGESLPIDPRQFQAVSFLMAERKDGEFRMELEWVKAI 203          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: F0W2C2_9STRA (Uncharacterized protein AlNc14C9G1172 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2C2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.810e-13
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    1 RAGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRA-LERAALHSIGLSISDGVAGPFQMDIAWISAI 116
            R+G+C  R  R  +  +L     ++MRV+TDGR++ VN++ +   P DI+   +     +W  I LP   L LT RG  ++     L  + L +IG +ISD   GPF++ + WI AI
Sbjct:   64 RSGYCAVRAPR-PKEVQLFGSQGLQMRVKTDGRIFRVNIQTEGWNPFDIHMGFIRAPPSKWVDIELPFSSLLLTSRGYVKMDDATVLYPSKLLNIGFAISDQEEGPFELRVQWIKAI 179          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: A0A6B2LQM7_9EUKA (CIA30 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LQM7_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 7.860e-13
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0
Query:    2 AGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDT-HAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWISAIQ 117
            +G+   R  R   P  L  + A+E+R++TDGRLY   V+  + +P+DIYQ  L      EW  +V+P     LT RG        ++   +   G+ +++   GPF M I WI AI+
Sbjct:   11 SGYVCLRSPRFDPPLNLDQFDALELRIKTDGRLYVAQVKTRTNVPEDIYQTILPPLPPNEWHRVVVPFQDFLLTWRGCTEEKIEPVQMDHIEHFGILMAERRNGPFSMHIDWIRAIK 127          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: A0A7Y2FIK2_9BACT (CIA30 family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2FIK2_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 2.550e-12
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   15 PFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWI 113
            P  L   T IE+RVR DGR Y++ +  D       ++A+ +T  GEW  + +P ++   T RG+       L+R  +  +GL ++D   GPF ++I WI
Sbjct:   66 PRNLAQATGIEVRVRGDGRTYQLRLRDDDRFDGAAFRASFETKKGEWTVVRIPFEEFVPTFRGRTLTNVPPLDREKIRQVGLMLADKNPGPFSLEIDWI 164          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: A0A7W5GXF7_9GAMM (Monofunctional biosynthetic peptidoglycan transglycosylase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7W5GXF7_9GAMM)

HSP 1 Score: 65.5 bits (158), Expect = 7.630e-11
Identity = 35/115 (30.43%), Postives = 55/115 (47.83%), Query Frame = 0
Query:    3 GFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWISAIQ 117
            GF   R  R    F L     + +RVR DGR Y++ +  D +     Y+A     AGEW    LP  +     RG+        +  A+  +GL I+D  AGPF++++ W+ A++
Sbjct:   52 GFASVR--REPEAFDLSKTAGLLLRVRGDGRRYQLRLRTDRLFDGGAYRALFQPAAGEWQQFALPWHEFEAVFRGRRLEDAPPFDPGAIQQVGLLIADRTAGPFRLEVDWLDAME 164          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: UPI001E1D7450 (complex I intermediate-associated protein 30, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7450)

HSP 1 Score: 66.6 bits (161), Expect = 1.520e-10
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 0
Query:    1 RAGFCGAR-PQRRLR-----PFKLKDYTAIEMRVRTDGRLYEVNVEPD---SVIPDDIYQATLDTHAGE-WGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWISAIQ 117
            RAG+C  R P  +L      P+    YT + +RVR DGR Y + ++ D    V   D+Y   L T  G  W T+ +P     L  RG+ +  Q+      + + GLS+ DGV GPF+++I +I+ ++
Sbjct:  182 RAGYCNLRSPYNKLAFERQVPYDWSRYTHMYLRVRGDGRNYMLLIQMDRFFDVQTHDMYNFPLYTRGGPYWQTVKVPFSSFFLANRGRAQDQQKPFSLDKVKNFGLSVGDGVKGPFRLEIDYIALVR 308          
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Match: UPI0005BCF058 (CIA30 family protein n=1 Tax=Halomonas halodenitrificans TaxID=28252 RepID=UPI0005BCF058)

HSP 1 Score: 63.5 bits (153), Expect = 3.660e-10
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query:   26 MRVRTDGRLYEVNVEPDSVIPDDIYQATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISDGVAGPFQMDIAWI 113
            +RVR DGR Y++ +  D +     Y+A     AGEW  + LP        RG+       L+ AAL  +GL I+D   GPF++++AW+
Sbjct:   74 LRVRGDGRRYQLRLRTDELFDGGAYRALFQPPAGEWQCVALPWHAFEAVFRGRQLEDAPPLDPAALRQVGLLIADRRPGPFRLELAWV 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1964.4990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW6_ECTSI1.340e-3152.59Complex I intermediate-associated protein 30, mito... [more]
A0A835YW63_9STRA1.140e-2040.50Complex I intermediate-associated protein 30-domai... [more]
W7U321_9STRA3.140e-1738.98NADH:ubiquinone oxidoreductase intermediate-associ... [more]
L8GVE8_ACACA1.180e-1632.17Complex I intermediateassociated CIA30 protein (Fr... [more]
F0W2C2_9STRA2.810e-1335.04Uncharacterized protein AlNc14C9G1172 n=1 Tax=Albu... [more]
A0A6B2LQM7_9EUKA7.860e-1333.33CIA30 domain-containing protein n=1 Tax=Arcella in... [more]
A0A7Y2FIK2_9BACT2.550e-1233.33CIA30 family protein n=1 Tax=Gemmatimonadetes bact... [more]
A0A7W5GXF7_9GAMM7.630e-1130.43Monofunctional biosynthetic peptidoglycan transgly... [more]
UPI001E1D74501.520e-1033.07complex I intermediate-associated protein 30, mito... [more]
UPI0005BCF0583.660e-1035.23CIA30 family protein n=1 Tax=Halomonas halodenitri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013857NADH:ubiquinone oxidoreductase intermediate-associated protein 30PFAMPF08547CIA30coord: 1..110
e-value: 2.5E-24
score: 86.1
IPR039131Complex I intermediate-associated protein 30, mitochondrialPANTHERPTHR13194COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30coord: 1..116
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 3..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1964contigH-paniculata_contig1964:350..1530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1964.4990.1mRNA_H-paniculata_contig1964.4990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1964 350..1530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1964.4990.1 ID=prot_H-paniculata_contig1964.4990.1|Name=mRNA_H-paniculata_contig1964.4990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
RAGFCGARPQRRLRPFKLKDYTAIEMRVRTDGRLYEVNVEPDSVIPDDIY
QATLDTHAGEWGTIVLPLDQLTLTGRGQYRVYQRALERAALHSIGLSISD
GVAGPFQMDIAWISAIQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013857NADH-UbQ_OxRdtase-assoc_prot30
IPR039131NDUFAF1
IPR008979Galactose-bd-like_sf