prot_H-paniculata_contig19622.4986.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19622.4986.1
Unique Nameprot_H-paniculata_contig19622.4986.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length417
Homology
BLAST of mRNA_H-paniculata_contig19622.4986.1 vs. uniprot
Match: A0A6H5KS39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS39_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.410e-36
Identity = 187/424 (44.10%), Postives = 220/424 (51.89%), Query Frame = 0
Query:   22 PVSTGLTVLVPGRVAATPAV----AALTRGVKKHQQQKKKG-CSCLTVVDGTGALEFNTEDVAALLTLALRRLRPFEPLAARLAAVAATHEKETKLAVYRGMQEDEPETGDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------AGDTVADGDSVGPERVGGGGLFARAS-----SPVFGVSSGGAVDELVAGTAXXXXXXXXXATSGLNADEASDLLEYVAAARFVAQLLSEPVVEAGIAAGRWVHTERLAEHVKKLAEADEKEPIAAAAGSSDLSSLVSRGQRNVSAGERGRGSLSSASDMLCLGALANVEELGARMAQQARFAPALEALLKGELRNALRRGQGRQRRLMSRLQPPTGPVVPRVIAFPMTRPCCCFVAY-GVGG 414
            P +  L+V+VPGR A         AA    V       ++G C C++V+D  GALEFNTEDVAALLTLAL R+ PF PLAAR+   A       K A + G  +D  E  D                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    +G  V  G+  G  +   G   ARAS     SP    S G   +E               A   L  DE++DLLE+VAAARF+AQLL+EPVV AG+A GRW    RL+E V+KLAE                           +A        SS S+MLCLGALA+V+ LG  MAQQAR+APALEA LK ELR ALR GQG +RR+  RLQ P  P    V +FPM  P C  + Y GV G
Sbjct:  630 PTAAALSVIVPGRAALLRQQGLLDAAWGSSVTAQAATAERGLCGCVSVLDDKGALEFNTEDVAALLTLALGRVHPFMPLAARITVAA-------KEAGWDGCGDDGDEALDARVWAAVQEYTLEGRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAADKLPSSGFAVKGGE--GEAKADAGSDGARASVADLASPSVPGSRGSVSEE-----------NGSAAGLELTVDESADLLEFVAAARFIAQLLAEPVVAAGVAGGRWSCAMRLSEQVRKLAE-------------EXXXXXXXXXXXXXTAPPT-----SSLSNMLCLGALADVQGLGLAMAQQARYAPALEAALKRELRQALRGGQGLKRRIKHRLQLPGAP---DVFSFPMITPACQLIHYEGVVG 1012          
BLAST of mRNA_H-paniculata_contig19622.4986.1 vs. uniprot
Match: D8LQ83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ83_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.830e-36
Identity = 172/376 (45.74%), Postives = 198/376 (52.66%), Query Frame = 0
Query:   59 CSCLTVVDGTGALEFNTEDVAALLTLALRRLRPFEPLAARLAAVAATHEKETKLAVYRGMQEDEPETGDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDTVADGDSVGPERVGGGGLFARASSPVFGVSSGGAVDELVAGTAXXXXXXXXXATSG-------------------LNADEASDLLEYVAAARFVAQLLSEPVVEAGIAAGRWVHTERLAEHVKKLAEADEKEPIAAAAGSSDLSSLVSRGQRNVSAGERGRGSLSSASDMLCLGALANVEELGARMAQQARFAPALEALLKGELRNALRRGQGRQRRLMSRLQPPTGPVVPRVIAFPMTRPCCCFVAY--GVG 413
            C C++V+D  GALEFNTEDVAALLTLAL R+ PF PLAAR+   A       K A + G  +D  E  D                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         S G       G      S  F V  G    +  AG+          A+                     L  DE++DLLE+VAAARF+AQLL+EPVV AG+A GRW    RL+E V+KLAE                                     SS S+MLCLGALA+V+ LG  MAQQAR+APALEA+LK ELR ALR GQG +RR+  RLQPP  P    V +FPM  P C  V Y  GVG
Sbjct:  432 CGCVSVLDDKGALEFNTEDVAALLTLALGRVHPFMPLAARITLAA-------KEAGWDGCGDDGDEALDARVWAAVQEYTLECRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAG-------GAVDELPSSDFAVKGGEGEAKADAGSDGARASVADLASPSVPGSRGSVSEENGSAAGLELTVDESADLLEFVAAARFIAQLLAEPVVAAGVAGGRWSCAMRLSEQVRKLAEXX------------XXXXXXXXXXXXXXXXXXXXPPTSSLSNMLCLGALADVQGLGLAMAQQARYAPALEAVLKRELRQALRGGQGLKRRIKHRLQPPGAP---DVFSFPMITPACQLVHYEGGVG 778          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19622.4986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS39_9PHAE1.410e-3644.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ83_ECTSI1.830e-3645.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19622contigH-paniculata_contig19622:645..1895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19622.4986.1mRNA_H-paniculata_contig19622.4986.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19622 520..3061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19622.4986.1 ID=prot_H-paniculata_contig19622.4986.1|Name=mRNA_H-paniculata_contig19622.4986.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=417bp
MNATAETSAFAAMVPPHDGDYPVSTGLTVLVPGRVAATPAVAALTRGVKK
HQQQKKKGCSCLTVVDGTGALEFNTEDVAALLTLALRRLRPFEPLAARLA
AVAATHEKETKLAVYRGMQEDEPETGDDEGEDDSSDEGRDDGLDARIWTA
VQQHVAESRASVAAAAANAASASASVSAAGDTVADGDSVGPERVGGGGLF
ARASSPVFGVSSGGAVDELVAGTAAGGGESEDIATSGLNADEASDLLEYV
AAARFVAQLLSEPVVEAGIAAGRWVHTERLAEHVKKLAEADEKEPIAAAA
GSSDLSSLVSRGQRNVSAGERGRGSLSSASDMLCLGALANVEELGARMAQ
QARFAPALEALLKGELRNALRRGQGRQRRLMSRLQPPTGPVVPRVIAFPM
TRPCCCFVAYGVGGFM*
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