prot_H-paniculata_contig1962.4985.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1962.4985.1
Unique Nameprot_H-paniculata_contig1962.4985.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length806
Homology
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 6.480e-206
Identity = 411/844 (48.70%), Postives = 519/844 (61.49%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSDVSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPG--LRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEE-MVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGGLTAAIAGE------------------EEEKNRPEGLAVLLTLCGRLTEGQVLLGELLADNHAVVPDAATGAAATAVDGAAPNASGGRSNDEETQ--AESQALPSPXXXXXXXXXXXXXXXXXXXXXXX-AHLKASSAAAEVSRQVEAFSAEAXXXXXXXXXXXXRSRHRAAVSSNLAHESV-FDNEADFLAKSAAEQAERGGSGGGDGYFLDAAGRYLSGFASSFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGP-------------TSIVRYANLMEGQYTVVLFDLETTGLNADNHRIIQIAAKVMGSNDPNHTFSAYVDPEDVSVSTYIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAXXXXXXXXXXGGVVLVAHNAKFDHSFLLAEVIRGEFGRFAMGK-IGIVSILDTLPLLKDQGLWRQSNREVDLPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEGVLSAPGISDRWRSVASEQPSYQIPVPRSTAELQAAMDATVAQKAQSKSRSRRQYW 805
            +SATPIPRSLTLAL+GDME+SQ+REMP+G+ +I+TTL+PV +A +V++RLK R  +D    ++  R+H+AS TERYD LV++LGEDRV+LLHG+M++A+KNK L+EF+     GG  G  LRVLV+TSIIEVGVDVPRAGVCVVENAEMFGLSQLHQ+RGRLGRTDRGK   S +      QQP  P E+   +K+ TSHCILLYGP++G+ ATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEG+ KVADL +QG+LAEHA++ AR LVE W  +       +    AA +G                   +EE+ RPE L +LL LCG   + + LL      +    P  A G AA    G           + E +  A  +A   P                        A   +SS+A + + + EA +  A             S  +          +V FD+EADFL KSA+E AE            D    YLSGF  SFAPXXXXXXXXXXXXXXXXXXXXXX               P GP              +I+R A+L EG +TVV+ D+ETTGL A   R+IQ+AAKV+GS +P H+F+ +VDP  V V   ++E+TGITP+ILA N A+ F +VWP+F+ WL+GV  E  +            GGVV VAHNA+FDH FL  EV R  F RF MG+ +G+V I+D+L  LK+  LWRQ   +  +P RP  F LG VF+HLYG EMP +H A+GDV+GLE +LSAPGI++ WR VAS  PS QIPVPRS AELQAA +     +     R++   W
Sbjct:  182 LSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDTD-DKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFS-----GGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPASPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAAADAEEAAASGAPRVGGTVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLSGFA--SRTPPPGGADGDAAGVAAGXXXXXXXXXXREREAKEHAPQRATELPQSFPVAAATPDDVESLNTSTPAADAPPASSSSAPDFAARAEAEATAAVGVSGSRMTAGPGSSGKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEG-------QDEEDEYLSGF--SFAPXXXXXXXXXXXXXXXXXXXXXXSSGEVA---------PTGPPVGADGGASRGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGE-------GGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNIAARTRKPPARRTKADGW 992          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 619 bits (1597), Expect = 1.870e-201
Identity = 411/847 (48.52%), Postives = 517/847 (61.04%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSD-------------VSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPG--LRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEE-MVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVERWM-------GQTE----LQKKRSGGLTAAIAGE-----EEEKNRPEGLAVLLTLCGRLTEGQVLLGELLADNHAVVPDAATGAAATAVDGA-APNASGGRSNDEETQAESQALPSPXXXXXXXXXXXXXXXXXXXXXXX-AHLKASSAAAEVSRQVEAFSAEAXXXXXXXXXXXXRSRHRAAVSSNLAHESVFDNEADFLAKSAAEQAERGGSGGGDGYFLDAAGRYLSGFASSFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------PPGP-TSIVRYANLMEGQYTVVLFDLETTGLNADNHRIIQIAAKVMGSNDPNHTFSAYVDPEDVSVSTYIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAXXXXXXXXXXGGVVLVAHNAKFDHSFLLAEVIRGEFGRFAMGK-IGIVSILDTLPLLKDQGLWRQSNREVDLPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEGVLSAPGISDRWRSVASEQPSYQIPVPRSTAELQAAMDATVAQKAQSKSRSRRQYW 805
            +SATPIPRSLTLALYGDME+SQ+REMP+G+ +I+TTLVPV +A +V++RLK R  +D             ++  ++  R+H+AS TERYD LV++LGEDRV+LLHG+M++A+KN+ L+EF+     GG  G  LRVLV+TSIIEVGVDVPRAGVCVVENAEMFGLSQLHQ+RGRLGRTDRGK   S +      QQP  P E+   +K+ TSHCILLYGP++G+ ATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEG+ KVADL +QG+LAEHA++ AR LVE W          TE        R GG  A   G      +EE  RPE L +LL LCG   + + LL      +   +P AA G AA  V G  A   +     + +  A  +A   P                          L ASS+  +   + EA +                          +     FD+EADFL KSA+E AE            D    YLSGF  SFAP    XXXXXXXXXXXXXXXXXXXXX                  P G   +I+R A+L EG +TVV+ D+ETTGL A   R+IQ+AAKV+GS +P H+F+ Y+DP  V V   ++E+TGITP+ILA N A+ F +VWP+F+ WL+GV  E  +            GGVV VAHNA+FDH FL  E+ R  F RF MG+ +G+V I+D+L  LK+  LWRQ   +  +P RP  F LG VF+HLYG EMP +H A+GDV+GLE +LSAPGI++ WR VAS  P+ QIPVPRS AELQAA +     +     R++   W
Sbjct:  568 LSATPIPRSLTLALYGDMEISQIREMPRGAANIETTLVPVAKAKEVMDRLKGREDTDDKARCGVFWVLPQINKSESSARQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNRRLSEFS-----GGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPATPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAADTEDAAASGAPRKGGTVALKEGGPGADCDEEGGRPESLGLLLVLCGLGADAEALLSGFA--SRTPLPGAADGDAAGVVAGGEADRGAEAIEREAKEHAPERATEFPQSLPVAAATPDGVESLITSTPAADPPLAASSSTPDFVVRAEATAGVGGVLDSRTTTGPDSRSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMED-------QDEEDEYLSGF--SFAPPLQPXXXXXXXXXXXXXXXXXXXXXFSGGVAPTGTPVGGXXGAPSGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGE-------GGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGWRGVASSHPACQIPVPRSLAELQAATNIAARSRKPPARRTKADGW 1391          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A836CEI0_9STRA (ATP-dependent DNA helicase RecG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI0_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.710e-70
Identity = 285/901 (31.63%), Postives = 390/901 (43.29%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSD--------VSDDKAGG---REHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYI---EGRLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGG---------LTAAI----AGEEEEKN---------RPEGLA--VLLTLCGRLTEGQ---------------VLLGELLADNHAVVPDAATGAAATAVDGAAPNASGGRSNDEETQAESQALPSPXXXXXXXXXXXXXXXXXXXXXXXAHLKASSA-------------------------------------------------------------------------AAEVSRQVEAFSAEAXXXXXXXXXXXXRSRHRAAVSSNLAHESVFDNEADFLAKSAAEQAERGGSGGGDGYF--LDAAGRYLSGFASSFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGPTSIVRYANLMEGQYTVVLFDLETTGLNADNHRIIQIAAKVM-----GSNDPNHTFSAYVDPEDVSVSTYIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAXXXXXXXXXXGG--VVLVAHNAKFDHSFLLAEVIRGEFGRFAMGKIGIVSILDTLPLLKDQGLWRQSNREVDLPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEGVLSAPGISDRWRSVAS 766
            MSATP PR+L+L  +GD++V+ LRE P+G+     T + V+R   +++   + A +D        V +  +GG   R H+AS   R+  L E LGE+RV LLHGRM+AA+KN+ L  FA    + G P +RVLVAT+IIEVGVD+P A VCV+ENAE FGLSQLHQ+RGR+GR+                 +    A  +       HC+LLY  + G+ A  RLK +  T DGF +AE DL LRGPGE+LGVRQKG++    G  +V DL +   L   A+ +AR LVE    ++        G         L +A+    AG E + +         RP   A  V L + G    G                V+ G  L   HA+  DAA   ++    G   +AS G    E  Q  + AL   XXXXXXXXXXXXXXXXXXXXXXX                                                                                  +E +   EA   E              +  RAA          F+N +D+      E      S      F  L    R   G     AP                                         T  +   +L   ++  V+ D+ETTG +    R++QIAA V+     G+    H F+ Y DP    +S  IQ LTGITP++L    A  F + W QF  WL       A+AA           G  +VL+AHNA FDH FL+AE  R   G  A+   GI + +D++ L+KD+ LWRQ+  +      P    L  V+++L G+++  +H A+ DVI L  V++   + DRWR +AS
Sbjct:  562 MSATPTPRTLSLTAFGDVDVALLREKPRGASQHVQTTLTVERVRAILDD-PATAHADKVFWVLPLVQEAPSGGTRRRAHLASAERRHASLAEALGEERVGLLHGRMTAAEKNRVLARFA----EPGSP-MRVLVATTIIEVGVDIPEARVCVIENAEQFGLSQLHQMRGRIGRSGXXXXXXXXXXXXXATARSDAAARAVEGAAAACHCVLLYHESAGEVAVRRLKVMSETTDGFAIAEEDLKLRGPGELLGVRQKGFLFGGAGGFRVCDLDKHAALVPPAHAHARRLVEAAGARSXXXXXXXXGDVRPLCALHLLSALFQSGAGAEAQGSSAQQAGGGKRPAIAANGVALPVKGARKAGSGXXXXXXXXXEQEQDVVRGVGLEVAHALGLDAAL-LSSEPTHGVGQHASDGGDATESRQLLAAALSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSETTVVSEALRVELFIPERTSRALPTSATERAAXXXXXXXAWPFENLSDYAPADDEEDVVASTSDNDWLSFSELPPIPRQAGGLRLKAAPSASARGSKA------------------------------ADTPSLPPLDLTSEEHMFVVLDVETTGFSFAYDRVLQIAAAVLSVDGGGALQHGH-FNMYCDPAKY-ISAKIQGLTGITPQLLRSKGAVKFPQAWQQFQAWL------NAAAAQHKATNGNATSGTSIVLIAHNANFDHGFLVAETERAGLGSDAISSAGITAFVDSVALVKDRDLWRQAGMDP-----PPTNKLTDVYEYLEGRKVSDAHNAMADVIALATVVNGSVLRDRWREMAS 1412          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: W7TB29_9STRA (Atp-dependent dna helicase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB29_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.590e-66
Identity = 256/825 (31.03%), Postives = 362/825 (43.88%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAM------------------------SDVSDDKAG--GRE--HVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLY---GPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGGLTAAIA-GEEEEKNRPEGLAVLLTLCGRLTEGQVLLGELLADNHAVVPDAATGAAATAVDGAAPNASGGRSNDEETQAESQALPSPXXXXXXXXXXXXXXXXXXXXXXXAHLKASSAAAEVSRQVEAFSAEAXXXXXXXXXXXXRSRHRAAVSSNLAHESVFDNEADFLAKSAAEQAERGGSGGGDGYFLDAAGRYLSGFASSFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGPTSIVRYANLMEGQYTVVLFDLETTGLNADNHRIIQIAAKVM-------------------------GSNDPNHTFSAYVDPEDVSVSTYIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAXXXXXXXXXXGGVVLVAHNAKFDHSFLLAEVIRGEFG-RFAMGKIGIVSILDTLPLLKDQGLWRQSNREVD-LPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEGVLSAPGISDRWRSVAS 766
            MSATPIPR+L L  YGDMEVS+L E P     + T++ P+     + ERL+ + +                        ++  ++K G  G E   + SVT+R+  +VE LGE+ V ++HGRM +  K + L +F+  V        RVLV+TS++EVGVDVP A VC+VE+AE FGLSQLHQ+RGR+GR   G A   +S  AD          +++++ T  HC+L Y    PN  + A +RL  ++ T DGF +AE+DL LRGPGEVLG RQ G+   RL   DL +   L + AN+ AR   +       + ++  G    A+A G   E    EG+  LL    R+ E +                              P +SG     E  Q ESQ  PS XXXXXXXXXXXX                       S+        A             S+ +   S   +  +   N     A S+      G +             Y   F  S  P                                      P P   +   +L     T ++FD ETTGL A++ RIIQ+AAKV+                         G  +    F+AYVDP    +   I E+TGI+ + L   +A+ F EVWP F  W+  V G +                VVLVAHNA FDH  L+ ++ R     R    +  IV ++DTL + +   +W  S R  D LPI+P  F  G ++++L   ++  +H+A GDV+GLE +L  P ++ +WRS  S
Sbjct:  156 MSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT-------RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR---GYA---VSAKAD---------RKVMDQLTECHCVLAYDDTSPNK-EKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRL--VDLAKHEGLLDEANQVARAHAD------SVVRREEGATVEAVAHGNVLEY---EGVETLL----RIFEAK------------------------------PPSSG-----ENIQRESQ--PSSXXXXXXXXXXXX-----------------------SKNKFLLEPTASPSSSMKLSMGGMSKKKPPTSLQKSKSAPIANACTAPAPSSISDLPPGWT----------TVTYGDRFEISTPPPSSGDEENEGGELTLMPGTEPVLSTRFSIDDL------PIPRVSI---DLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKP---------------VVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIW--SRRSGDGLPIKPNTFRQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGS 845          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A4D9CQG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQG2_9STRA)

HSP 1 Score: 244 bits (623), Expect = 3.960e-64
Identity = 251/824 (30.46%), Postives = 357/824 (43.33%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAM------------------------SDVSDDKAG--GRE--HVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLY---GPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGGLTAAIAGEEEEKNRPEGLAVLLTLCGRLTEGQVLLGELLADNHAVVPDAATGAAATAVDGAAPNASGGRSNDEETQAESQALPSPXXXXXXXXXXXXXXXXXXXXXXXAHLKASSAAAEVSRQVEAFSAEAXXXXXXXXXXXXRSRHRAAVSSNLAHESVFDNEADFLAKSAAEQAERGGSGGGDGYFLDAAGRYLSGFASSFAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGPTSIVRYANLMEGQYTVVLFDLETTGLNADNHRIIQIAAKVMGSND-------------------------PNHTFSAYVDPEDVSVSTYIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAXXXXXXXXXXGGVVLVAHNAKFDHSFLLAEVIRGEFG-RFAMGKIGIVSILDTLPLLKDQGLWRQSNREVD-LPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEGVLSAPGISDRWRSVAS 766
            MSATPIPR+L L  YGDMEVS+L E P     + T++ P+     + ERL+ + +                        ++  ++K G  G E   + SVT+R+  +VE LGE+ V ++HGRM +  K + L +F+  V        RVLV+TS++EVGVDVP A VC+VE+AE FGLSQLHQ+RGR+GR   G A   +S  AD          + +++ T  HC+L Y    PN  + A +RL  ++ T DGF +AE+DL LRGPGEVLG RQ G+   RL   DL +   L + AN+ AR                        A  +    R EG  V     G + E + +   L                   +  A P++SG     E  Q ES+  PS                    XXXX   K S+     S+      + A XXXXX       S+ +   S   +  +   N     A S+      G +             Y   F  S  P                                      P P   +   +L     T ++FD ETTGL A++ RIIQ+AAKV+  +D                             F+ YVDP    +   I E+TGI+ + L   +A+ F EVWP F  W+  V G +                VVLVAHNA FDH  L+ ++ R     R    +  IV ++DTL + +   +W  S R  D LPI+P  F  G ++++L   ++  +H+A GDV+GLE +L  P ++ +WRS  S
Sbjct:  574 MSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT-------RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR---GYA---VSAKAD---------RKAMDQLTECHCVLAYDDTSPNK-EKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRL--VDLAKHEGLLDEANQVAR------------------------AHADSVVRREEGCTVEAVAHGNILEYEGVETLLR------------------IFEAKPSSSG-----ENIQKESR--PS-------------------SXXXXXXXKVSTQ----SKNNSLLESTASXXXXXKLSMGGVSKKKPPTSLQKSKSAPIANACTAPAPSSISDLPPGWT----------TVTYGDRFEISTPPPSSGDEEIEGGELTLMPGTEPVLSTRFSIDDL------PIPRVSI---DLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSDWGGGEDDEQANQLAAAGLASGGEPEDGLLFNGYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKP---------------VVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIW--SRRSGDGLPIKPNTFRQGALYRYLLRDDLQNAHSAKGDVLGLEALLKHPFVNKKWRSAGS 1263          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A3C0FNP0_9PROT (ATP-dependent DNA helicase RecG (Fragment) n=1 Tax=Thalassospira sp. TaxID=1912094 RepID=A0A3C0FNP0_9PROT)

HSP 1 Score: 190 bits (482), Expect = 4.310e-50
Identity = 125/302 (41.39%), Postives = 167/302 (55.30%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSD----------VSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGGL 292
            M+ATPIPR+LTL  +GDMEVS+L E P G   +DT ++P+D+ +DV+  +  RAM            V D +      + +  ERY VL E  G+DRV L+HG+M   +K++ + +FA            +LVAT++IEVGV+VP A + V+E+AE FGL+QLHQ+RGR+GR D                               S C+LLYG  LG  +  RLK +R T DGF++AE DL LRG GEVLG RQ G  E RL  A+L   G L   A   AR +V+R     +LQK R   L
Sbjct:   90 MTATPIPRTLTLTAFGDMEVSRLDEKPPGRKPVDTRVLPIDKVDDVISGI-GRAMRSGTKIYWVCPLVEDSEILD---LQAADERYRVLAELFGQDRVGLVHGKMKGKEKDEVMEKFAHG-------DTSILVATTVIEVGVNVPEATIMVIEHAERFGLAQLHQLRGRIGRGD-----------------------------AASTCLLLYGSPLGQVSKARLKIMRETEDGFIIAEEDLKLRGAGEVLGTRQSGLQEYRL--ANLELHGDLLAIARDDARLIVDR---DPDLQKARGDAL 346          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A533J6G4_9BRAD (ATP-dependent DNA helicase RecG (Fragment) n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A533J6G4_9BRAD)

HSP 1 Score: 182 bits (462), Expect = 6.720e-48
Identity = 112/270 (41.48%), Postives = 153/270 (56.67%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSD----------VSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQ 260
            +SATPIPR+L L  +GDM+VS+LRE P G   IDT  VP+ R  +V + +  RA+            V + +A G EH+ + T+R++ L ++ G D V L+HG+M   DK++ + +FA      G  GL  LVAT+++EVGVDVP A + V+ENAE FGL+QLHQ+RGR+GR                                 S C+LLY   LG+ +  RL  IR T DGF +AE DL LRG G+VLGVRQ G    R+  +D+  Q
Sbjct:   38 LSATPIPRTLVLTYFGDMDVSELREKPAGRQPIDTRTVPLSRLEEVTDGV-GRALKSGKRVYWICPLVEESEAEGTEHLTNATKRFESLQKRFG-DAVGLVHGQMKGTDKDRVMAQFA-----SGEIGL--LVATTVVEVGVDVPAASIMVIENAERFGLAQLHQLRGRIGRGSEA-----------------------------STCLLLYKEPLGEMSKARLNVIRETTDGFRIAEEDLKLRGEGDVLGVRQSGLPGYRIARSDVHGQ 269          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A0B4XUX1_9PROT (ATP-dependent DNA helicase RecG n=16 Tax=Thalassospira TaxID=168934 RepID=A0A0B4XUX1_9PROT)

HSP 1 Score: 190 bits (482), Expect = 2.280e-47
Identity = 124/291 (42.61%), Postives = 162/291 (55.67%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAM---------------SDVSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVE 276
            M+ATPIPR+LTL  +GDMEVS+L E P G   +DT ++P D+A+DV+  +  RAM               S++ D        + +  ERY +LVE  GE RV L+HG+M A DK+  +  FA          L +LVAT++IEVGV+VP A + V+E+AE FGL+QLHQ+RGR+GR   G A S+                          C+LLYG  LG+ +  RLK +R T DGF++AE DL LRG GEVLG RQ G    RL  A L   G L   A   AR +VE
Sbjct:  420 MTATPIPRTLTLTAFGDMEVSRLDEKPPGRKPVDTRVLPADKADDVISGI-GRAMRTGTKIYWVCPLVEDSEILD--------LQAAEERYRILVELFGESRVGLVHGKMKAKDKDAVMERFAHG-------DLSILVATTVIEVGVNVPEATIMVIEHAERFGLAQLHQLRGRIGR---GNAAST--------------------------CLLLYGSPLGEISKARLKIMRETEDGFIIAEEDLRLRGAGEVLGTRQSGLQAYRL--ASLEMHGDLLAIARDDARLIVE 663          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A2E8XN49_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XN49_9PROT)

HSP 1 Score: 188 bits (478), Expect = 8.390e-47
Identity = 121/290 (41.72%), Postives = 160/290 (55.17%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSDVSDDKAGGR-------------EHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVER 277
            M+ATPIPR+L LA YGD++ SQLRE P G   + T+   VDR  D +  ++ +         AGG+             E VA+ T+R+  L ++ G D+V L+HGRMS   K+  ++ FA S E    P L +LVAT++IEVGVDVP A V +VE+AE FGL+QLHQ+RGR+GR +R                                C+LLYG  +G  A ERL  +R T DGF +AE+DL LRG G+VLG RQ G  + RL   DL   G L   A   AR ++ER
Sbjct:  425 MTATPIPRTLMLAAYGDLDESQLREKPAGRKPVKTSTASVDRLEDAISGVRRQL-------DAGGKVFWVCPLVEESETEDVAAATQRHSALQDRFG-DKVGLVHGRMSGKQKDAVMSRFAGSEE----PSLDILVATTVIEVGVDVPDATVMIVEHAERFGLAQLHQLRGRIGRGERDAT-----------------------------CLLLYGHGIGKTARERLTVLRDTDDGFEIAEQDLRLRGAGDVLGTRQSGLPDFRL--VDLAAHGELLAVARDDARLIIER 671          
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Match: A0A848YYM5_9PROT (ATP-dependent DNA helicase RecG (Fragment) n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848YYM5_9PROT)

HSP 1 Score: 187 bits (476), Expect = 1.350e-46
Identity = 123/286 (43.01%), Postives = 162/286 (56.64%), Query Frame = 0
Query:    1 MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERLKSRAMSD---------VSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADKNKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGLSQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCILLYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGRLKVADLTQQGTLAEHANRYARGLVER 277
            M+ATPIPR+LTL  YGDM+VS+L E P G   +DT  +P DR +DVV  +  +             V + ++G    +A+ TER+  L  + GE RV L+HGR+ AA+K+  +  FA    D       +LVAT++IEVGVDVP A V V+E+AE FGL+QLHQ+RGR+GR                       AE        S C+LLY P LG+ A  R++ +RAT DGF +AE DL LRG GEVLG RQ G  E R  +ADL   G L   A   AR +++R
Sbjct:  420 MTATPIPRTLTLTAYGDMDVSRLTEKPPGRKPVDTRALPADRIDDVVAAVARKIGQGAKVYWVCPLVEESESGD---LAAATERFRALGNRFGE-RVGLVHGRLKAAEKDAVMAGFAGDAID-------ILVATTVIEVGVDVPAATVMVIEHAERFGLAQLHQLRGRIGRG----------------------AE-------ASTCLLLYAPPLGETARARIETLRATDDGFRIAEEDLRLRGAGEVLGTRQSGLPEFR--IADLAVHGELLAAARDDARLVLDR 663          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1962.4985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPN7_ECTSI6.480e-20648.70ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A6H5JXY9_9PHAE1.870e-20148.52ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A836CEI0_9STRA1.710e-7031.63ATP-dependent DNA helicase RecG n=1 Tax=Tribonema ... [more]
W7TB29_9STRA3.590e-6631.03Atp-dependent dna helicase (Fragment) n=1 Tax=Nann... [more]
A0A4D9CQG2_9STRA3.960e-6430.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A3C0FNP0_9PROT4.310e-5041.39ATP-dependent DNA helicase RecG (Fragment) n=1 Tax... [more]
A0A533J6G4_9BRAD6.720e-4841.48ATP-dependent DNA helicase RecG (Fragment) n=3 Tax... [more]
A0A0B4XUX1_9PROT2.280e-4742.61ATP-dependent DNA helicase RecG n=16 Tax=Thalassos... [more]
A0A2E8XN49_9PROT8.390e-4741.72ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]
A0A848YYM5_9PROT1.350e-4643.01ATP-dependent DNA helicase RecG (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 77..164
e-value: 3.2E-12
score: 56.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 82..163
e-value: 2.8E-10
score: 40.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 42..237
score: 10.828
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 552..763
e-value: 1.4E-9
score: 47.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 554..676
e-value: 3.5E-15
score: 56.9
NoneNo IPR availableGENE3D3.40.50.300coord: 7..274
e-value: 7.2E-43
score: 148.4
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 1..165
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 194..249
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 194..249
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 1..165
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 551..759
e-value: 7.2E-31
score: 109.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..251
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 551..752

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1962contigH-paniculata_contig1962:7053..22952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1962.4985.1mRNA_H-paniculata_contig1962.4985.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1962 7053..22973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1962.4985.1 ID=prot_H-paniculata_contig1962.4985.1|Name=mRNA_H-paniculata_contig1962.4985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=806bp
MSATPIPRSLTLALYGDMEVSQLREMPQGSCDIDTTLVPVDRANDVVERL
KSRAMSDVSDDKAGGREHVASVTERYDVLVEQLGEDRVSLLHGRMSAADK
NKTLTEFAMSVEDGGRPGLRVLVATSIIEVGVDVPRAGVCVVENAEMFGL
SQLHQIRGRLGRTDRGKARSSLSFSADGRQQPPLPAEEMVNKKTTSHCIL
LYGPNLGDAATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEG
RLKVADLTQQGTLAEHANRYARGLVERWMGQTELQKKRSGGLTAAIAGEE
EEKNRPEGLAVLLTLCGRLTEGQVLLGELLADNHAVVPDAATGAAATAVD
GAAPNASGGRSNDEETQAESQALPSPPEKKETRAAATSTPSAAVVVPPTA
HLKASSAAAEVSRQVEAFSAEASAAAAAAAAAAERSRHRAAVSSNLAHES
VFDNEADFLAKSAAEQAERGGSGGGDGYFLDAAGRYLSGFASSFAPPASQ
QQQRFQGNQEQQQQQRRHGEQRTNSQEVGGAAAPPGPTSIVRYANLMEGQ
YTVVLFDLETTGLNADNHRIIQIAAKVMGSNDPNHTFSAYVDPEDVSVST
YIQELTGITPKILAENKAQCFREVWPQFSGWLAGVDGERASAAAAAAGNG
KGSGGVVLVAHNAKFDHSFLLAEVIRGEFGRFAMGKIGIVSILDTLPLLK
DQGLWRQSNREVDLPIRPARFSLGVVFQHLYGKEMPGSHTALGDVIGLEG
VLSAPGISDRWRSVASEQPSYQIPVPRSTAELQAAMDATVAQKAQSKSRS
RRQYW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR027417P-loop_NTPase
IPR012337RNaseH-like_sf