mRNA_H-paniculata_contig1962.4984.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1962.4984.1
Unique NamemRNA_H-paniculata_contig1962.4984.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 3.150e-125
Identity = 201/318 (63.21%), Postives = 236/318 (74.21%), Query Frame = 1
Query:    1 ESLQDIQYRAPETCVHSAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGV---------QMRQRAESREVLPSMTRNTSALWGKAGE---RDLGELGRPMNREP--FNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ES Q+++Y+AP+  V SAVA PSSVARPNYHDALRRVAVVV QHIKTC+W+R+  EERE++             M+    S   L ++ RN SALWG+ G    R  G  G P + E   FN    E F E+QFVS   RY F+HAP MALPG   TLREV + P +P+V+EIY+FIKTLF+KA  SSECSLVCLIYVERL+ETA+ PLL  TWKPVLLCGL LASK+WQDLSS NVEFSTVYPE+SLK+INRLELLFLG M+WD SISSSLYAKYY ALRSL EK++FRRRYN+V++IDAPRA  V  RA+ V   V
Sbjct:    4 ESFQEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSWRRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 321          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 1.280e-112
Identity = 194/331 (58.61%), Postives = 230/331 (69.49%), Query Frame = 1
Query:    1 ESLQDIQYRAPETCVHSAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKST------GVQMRQRAESREVLPS---MTRNTSALWGKAGERDLGEL----------------GRPMNREP--FNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ES  +++Y+AP+  V SAVA PSSVARPNYHDALRRVAVVV QHIKTC+W+R+  EERE++       G +   + E+ + + S   M     A W                           G P + E   FN    E+F E+QFVS   RY F+HAP MALPG   TLREV + P +P+V+EIY+FIKTLF+KA  SSECSLVCLIYVERL+ETA+ PLL  TWKPVLLCGL LASK+WQDLSS NVEFSTVYPE+SLKSINRLELLFLG M+WD SISSSLYAKYY ALRSL EK++FRRRYN+V++IDAPRA  V  RA+ V   V
Sbjct:  239 ESFHEMKYKAPDRRVFSAVAPPSSVARPNYHDALRRVAVVVYQHIKTCQWKRKMAEERERAPAETETEGSRQDMKVENSDEMTSVVVMPVRDGARWPGXXXXXXXXXXXXXXXXXXXXXXXGGGEPSSAEVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREV 569          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.550e-97
Identity = 174/307 (56.68%), Postives = 215/307 (70.03%), Query Frame = 1
Query:    4 SLQDIQYRAPETCVHSAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKAGERDLGELGRPMN------REPFNLHKVEMFHEKQFVSSQFRYKFVHA--PVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAV 900
            +L  +QYRAPE  V SAVA PSSVARPNYHDA+RRVAVVV QH++ CE R            +   +RA      P  TR  +      G    G +  P+       RE F+  K ++FHE+ +VS ++R  FV A     ALP +A  + +V T P +PSV  IY+FI+TLF++AC SSECSLVCLIY+ERL+E A  PLLA TWKPV+LCGL LASK+WQDLSS NVEFSTVYPEFSL+SINRLE ++L Q++WD  IS+SLYAKYY ALRSLAE ++FRRRYN V++IDAPRA+RVQER+ AV
Sbjct:  210 ALGTVQYRAPEKRVPSAVAPPSSVARPNYHDAIRRVAVVVFQHVQNCERR------------LARVKRAAEHPPRPPPTR--APPHAPFGGGQPGGVSAPLPVTPGAVREAFDPAKADLFHERHYVSPRYRCTFVRALGAAGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQIDAPRADRVQERSLAV 502          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: H3GWN2_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GWN2_PHYRM)

HSP 1 Score: 251 bits (640), Expect = 7.250e-78
Identity = 144/313 (46.01%), Postives = 199/313 (63.58%), Query Frame = 1
Query:   16 IQYRAPET-CVHSAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEE-----REKSTGVQMRQRAESR---EVLPSMTRNTSALWGKAGERD-----LGELGRPMNREPFNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            +QYR P+   V S  +S SS+A+PNY D LRRV+VV+ QHI+ CE R RE           +  V     +E R      P+ T++T+A   + G+ D     L       +    +L   E F E+ FV+ Q++Y FV  P +  P     + ++ +    PSV+EI+ F K LF+KA  S+EC++VCLIY+ERL+E A  PLLA TW+P+++CGL LASK+WQDLSS NVE S +YP+FSL SINRLE LFL  ++WD  IS+++YAKYY ALRSL EKK+FRRRYN  M++D P + R++ER+ AV H +
Sbjct:   64 LQYRKPDDRVVGSTPSSVSSIAQPNYDDFLRRVSVVLYQHIRRCEKRHREQHRGGGFSNAIAAAVSALTTSEERPNESRSPTPTQDTAAFNDEIGDEDFDRDELNNASSISSPRLVDLPVEETFREEHFVTPQYKYTFVRLPRVH-PLTVYRMEKITSKRHVPSVDEIFKFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSKRLEERSAAVKHEL 375          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A5D6XKS8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKS8_9STRA)

HSP 1 Score: 248 bits (633), Expect = 7.710e-77
Identity = 147/312 (47.12%), Postives = 198/312 (63.46%), Query Frame = 1
Query:   16 IQYRAPETCVHSAV--ASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKAGERDLGEL---------GRPMNREP--FNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ++YR P+  V S    ++ SSVA+PNY D LRRV+VV+ QH++ CE  +R +EE  +   V        R   P +    SA+  + GE D  EL         G      P    L   E+F E+ FV+ Q++Y FV  P    P  +  + +V +    PSV+EI+ F K LF+KA  S+EC++VCLIY+ERL+E A  PLLAVTWKP++LCGL LASK+WQDLSS NVE S +YP++ L SINRLE LFL  ++WD  IS+S+YAKYY ALRSL EKK+FRRRYN  M++D P + R++ER+ AV H +
Sbjct:   70 LRYRKPDDRVTSLAPPSAVSSVAQPNYDDFLRRVSVVLYQHLRRCE--KRHSEEL-RGPSVVSSTVGVDRGTSPFL----SAVVSREGEPDALELPSAPLAPSTGPSSTTSPRLLELPVDEIFREEHFVTPQYKYTFVRLP-RVFPMTSFVMEKVSSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAVTWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQYPLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSRRLEERSAAVRHEL 373          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A6G0WM95_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM95_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.080e-75
Identity = 146/320 (45.62%), Postives = 198/320 (61.88%), Query Frame = 1
Query:    4 SLQDIQYRAPETCVH--SAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKAGERDLGELGRPMNREPFNLHKV---------------EMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            S   ++YRAP+  V    A+  PSSVA+PNY D+LRRV+VV+ QHI+ CE R R++    KST  Q         +  S   N S   G+     + +   P N   F+   V               ++F E+ FVS Q++Y+F+  P++  P     + +V      PSV+EI+ F K LF++A  S+EC++VCLIY+ERL+E A  PLL  +WKP++LCGL LASK+WQDLSS NVE S VYP+F L SINRLE LFL  ++WD  IS S+YAKYY ALRSL EKK+FRRRYN  +KID P + R++ER+ AV + +
Sbjct:   43 STNGLKYRAPDARVDVSEALPPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRMRDS----KSTAFQG--------LFSSNPANAS---GEVSSSTINDED-PDNSVSFDASTVLHGHTLLSGLALSPDKVFDEEHFVSPQYKYQFIRVPMLH-PLTFYKMDKVTCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A3M6VRG7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRG7_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.500e-75
Identity = 144/331 (43.50%), Postives = 204/331 (61.63%), Query Frame = 1
Query:   16 IQYRAPETCV--HSAVASPSSV---ARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKA---------------------GERDLGELGRPMNREPFNLHKV------EMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ++YR P+  +   +++A PSSV   A+PNY D LRRV+VV+ QHI+ CE R RE ++R  STG        +   L ++      ++G +                     G+ D  EL    N    +  K+      E+F E+ FV+ Q++Y FV  P +  P     + ++ +    PSV+EI+ F K LF+KA  S+EC++VCLIY+ER++E A  PL+A TWKP++LCGL LASK+WQDLSS NVE S +YP+FSL SINRLE LFL  ++WD  IS+++YAKYY ALRSL EKKNFRRRYN  M++D P + R++ER+ A+ H +
Sbjct:   53 LRYRKPDDRMVGSTSLAPPSSVSSIAQPNYDDFLRRVSVVLYQHIRRCEKRHRE-QQRNGSTGGMTNAITAAVSALTTLEDRPLNVYGSSNHTLETATFHAETLTCLSDSEGDEDTQELN-TTNSSTISSPKLLDLPVEEIFREEHFVTPQYKYTFVRLPRVH-PMTVYRMEKITSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERVMEQANVPLVAATWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKNFRRRYNYTMRVDPPNSKRLEERSAAIKHEL 380          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A1V9ZAD2_9STRA (Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZAD2_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.520e-75
Identity = 144/304 (47.37%), Postives = 195/304 (64.14%), Query Frame = 1
Query:   16 IQYRAPETCVH--SAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKAGERDLGELGRP---MNREPFNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ++YRAP+  V     +A PSSVA+PNY D+LRRV+VV+ QHI+ CE R RET     +T  Q+   A +    PS+  + S    +    D   +  P   ++    +L KV  F E+ FVS Q++Y FV  P +  P     + +V      PSV EI+ F K LF++A  S+EC++VCLIY+ERL+E A  PLL  +WKP++LCGL L+SK+WQDLSS NVE S +YP+F L  INRLE LFL  ++WD  IS S+YAKYY ALRSL EKK+FRRRYN  +KID P + R++ER+ AV + +
Sbjct:   47 LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRLRETAHL--ATSSQVSYGATTLSGEPSVEASMSRSDHRTESFDSSTVHPPNGILSGLQLSLDKV--FDEEHFVSPQYKYTFVRLPTLH-PLTYYRMDKVNCKTHIPSVEEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGSSWKPIVLCGLLLSSKVWQDLSSWNVEISNIYPQFPLHCINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 345          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: A0A485KW34_9STRA (Aste57867_12616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW34_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.430e-75
Identity = 146/312 (46.79%), Postives = 197/312 (63.14%), Query Frame = 1
Query:    4 SLQDIQYRAPETCVH--SAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLP--SMTRNTSALWGKAGERDLG-ELGRPMNREP----FNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            S   ++YR P   V     +  PSSVA+PNY D+LRRV+VV+ QHI+ CE R RE+    K   +    R  S  V+   +M   T+   G A   D   +    MN +      NL   ++F E+ FV+ Q++Y+FV  P++  P     + +V      PSV+EI+ F K LF++A  S+EC++VCLIY+ERL+E A  PLL  +WKP++LCGL LASK+WQDLSS NVE S VYP+F L SINRLE LFL  ++WD  IS S+YAKYY ALRSL EKK+FRRRYN  +KID P + R++ER+ AV + +
Sbjct:   43 STNGLKYREPHARVDVSETLPPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRMRES----KGASLPGLFRPLSTSVMTESAMDDPTADNLGMASMPDDSFDSSTVMNGQTVLSGLNLSPDKVFDEEHFVTPQYKYQFVRLPMLH-PLTYYKMDKVSCKTHLPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERANIPLLGASWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 349          
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Match: W4G411_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G411_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.830e-74
Identity = 141/311 (45.34%), Postives = 197/311 (63.34%), Query Frame = 1
Query:   16 IQYRAPETCVH--SAVASPSSVARPNYHDALRRVAVVVCQHIKTCEWRRRETEEREKSTGVQMRQRAESREVLPSMTRNTSALWGKA----------GERDLGELGRPMNREPFNLHKVEMFHEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*SPSVNEIYDFIKTLFSKACHSSECSLVCLIYVERLIETAQAPLLAVTWKPVLLCGLRLASKIWQDLSS*NVEFSTVYPEFSLKSINRLELLFLGQMRWDTSISSSLYAKYYIALRSLAEKKNFRRRYNQVMKIDAPRANRVQERADAVTHSV 912
            ++YRAP+  V     +A PSSVA+PNY D+LRRV+VV+ QHI+ CE R RE++    +          S    P+ + + +A+  +           G+  L  LG         + +  +F E+ FV+ Q++Y+FV  P++  P     + +V      PSV+EI+ F K LF++A  S+EC++VCLIY+ERL+E A  PLL  +WKP++LCGL LASK+WQDLSS NVE S VYP+F L SINRLE LFL  ++WD  IS S+YAKYY ALRSL EKK+FRRRYN  +KID P + R++ER+ AV + +
Sbjct:   48 LKYRAPDARVDVSETLAPPSSVAKPNYDDSLRRVSVVLYQHIRRCEKRMRESKSGGGTLSGGFHGLFHSNSA-PASSTHAAAVEDEPFPFDSSTVLNGQTVLSNLG---------VSRESVFDEEHFVTPQYKYQFVRLPMLH-PLTYYKMDKVSCKTHIPSVDEIFRFCKNLFNRAQLSAECTIVCLIYIERLMERASIPLLGSSWKPIVLCGLLLASKVWQDLSSWNVEISNVYPQFPLHSINRLERLFLHYIQWDLYISGSVYAKYYFALRSLTEKKDFRRRYNYTIKIDPPNSKRLEERSAAVKNEL 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1962.4984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI3.150e-12563.21Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE1.280e-11258.61Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YNR4_9STRA1.550e-9756.68Cyclin N-terminal domain-containing protein n=1 Ta... [more]
H3GWN2_PHYRM7.250e-7846.01Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A5D6XKS8_9STRA7.710e-7747.12Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WM95_9STRA1.080e-7545.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3M6VRG7_9STRA1.500e-7543.50Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A1V9ZAD2_9STRA1.520e-7547.37Cyclin-Y-like protein n=2 Tax=Saprolegniaceae TaxI... [more]
A0A485KW34_9STRA3.430e-7546.79Aste57867_12616 protein n=1 Tax=Aphanomyces stella... [more]
W4G411_9STRA1.830e-7445.34Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1962contigH-paniculata_contig1962:2944..3878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score70.1
Seed ortholog evalue5.8e-10
Seed eggNOG ortholog2880.D7FH74
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG1675@1,KOG1675@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size912
Cds size261
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1962.4984.1prot_H-paniculata_contig1962.4984.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1962 3139..3422 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929487.304501-UTR-H-paniculata_contig1962:2943..31381622929487.304501-UTR-H-paniculata_contig1962:2943..3138Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1962 2944..3138 +
1691480882.862542-UTR-H-paniculata_contig1962:2943..31381691480882.862542-UTR-H-paniculata_contig1962:2943..3138Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1962 2944..3138 +
1622929487.358135-UTR-H-paniculata_contig1962:3422..38781622929487.358135-UTR-H-paniculata_contig1962:3422..3878Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1962 3423..3878 +
1691480882.8863592-UTR-H-paniculata_contig1962:3422..38781691480882.8863592-UTR-H-paniculata_contig1962:3422..3878Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1962 3423..3878 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929487.3187492-CDS-H-paniculata_contig1962:3138..32341622929487.3187492-CDS-H-paniculata_contig1962:3138..3234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1962 3139..3234 +
1691480882.8714697-CDS-H-paniculata_contig1962:3138..32341691480882.8714697-CDS-H-paniculata_contig1962:3138..3234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1962 3139..3234 +
1622929487.3343704-CDS-H-paniculata_contig1962:3257..34221622929487.3343704-CDS-H-paniculata_contig1962:3257..3422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1962 3258..3422 +
1691480882.8788972-CDS-H-paniculata_contig1962:3257..34221691480882.8788972-CDS-H-paniculata_contig1962:3257..3422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1962 3258..3422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1962.4984.1

>prot_H-paniculata_contig1962.4984.1 ID=prot_H-paniculata_contig1962.4984.1|Name=mRNA_H-paniculata_contig1962.4984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MRQRAESREVLPSMTRNTSALWGKAGERDLGELGRPMNREPFNLHKVEMF
HEKQFVSSQFRYKFVHAPVMALPGAALTLREVCTVP*
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mRNA from alignment at H-paniculata_contig1962:2944..3878+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1962.4984.1 ID=mRNA_H-paniculata_contig1962.4984.1|Name=mRNA_H-paniculata_contig1962.4984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=935bp|location=Sequence derived from alignment at H-paniculata_contig1962:2944..3878+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGTCTCTCCAAGACATACAGTACCGAGCTCCGGAAACGTGCGTGCACAG CGCTGTAGCGTCGCCGAGCTCGGTGGCGAGGCCAAACTATCACGACGCGC TCAGGAGGGTCGCGGTGGTGGTTTGCCAGCACATCAAGACGTGCGAGTGG AGACGTCGGGAGACGGAAGAGCGGGAGAAGTCAACGGGAGTGCAAATGCG GCAACGAGCTGAGTCGCGAGAAGTTCTACCTTCTATGACGAGAAACACCA GTGCGCTGTGGGGAAAGGCTGGAGAGAGAGACCTTGGGGAGGTACGGAGA ACGGCTTCGAGCAGCTGGGAAGACCAATGAATCGGGAGCCCTTCAATCTG CACAAGGTCGAGATGTTTCACGAGAAGCAGTTCGTGTCTTCTCAGTTCAG GTACAAATTCGTTCATGCGCCCGTCATGGCCTTGCCGGGAGCAGCGTTGA CCCTTCGTGAAGTTTGCACCGTGCCTTAATCACCCTCCGTCAACGAGATC TACGACTTCATCAAGACGCTCTTCAGCAAGGCCTGCCATAGCAGCGAGTG CTCTCTGGTGTGTCTGATCTACGTCGAGCGACTGATAGAGACGGCTCAGG CCCCATTGCTTGCGGTCACCTGGAAGCCTGTCTTGCTGTGCGGTCTCCGG CTAGCCTCCAAGATTTGGCAAGACCTGAGCAGCTGAAACGTGGAATTTTC CACGGTTTACCCGGAATTCTCTCTCAAGAGCATTAATCGACTAGAATTAC TGTTCCTCGGACAGATGAGATGGGACACGTCGATCTCGAGCAGCCTGTAC GCCAAGTACTACATCGCTCTGCGATCGCTCGCTGAAAAGAAGAACTTCAG ACGGCGGTACAACCAGGTCATGAAGATCGACGCGCCACGAGCCAACAGAG TGCAAGAGCGAGCGGATGCCGTGACCCACTCCGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig1962:2944..3878+

>mRNA_H-paniculata_contig1962.4984.1 ID=mRNA_H-paniculata_contig1962.4984.1|Name=mRNA_H-paniculata_contig1962.4984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig1962:2944..3878+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCAACGAGCTGAGTCGCGAGAAGTTCTACCTTCTATGACGAGAAA
CACCAGTGCGCTGTGGGGAAAGGCTGGAGAGAGAGACCTTGGGGAGATGC
GGCAACGAGCTGAGTCGCGAGAAGTTCTACCTTCTATGACGAGAAACACC
AGTGCGCTGTGGGGAAAGGCTGGAGAGAGAGACCTTGGGGAGCTGGGAAG
ACCAATGAATCGGGAGCCCTTCAATCTGCACAAGGTCGAGATGTTTCACG
AGAAGCAGTTCGTGTCTTCTCAGTTCAGGTACAAATTCGTTCATGCGCCC
GTCATGGCCTTGCCGGGAGCAGCGTTGACCCTTCGTGAAGTTTGCACCGT
GCCTTAACTGGGAAGACCAATGAATCGGGAGCCCTTCAATCTGCACAAGG
TCGAGATGTTTCACGAGAAGCAGTTCGTGTCTTCTCAGTTCAGGTACAAA
TTCGTTCATGCGCCCGTCATGGCCTTGCCGGGAGCAGCGTTGACCCTTCG
TGAAGTTTGCACCGTGCCTTAA
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