mRNA_H-paniculata_contig196.4970.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig196.4970.1
Unique NamemRNA_H-paniculata_contig196.4970.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig196.4970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig196contigH-paniculata_contig196:6342..17464 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-04_000420.1
Exons8
Model size1613
Cds size1608
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929485.6199503-CDS-H-paniculata_contig196:6341..64851622929485.6199503-CDS-H-paniculata_contig196:6341..6485Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 6342..6485 -
1691480882.278699-CDS-H-paniculata_contig196:6341..64851691480882.278699-CDS-H-paniculata_contig196:6341..6485Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 6342..6485 -
1622929485.639694-CDS-H-paniculata_contig196:7343..77281622929485.639694-CDS-H-paniculata_contig196:7343..7728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 7344..7728 -
1691480882.2875319-CDS-H-paniculata_contig196:7343..77281691480882.2875319-CDS-H-paniculata_contig196:7343..7728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 7344..7728 -
1622929485.6570377-CDS-H-paniculata_contig196:8368..84971622929485.6570377-CDS-H-paniculata_contig196:8368..8497Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 8369..8497 -
1691480882.2949452-CDS-H-paniculata_contig196:8368..84971691480882.2949452-CDS-H-paniculata_contig196:8368..8497Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 8369..8497 -
1622929485.679321-CDS-H-paniculata_contig196:9286..94441622929485.679321-CDS-H-paniculata_contig196:9286..9444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 9287..9444 -
1691480882.302684-CDS-H-paniculata_contig196:9286..94441691480882.302684-CDS-H-paniculata_contig196:9286..9444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 9287..9444 -
1622929485.6931412-CDS-H-paniculata_contig196:12016..121281622929485.6931412-CDS-H-paniculata_contig196:12016..12128Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 12017..12128 -
1691480882.3107278-CDS-H-paniculata_contig196:12016..121281691480882.3107278-CDS-H-paniculata_contig196:12016..12128Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 12017..12128 -
1622929485.7098784-CDS-H-paniculata_contig196:13440..136851622929485.7098784-CDS-H-paniculata_contig196:13440..13685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 13441..13685 -
1691480882.3183208-CDS-H-paniculata_contig196:13440..136851691480882.3183208-CDS-H-paniculata_contig196:13440..13685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 13441..13685 -
1622929485.7279024-CDS-H-paniculata_contig196:15554..157381622929485.7279024-CDS-H-paniculata_contig196:15554..15738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 15555..15738 -
1691480882.3261542-CDS-H-paniculata_contig196:15554..157381691480882.3261542-CDS-H-paniculata_contig196:15554..15738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 15555..15738 -
1622929485.7448218-CDS-H-paniculata_contig196:17208..174591622929485.7448218-CDS-H-paniculata_contig196:17208..17459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 17209..17459 -
1691480882.3338435-CDS-H-paniculata_contig196:17208..174591691480882.3338435-CDS-H-paniculata_contig196:17208..17459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig196 17209..17459 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929485.7616234-UTR-H-paniculata_contig196:17459..174641622929485.7616234-UTR-H-paniculata_contig196:17459..17464Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig196 17460..17464 -
1691480882.3474681-UTR-H-paniculata_contig196:17459..174641691480882.3474681-UTR-H-paniculata_contig196:17459..17464Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig196 17460..17464 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig196.4970.1prot_H-paniculata_contig196.4970.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig196 6342..17459 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig196.4970.1

>prot_H-paniculata_contig196.4970.1 ID=prot_H-paniculata_contig196.4970.1|Name=mRNA_H-paniculata_contig196.4970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=536bp
MKKQESHSLLTPKRARSSHSPTLHHTMDGEREGAEHKRRTSTSPCIPSPG
ISAEKLRHHLRHRGLVVAEDDIHEVLAKHSTVMEALTYLMENGKTRKSAL
RQRGRSETRRVIGARPPNFMSPPAPVPAQKRGRSLDAAVDAAGKESMQNK
AIGPASRSLCPRGGVTVPTATLVDGFPRPMKRQAKGEDRTMLIVGTVTTT
SSEGFPAGPGAHPAKESSAVSSSLTVSDVIADQPRPVQACALRPMQLESP
PRKVSATTAERVIKSSPPEPAPSIPAAVRSFPKLDRVIDMAQLDERVAKG
VSNWANLAIDAKHSIVRAIQHDLRLPPLRMKRLEHVERALSGLILAALDD
IAKSPSSHNSVQLFAKAIRKVRISIHETWLEVGGKYAHLYSTEEGTNSTL
ACKADAHGAGGGGGWSADSGGNGGDTNGDSLSSSGGNGLAGSEKTIKSLS
SACVGSDPQQQSATVVENCGDSGSGSGGGGGFLQGNQHATPSKALIRAAG
ANSPAKCPLSMSISVHPSRVLVQKPAMGTLELTPR*
back to top

mRNA from alignment at H-paniculata_contig196:6342..17464-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig196.4970.1 ID=mRNA_H-paniculata_contig196.4970.1|Name=mRNA_H-paniculata_contig196.4970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11123bp|location=Sequence derived from alignment at H-paniculata_contig196:6342..17464- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCCATGAAAAAGCAGGAGAGCCACAGCCTACTTACCCCTAAACGTGCT CGCAGCAGTCACAGTCCTACTCTGCACCACACCATGGACGGGGAGCGGGA AGGAGCTGAGCACAAGCGCCGTACTTCCACCAGCCCGTGTATACCCAGTC CTGGCATCAGTGCAGAGAAGTTGCGGCACCATCTGAGGCATAGGGGGCTC GTTGTGGCGGAAGATGATATCCACGAGGTCCTGGCAAAGCATTCTACCGT AATGGAGTGAGTCTGTAATGGTTGTTGGGTGGGTGTCTTATGTACCCTAC AAGGCTAATAGACAGTACAGTTGAAGTTTAGGGGACTCCGCTTGCGAAGG AAAGCACCACAGACAACGCATGTTAGACGTCACCTACAGCGCGTTGCTCG TGGTCAGATTTTATTGAGGCAATTAGGTAGCGCGCCACTGTCTGACTTTA TTTGTACTCCGAGCTTCTCCATTCGGATACTGCGGTACTGTACCCTCTTT GGTCTCTGTCACAATCTACTGGGTGTGGGTGAACACACTTATCAGTTCAG AGTTACACAGCACACGTCATCTCCCATTTGCTACCTTTACTGCATAAGAC ACGTGAATCACAGTTTACAATTCGTTTGTCTTACTGCATGTGAGGTACAA CGTACGTACCAAACACGCAAAAGATAATGTTAGTCTCGGATTTTTTTCCG GTTTTAGTCTCAAGTAACTTTTCTAAATGAATCTTCACGGTTATTGTGCC TGCATCGAGGCGCTACGAGCCACAATGAGCCGTTGTGAGTGGACCATCGG CTTTGTGCACAACATACCGATTGCACAGGCGTAGCCATGGCTGCTCCACT AGTGATACAAATTTGGATAATACCTCGTTACCCTTCTCTTGTACGATATA GGGTCGTTAGTCATTTCGCTTTCCAATAAATATCAAACCGTTTACCGCAG CGAGCGATACTATAGATCACAAGGCACGAACTGAGGCCTTAGACTTCTAG CCTATTGACCAGCGGGTTGCGTAGACCCCCGTCTGGAGTGACCACCAACG ACGGGTTGGTGAAATAATGTGAGTGTAAAAGATATAACAAACAACTGCGA TAACACCGCGATACTTGCCACCTTTATGGATCTTCTTGCTGTGATATTTA CGAGGGGGTTACATCGCCCTACACCAGCAGCTATGTTATTGTGCTACTGC AGCATTATGTGCGGCACTCTGTCATGCCGCAGCGCATCCATACTCTACAT ATCCCTCTCATTATTTACTGGTGAGGATGACTGTCTGATCACTATAGATT GCGCAGCTTAGAGATACAGGCTACAAAACCTCAGCACAAGCACAATATAC ATTTTGAGAAAATTCTAACCAAATCAACAAACACGTGAGACGTATTTCTA GGTTCCCACGTCACATGTGTTTGTCATGTCATTTTCTACAACACAGGATT GATACGAGTATGATCACTTAGAGCCCTTCATCAGTTTTTCAATGTCGTGA TCATGTGCGTTCTACATGTTGTTCAAAAGTCCTGTGACATTCTTCTCAAC GTCTACTCGAACCCATATTTTTGTTTGGCATAAAGTCAATACGCAACAAT GCGAGATTGGTTGCCACTCTCAAATCATACATCCTTGAGGTAAAGTTCGT TTTCTTTGCCCTGCCATGTTGGCGCAACGTTGTATCAGCACACCCTCCCG CCTTATTGATGATTTTTTACGCCCAGGGCCCTTACGTACCTGATGGAAAA TGGCAAAACGCGAAAGAGCGCGCTTCGTCAACGTGGACGCTCAGAAACTC GGAGGGTTATCGGCGCGCGACCCCCGAATTTTATGTCGCCGCCGGCGCCG GTACCCGCACAAAAGAGAGGACGTTCACTAGACGCTGCTGTCGACGCTGC TGGGAAAGAGGTGAGCCGCAAGCACTTATCGGGTATCGTGTTGAATTGGG CAAGATCCACGTATCGTTTATTGGAAGTCGATGCCAATAGGATCATTTTA TTGAAAGTGTGGTTCGAGTTGACCTGGAAGAAAATGAAAACACACCTATG CGTCTAACGGACAGTTCAGGTTACGGTGTCTGTATCCTTGCTGATGACGT TGGTTGTGTAAGTTTATCCTGATATATCGAGGGGTGTTTACGCTAAGTTT TCTTGAACAATGACCGAACGGTTCGGTAGCACGAACGGAGTTGAAGATGG CGGGATTCCCGATAGAATATACAGGCCATCATCCGCGGACGGCTGGTATT TGCAAATCATGGCTGTAGCACGGAATTGAACGGTTTGGTAACGACTAGTC ATAGTAACTGTACGGTACGGTAATCGCTGACTGCGCTGTGTTCATGGTAT AGTACAGTAACAGTCTTGCATGATCAAAGAAATCGCGAGACGGAAGACGC CATACCACTGTAAAACGTGCAGTATTTGATTCTAACATAGCGGCCCGATC ATATGTATACGATGTGAGTAAATGGATTTCGTGCAAACATTCCTCGTTGC AGGTTCTCGTTAACGTACCTCTCCGAGTACATAATGGGTAAACACCCAAT GTGATTATGGCATAATTGTTAAAACAGAGAAAAGCCAGCAAAAGAACACT GAAAACAAGAATAATTTGTGCTTCGGGCAGCACTATTTTTTCGTATCACC GTTTTTACGAAGTGCACAAACCAATTGCCCAGACTTGCAAGTCACAAACA TGTGTTACGATTTCCGCTCTTATACTGGTTCACATTTTCTCGTGGCATTT CACATGACGAACCATTAACCTGTTTGTGGACTTGGTCACGTAAAAGAAGA GACATCTACTGCCGATTATGTGAAAAACTCTTGGTTATTATAGGTGAATT GAATCATTTTTTACCTCACATGTTATAGGTGCATCCATGTCGGTTTGAAC GTTACTGATTGCATTGTACAGTACTTGTATCGTAGGGTATGCAAGTTCCA CGGTACGGAGGGTACCCATTTTTGCGTTTTATCGCGGTAGAACCGAGGTA TATTGTTTCTTTTCGGGTGTGCAATTTAGAGTCTTCCTGGAGCGTGTTTG ACCGATTCCCACAGGTTGTTCTTGTAGTTGCAATACACCGGATAAGGGGA AAACTGGGCGAGCACCGATCTTTGATCCAGGAGATTCCAAGACGTATGCG GCATTGAATTGATGTCATGGGGTCGAGAGTGACTCGAAACGGCGAAGACC GCTGTACATGGAATAAGGAACATCTGTTATGAGCCACCTTGGAGATGAAG AAGAGGTATCTGTAAAGAGGGCAGGGAACACCTTTCGTTAGTCATTGACC GTCGGCGATCGCTCTCAGTGGAAACAGCGCCCCGTTCTCTACGAATAGCT GGCGTGTAGTGAATGACAAAGGGAATCAGGTGCAGAAAATACGACTATCC CCCCCCCCCGTCTTTACCGTTATCTTATAGCGGTTGTTGGTGCTAATGCG TACATGCAATTAGTCTATAAAGCACAATATCTGTAACAAAAAAACGGGAC AAAATAAATAATATATCAAATATAGCATGAAAAAAAATGGAAATCCTGTC GATAGAAACAATGACTGTTGTATAAGGATGTTGTTGTCGTTGTCGTTGTC GTTGTCGTTGTTGTTGTTGTTGATCCTGTCTCGTTTTGGCTGGACATGAA CTGTCAAGGGCGTTATTCACTACACTTCCACACACAACTGACTGATACAG TTCAGCTATTATTCTTGTCATAAACACGAGTAAACCCTCTCCCTTTCCCG TTCCCCCGTTTTGGTATCTATGTTATCAGTCAATGCAAAACAAGGCAATT GGGCCAGCTTCAAGAAGTCTTTGCCCCAGAGGTGGTGTCACCGTACCTAC AGCGACGCTGGTCGACGGCTTCCCCCGACCTATGAAGCGTCAAGCTAAGG GAGAAGACCGGACGATGCTAATCGTAGGAACAGTTACCACTACGAGTAGC GAGGGTTTCCCCGCTGGCCCTGGGGCGCATCCGGCGAAGGAAAGTAGTGC GGTGTCCTCAAGTCTGACCGTCAGGTTTGTTATGTTGTACGATAAAAACA ATGTATTCTCGGAATATTTTTAATACTTGATTCAAGTGATTTTTGTTTTG GCTCGAGGTGGTTTTGCGGCGGCCTTCGGGGGGGATTTATTCCGGGCTCC GTGTATCTGATCACTGTGTTTGTTCTTCGGCGATGATAAAATTCTGGGGA AAATATTTATGTGAGTAGTAACAGTGTAAGGGTTACATCCCCCAGACGAA TACCAATACTTGGGATGGCTTCGACAAATATTCTCAAGTATTCGCCTGAA GGCTCAGCATGATCTGGACCATTATACGACGGTAGCGAATACTGCCAGCA ACTTAGACATAGTAGCCATGTGAAGCTTTGTATTTGTCCGGGGAGTGCAC CGCCTCCGTTCAGGTAACACCCGAGATGTTATCAAGATGTCACGTCAACC TTTCGCACGTATTGTCATTATACATCCGGTTCAGCAAGTAGTGAAGTTCA TTTGCCTGGTACCTGTACGTATAAACCGTTTCGGATTGTCGAATTGAAGA TGCACACAGACAAAATCATTTTCTTCTTTTGGGATCATTTTTTCGACTCT GTACTCGAGTACCTTCGTCAAAACGAGTCTTGACTCTCAGAGCTGCCCTC GGTGGGGTCGACGAGTATACGCGATTTGCACGGGCATAGCCGTGGATCTG TTAAAAAAAACTGTCAACATACAATGCTTTGTCATGGTCTTTCTTTCTCT GTTTATTCTAAACATCTGCTGCTATTTTTCATGTTTTTGCTTCGTTGTCT TCTGTCCGCTGGGAGCATAGCGGAGTTCCGTCGACTCGAACGGCGGTCGT CCGTGGCCCATATCGATAATTGGCTAAATGCCTTCCTACTATTGGAAATA GCTTCGTGAATTAGCCTCTTTCACATCAAATATTTGTATTTATCGATGGC AATTGTGAACTGTGCCCCCTGCGAATAAATATCAGACAGAAACAAATACT TGCGAGTACTTGCCACTAAAATTCGAAAGTATTCACACAGATTAACCTCT TGATTCCATCTATTCCTTTTCCTATTCAAGTAGTAAGTAGAGCAATCAGT TGTAGATGGTCCAGAGCACATAGGATGAACGTGCTCATGCTGAACCTTTA GGAAATACTGGAAAAACAAATAAGCAAGCAAACAGGCTAACACCTCAAGT ATTTGTATTTATCCGGGGGGGGGGCAATGGTTGCAATTGTGTTTCATCTG ATTGATACATACCAACAGCTGAAGGTCATAAAGTCACCAAGATTCCTTAC GTTTTTTGTCATTTTCCGACGGCTCCGCCTTTGTAGTGACGTCATCGCGG ACCAGCCGAGGCCTGTACAGGCTTGTGCCCTTCGCCCGATGCAGCTCGAG TCTCCCCCACGCAAGGTCTCTGCTACCACCGCGGAGAGAGTTATCAAGGT ATGATGCCGCTTTCTAGCTGAGATAGCCACGTCTATACAGTATGCCCGTG CTACACGTTTTAGCACCGTGCCCGTCTAGACAGGACCCATTGTCCTTGCG CAGCTGATTGTTACGCTCGCCGCCTGAAAGCCAAATCCTCTCGCCTGAAC AAAGTATGCCAAATTGAACACATATATATATATATAGAAGGTTTAGAAGG GTGTTCTGCTCTGAGTAGATTTTCTCACAACGATTGACACCTATGTTCTG TTGCTGACAGATGTTCTAGAAGGTGTTTCTGTCCGGCAGGTGAATCATAT ACATTCGCTCACAAGTGTTTCGGAAAGCTTGAGGTTTTCTCGGATACTTA GACAAACCACTTGTTATGGCAGGGTTTTTCCCAGATTTTTTTTGTTTCTG TCCATTTTCGCCTCGAAAAAAAATCTGTCAACAAGCTATCGAGAGATTTG TACGACAGAATGTGACCCCCACTCTCTCCAGACCTAGTCAAACGGCCCAG ACAAGCGCAACTTTGACCCACTTTTACGTGCTTCTTTTCGGCGACAAAAT TCCTAAACCTATGTATATATATATATATATATATATATATATATTATGTT TCTTCTGCAGGGTTTGCTGCACGCATGCGGAGGGTCCCATGATCGCGATG ATAGCCAATTGACACACGCCATGCAGCACGACCTCACACATCTTTCACGC ACAAAAAAGGATACTTTCTGTCATATATCATACATTGACGCCGACATAGC CAAGCTAGACACATGATGCCGATGCGATAGCCACGGGATTGCAGCTTTCC AGGACCATCTAGAGTCCCCTTCGCTGGACAGCGATGGCGACCTTCAGCTG CGGCTGCAAGGCTGTCCCGTGTTGCCGCCGTTGTCATGGATGACGATGGT TGTCATGGGTGATGATGGTTGTCATGGGTGACGATTTCTACAATGATAAA AATCCGCAATCCATCCCGCCTGCACCTCCAAGCAAGCTTCGCGAAACCGG CTGATGACATACAGCATGCGTATGTGGTGATTGATCTGGAGAACGACAAG CCTACTAGGTCAAAGCCCACCCGCAACACGAGTAAAGAAGGGTTGGCACA CGTGGGCACCTCATCGTGGTAGAAATTGCATGACAGTCGAATGTATATCT TCCCATGTTCTGGGCTCGGTCACAACTTACACATAGAACCTTTTAGTGTG TTTTTTTCTCAACCAAAAGTGACGATCAAGAAAAATAAATAAATATTTGT ATATATATATATCGAACAATAACTCCTGCCAAAGAAAAGAAAGAGCTATT TGTATTATAGCAGGCGATATCATATACCGAAATCATGAGGCCTGTACCAA AATAACAAGGAGCATTCAACGACATAATCAGTAGATGTCCAATCTCTCAA TTTCATCACCGCCTACAATACCCCCCCTCCTCCTCCCCACTTTTTTAATA TAACTTTTCCAATAAGGGTATACAAGTGACATGATATCATTATGGGCACG ATGGAGTAATTATGTGAGCGCCACAGATGTACTAACTGCGGCAAGTGGGT TGACTCCTTAATGAGGCTTTCGATGGGTGACTGGGATATTTGATCTCGGT CATGCGTTCACATGGAAGCCAATTTATGTTCGTGTACAGTACACACGCGA GTGATACATGATACTACCTTGTGACCCCCCCCGCTTGCTCCCACCCTCCT TTGTTCGAGCTTGAATGGATGTTTGGTTTCTCCGTCGTTACTGCAGTGAA GCTCTCCTCACTTACAGGCAGCCCCCATCGCATCATTTGCGTCTGTTTGC TACGGAAGACTGATTTAGAAAGTGTCTCCGCGAGTTTTCTAATAATGCCC AGGTTATGGTATGTCCCTGTACGTGCCCCCCGTCGGTGATTGTCTCATGT ACACATCTCAGAGCCGCGGTCAATGGCCTCAGATATGTGATACTAGTGCC GTAATATACGCGTTACATGGCTCACTTAGATGAGTAATGGTGATATTATA TACTGCAGGGGGTTTCTAGTAAGTATTCATGCTTGAAAGCGGAGATACTA GATCCGGTGTTTACTCGTTCTTGCCCTACATTAAATCGAAGATGAAGATT CTAGAACGACAAAAAAGAACTCTCTTTGCACCTGAGATGATGCACTAACG AGCTGTCCAGAGCTGGTTGGGCATTATGTCTATGTAGTCGTCAATATTTA CGACTGGTCGTTAGCAAATCTGTGTTTGAGCTGTTACGAAGTCTGGTTCT CAAAGGGTAATTATAACAGTAATAGTAACAATAACAATAACAATAACAGT AACAATAACAATAACATTACAGTAACAGTAACAGTAACAGTAACAGTAAC AATAACAATAACAATAACAGTAACAGTAACAATAACAATAACAATAACGA CCATGGCGTGCGAAACATGAGTACGCCCTCCCCCCTATATTTTCGTCTAT TCGTCTATTCGTCTCTACAATTAACTTTGTGATCGTCACGTGTTTGTTCG TTACTTTGCCTTGTCTCACCTGTCTTGCCTCTGTGCGTCTTGGTCGTTCT TCGGGGTACGTCGAAAGCAGAGCTCTCCTCCTGAGCCCGCTCCAAGTATC CCCGCTGCAGTGAGGTCATTTCCGAAGCTAGACAGGGTGATCGACATGGC TCAGTTGGACGAGAGGGTTGCAAAGGGTGTGTCAAATTGGGCTAACTTGG CAATCGACGCGAAGCACAGTATTGTCAGGTGTGATAAGAGTATGTAACAA CGGAATTATTGCCACGGCGGCTACACTTGTGATGACCTTGATTTTTTACT TCAATCCGTCGATAAATAACGGATCGCAGAATTCGCAGTGGCTCGCTATA CTTACAAGATTTTTTTATCAAGGGTTGAAATTGAGCGTCATCACCACTTT CACGTATTTTTACCTGGGAAAGAAACAAAAAAGGTTGACTGATTGATGAT CATGAGCAACTCAACAAAAAGCACAGTAATACGTTCGTTTAGCTGCAAAC TCAAACGCCGACGCAGCGTAATCAATTTGATCATCCATGCGGACAAAAAA GATCGACAGCCTGCACAATCAAGGGATGGTAGGAGGATCTCTTTCGCAAA GGAATGGATGTCTTGGCGTTCCGGAAATGCGTTGTTGGGGTAATATAGAT GTATTAACGCTTCAGACCAATGGCTAGTGGTGCTTGTATACTGGAGGATA TGGATGCTGTAAATCGAAATACCTTGGGGTTCAGGAGTATGATCGGATTT TGCTTTTTGTGTGATCTTTGAGGGCGTTCATGCTCTTGCTTGACTGCACT GCCGGCTTTTGCTACTACTAGGTGTTGACTTTTATTTATGTGTTTGTCTG CCTCTGTATCTGTGTCCGTGTGTCTATGTCTGTCTATCTCTCTTTGTCTG TCTATCTCTCTCTGTCTGTCCATCTCTCTCTGTCTGTCTATCTCTCTCTG TCTATCTATCTGTCGCTGTCTCTCTCCTTCGGTCTCTTTCTTTCCCTCCT CTTCCTCTTCCTCTCAGAGCTATTCAACACGATCTTCGCTTGCCCCCATT GCGGATGAAACGGCTCGAGCACGTGGAGCGTGCGCTATCGGGGCTCATCC TCGCGGCGCTGGACGACATCGCGAAATCGCCGTCATCGCACAACAGGTGT GTTTAATATGTGTGTTTGAGTAGGGAAGAGAGGGAGACGAAAGCGGGCAG TATCGTACAAGGACCTACCAAGACCGACCACGGAGGAACCAACAAGTAGG AGTAAAGGAATTTTCGGGAGATACCCTTGTTATAACGTAGGTCGTCATCC AATGTTAATATTTAGGATTAGGGTTTGTATTCAATTATCATTTGCACCTG ATTTTTTGCCCGAGATTTGGCTTTGAATTGATCGATAAATTCACCACTTC GACGGGCAAATAAGTAGATTTTCTCGTGAGGAATTAATTATACCTGGTCT CTCTCTCTCTCTCTCTCTCTGTCTGTCTCTCGAGATATTGCTGGCATACA TCGAGCAGGAGGTTTACTCGTGCCGACGTCAACCTCTCTCATCTTACGAT TGACAAAATTACGTACGACGATGGCAAGATGCGAACCCAAACCACAAGCC ATCAAAAGAAGCAAGAGCAGACATGTACAGCCCATCACAAGAAGCAAGAA CATCAAGGAAGGCAAAGAGACTAAAATGAACATAGATGCAATATTTATCA ACAAAGGTCCCCAACCTCCTCCGAACCCTTATCCCCCTAACCCCTCCCCC ACCGTCCACTTCGCCTCCCCCTTCCCCCTGCCGCAGCGTTCAGCTGTTCG CCAAGGCCATCCGCAAGGTGCGCATCTCCATCCACGAGACCTGGCTCGAA GTGGGCGGGAAGTATGCGCACCTATACTCCACGGAGGAGGGCACAAATTC GACTCTAGCGTGTAAAGCTGACGCACATGGGGCGGGGGGTGGCGGAGGCT GGAGCGCTGACAGCGGTGGTAATGGTGGTGATACAAACGGCGACAGCTTG TCGAGTAGCGGTGGCAACGGGTTGGCGGGAAGCGAGAAAACCATTAAAAG TCTTTCGTCTGCATGTGTTGGTAGCGACCCCCAGCAGCAAAGCGCAACGG TAGTGGAAAACTGCGGTGATAGTGGCAGCGGCAGCGGCGGCGGCGGCGGC TTCTTACAGGGAAATCAGCACGTGAGGAGGGCAGAACCATTTTTGGGGTG ATGTGATGAGTTGGTTGATCTATCGCGCCGTATGTGTGTGGCTCGGTACT CTGCTGTGCTGTAGCGGTGTTGTGTTGGGTGGGGATATCATGTATATGTA TGTGTGTATATATATATATATATATATGTGTGTGCTTTGTGTATTGTATC GTAAAATAACTACGTTATATAGAGTAGGACGGGTGGATCTTGGGCAGGTC ATACTCCAAAATTTTTCCACAGACTTTACTGTTGCCGTATAAAATTAACA AGGATCATTTGCGATAAAGGGTTTCCGAGAAAGAAACGACCTCCGTTTCC CATGGATAAACGCAACAAGCGTTGTGTTCAACGGTGCCCGGTTATCACAA ATATTCTAGTACTAGTAGTGTCAATACCTCCCTTATTCCATTTGTCTGAA TGTCGTCACTCACTTCAGCGTGTGCTCTATATACCCCTGCAACGCTCAAA CCTTGGCCGGTGATTGGGAGCGTTCCGATTGGGGCAAATTGTATCATGTG CCGTTTTACCGCAGCACAATAAACCTTAGTAATACGGTCGCGTCTCATAT TGTCATACTCCACTACATTTTCCAAAAACTGATTTACGGAAAAAGGTGTC ACATGCAGTATACCGCAGCACACCAAACCTTCGTATTTAGGTCGTGTCTC ATATTTTGTCATACTTCACTACGTTTTCCCAAAAATTGCTCACCAGCAGG GTAAAATTCTTGCTTTCTGGAGCACACTAAACCCTAGTCATTAGGTCATG TCCCACGTATTGTCACGCTCCACTGCGAATTCTCGAAAGTTGCTTACCCG GTGATAACTTACCTGCCCTTGAATTTTAGGCAACACCTTCAAAGGCTCTC ATTCGGGCAGCGGGGGCAAACTCACCAGCTAAATGTCCCTTGTCGATGAG CATTTCCGTGCACCCCTCTAGGGTGCTCGTGCAGAAGCCTGCAATGGGTA CGCTTGAGTTGACTCCCAGGTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig196:6342..17464-

>mRNA_H-paniculata_contig196.4970.1 ID=mRNA_H-paniculata_contig196.4970.1|Name=mRNA_H-paniculata_contig196.4970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3216bp|location=Sequence derived from alignment at H-paniculata_contig196:6342..17464- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAAGCAGGAGAGCCACAGCCTACTTACCCCTAAACGTGCTCGCAG
CAGTCACAGTCCTACTCTGCACCACACCATGGACGGGGAGCGGGAAGGAG
CTGAGCACAAGCGCCGTACTTCCACCAGCCCGTGTATACCCAGTCCTGGC
ATCAGTGCAGAGAAGTTGCGGCACCATCTGAGGCATAGGGGGCTCGTTGT
GGCGGAAGATGATATCCACGAGGTCCTGGCAAAGCATTCTACCGTAATGG
AATGAAAAAGCAGGAGAGCCACAGCCTACTTACCCCTAAACGTGCTCGCA
GCAGTCACAGTCCTACTCTGCACCACACCATGGACGGGGAGCGGGAAGGA
GCTGAGCACAAGCGCCGTACTTCCACCAGCCCGTGTATACCCAGTCCTGG
CATCAGTGCAGAGAAGTTGCGGCACCATCTGAGGCATAGGGGGCTCGTTG
TGGCGGAAGATGATATCCACGAGGTCCTGGCAAAGCATTCTACCGTAATG
GAGGCCCTTACGTACCTGATGGAAAATGGCAAAACGCGAAAGAGCGCGCT
TCGTCAACGTGGACGCTCAGAAACTCGGAGGGTTATCGGCGCGCGACCCC
CGAATTTTATGTCGCCGCCGGCGCCGGTACCCGCACAAAAGAGAGGACGT
TCACTAGACGCTGCTGTCGACGCTGCTGGGAAAGAGGGCCCTTACGTACC
TGATGGAAAATGGCAAAACGCGAAAGAGCGCGCTTCGTCAACGTGGACGC
TCAGAAACTCGGAGGGTTATCGGCGCGCGACCCCCGAATTTTATGTCGCC
GCCGGCGCCGGTACCCGCACAAAAGAGAGGACGTTCACTAGACGCTGCTG
TCGACGCTGCTGGGAAAGAGTCAATGCAAAACAAGGCAATTGGGCCAGCT
TCAAGAAGTCTTTGCCCCAGAGGTGGTGTCACCGTACCTACAGCGACGCT
GGTCGACGGCTTCCCCCGACCTATGAAGCGTCAAGCTAAGGGAGAAGACC
GGACGATGCTAATCGTAGGAACAGTTACCACTACGAGTAGCGAGGGTTTC
CCCGCTGGCCCTGGGGCGCATCCGGCGAAGGAAAGTAGTGCGGTGTCCTC
AAGTCTGACCGTCAGTCAATGCAAAACAAGGCAATTGGGCCAGCTTCAAG
AAGTCTTTGCCCCAGAGGTGGTGTCACCGTACCTACAGCGACGCTGGTCG
ACGGCTTCCCCCGACCTATGAAGCGTCAAGCTAAGGGAGAAGACCGGACG
ATGCTAATCGTAGGAACAGTTACCACTACGAGTAGCGAGGGTTTCCCCGC
TGGCCCTGGGGCGCATCCGGCGAAGGAAAGTAGTGCGGTGTCCTCAAGTC
TGACCGTCAGTGACGTCATCGCGGACCAGCCGAGGCCTGTACAGGCTTGT
GCCCTTCGCCCGATGCAGCTCGAGTCTCCCCCACGCAAGGTCTCTGCTAC
CACCGCGGAGAGAGTTATCAAGTGACGTCATCGCGGACCAGCCGAGGCCT
GTACAGGCTTGTGCCCTTCGCCCGATGCAGCTCGAGTCTCCCCCACGCAA
GGTCTCTGCTACCACCGCGGAGAGAGTTATCAAGAGCTCTCCTCCTGAGC
CCGCTCCAAGTATCCCCGCTGCAGTGAGGTCATTTCCGAAGCTAGACAGG
GTGATCGACATGGCTCAGTTGGACGAGAGGGTTGCAAAGGGTGTGTCAAA
TTGGGCTAACTTGGCAATCGACGCGAAGCACAGTATTGTCAGAGCTCTCC
TCCTGAGCCCGCTCCAAGTATCCCCGCTGCAGTGAGGTCATTTCCGAAGC
TAGACAGGGTGATCGACATGGCTCAGTTGGACGAGAGGGTTGCAAAGGGT
GTGTCAAATTGGGCTAACTTGGCAATCGACGCGAAGCACAGTATTGTCAG
AGCTATTCAACACGATCTTCGCTTGCCCCCATTGCGGATGAAACGGCTCG
AGCACGTGGAGCGTGCGCTATCGGGGCTCATCCTCGCGGCGCTGGACGAC
ATCGCGAAATCGCCGTCATCGCACAACAGAGCTATTCAACACGATCTTCG
CTTGCCCCCATTGCGGATGAAACGGCTCGAGCACGTGGAGCGTGCGCTAT
CGGGGCTCATCCTCGCGGCGCTGGACGACATCGCGAAATCGCCGTCATCG
CACAACAGCGTTCAGCTGTTCGCCAAGGCCATCCGCAAGGTGCGCATCTC
CATCCACGAGACCTGGCTCGAAGTGGGCGGGAAGTATGCGCACCTATACT
CCACGGAGGAGGGCACAAATTCGACTCTAGCGTGTAAAGCTGACGCACAT
GGGGCGGGGGGTGGCGGAGGCTGGAGCGCTGACAGCGGTGGTAATGGTGG
TGATACAAACGGCGACAGCTTGTCGAGTAGCGGTGGCAACGGGTTGGCGG
GAAGCGAGAAAACCATTAAAAGTCTTTCGTCTGCATGTGTTGGTAGCGAC
CCCCAGCAGCAAAGCGCAACGGTAGTGGAAAACTGCGGTGATAGTGGCAG
CGGCAGCGGCGGCGGCGGCGGCTTCTTACAGGGAAATCAGCACCGTTCAG
CTGTTCGCCAAGGCCATCCGCAAGGTGCGCATCTCCATCCACGAGACCTG
GCTCGAAGTGGGCGGGAAGTATGCGCACCTATACTCCACGGAGGAGGGCA
CAAATTCGACTCTAGCGTGTAAAGCTGACGCACATGGGGCGGGGGGTGGC
GGAGGCTGGAGCGCTGACAGCGGTGGTAATGGTGGTGATACAAACGGCGA
CAGCTTGTCGAGTAGCGGTGGCAACGGGTTGGCGGGAAGCGAGAAAACCA
TTAAAAGTCTTTCGTCTGCATGTGTTGGTAGCGACCCCCAGCAGCAAAGC
GCAACGGTAGTGGAAAACTGCGGTGATAGTGGCAGCGGCAGCGGCGGCGG
CGGCGGCTTCTTACAGGGAAATCAGCACGCAACACCTTCAAAGGCTCTCA
TTCGGGCAGCGGGGGCAAACTCACCAGCTAAATGTCCCTTGTCGATGAGC
ATTTCCGTGCACCCCTCTAGGGTGCTCGTGCAGAAGCCTGCAATGGGTAC
GCTTGAGTTGACTCCCAGGTGAGCAACACCTTCAAAGGCTCTCATTCGGG
CAGCGGGGGCAAACTCACCAGCTAAATGTCCCTTGTCGATGAGCATTTCC
GTGCACCCCTCTAGGGTGCTCGTGCAGAAGCCTGCAATGGGTACGCTTGA
GTTGACTCCCAGGTGA
back to top