mRNA_H-paniculata_contig19590.4969.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A6H5KW34_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW34_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.410e-117 Identity = 180/197 (91.37%), Postives = 189/197 (95.94%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIK 591
ARALANAC+K+GHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIV+GATNRPDSLDPALRRPGRFDRELAFPLPTRRARR+ILRVHTKDWKPPM LE+ELAE +AGYCGADMKALCSEA LLAVRRRYPQI+ S+EKLLLD K +K
Sbjct: 298 ARALANACSKSGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVVGATNRPDSLDPALRRPGRFDRELAFPLPTRRARRDILRVHTKDWKPPMDPALEDELAELTAGYCGADMKALCSEATLLAVRRRYPQIYASEEKLLLDAKSVK 494
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: D8LBU3_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU3_ECTSI) HSP 1 Score: 363 bits (931), Expect = 3.840e-113 Identity = 181/199 (90.95%), Postives = 190/199 (95.48%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALANAC+K+GHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIV+GATNRPDSLDPALRRPGRFDRELAFPLPTRRARR+ILRVHTKDWKPPM LE+ELAE +AGYCGADMKALCSEA LLAVRRRYPQI+ S EKLLLD K +KV+
Sbjct: 226 ARALANACSKSGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVVGATNRPDSLDPALRRPGRFDRELAFPLPTRRARRDILRVHTKDWKPPMDPALEDELAELTAGYCGADMKALCSEATLLAVRRRYPQIYASKEKLLLDAKSVKVT 424
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A7L2IT14_9PICI (ATAD2 protein (Fragment) n=1 Tax=Semnornis frantzii TaxID=91796 RepID=A0A7L2IT14_9PICI) HSP 1 Score: 291 bits (745), Expect = 3.930e-96 Identity = 141/199 (70.85%), Postives = 170/199 (85.43%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALAN C++ RISFFMRKGADCLSKWVGE+ERQLRLLF+QA R +PSIIFFDEIDGLAPVRS KQDQIH+S+VSTLLALMDGLDSRG+V++IGATNR DS+DPALRRPGRFDRE F LP + AR+EI ++HT+DW P + +E+AE+ GYCGAD+K+LC+EA L A+RRRYPQI+ES++KL LD IK++
Sbjct: 54 ARALANECSQGDRRISFFMRKGADCLSKWVGESERQLRLLFDQAYRMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDSRGEVVIIGATNRLDSIDPALRRPGRFDREFLFNLPNKEARKEIFKIHTRDWTPRLLDMFLDEVAEECVGYCGADIKSLCAEAALCALRRRYPQIYESNKKLQLDTASIKIT 252
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A7R9VMJ7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VMJ7_9CHLO) HSP 1 Score: 288 bits (737), Expect = 1.180e-94 Identity = 147/199 (73.87%), Postives = 166/199 (83.42%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALA +K G R+SFFMRKGAD LSKWVGEAERQLRLLFE+ARRH PSIIFFDEIDGLAPVRS KQDQIH S+VSTLLALMDGLDSRGQV++IGATNR D+LD ALRRPGRFDREL FPLP ARR IL +HT W P S L +ELA + GYCGAD+KALC+EA + A+RRRYPQI+ESD+KL++D K + VS
Sbjct: 53 ARALAAHASKFGTRVSFFMRKGADILSKWVGEAERQLRLLFEEARRHAPSIIFFDEIDGLAPVRSSKQDQIHNSIVSTLLALMDGLDSRGQVVIIGATNRIDALDGALRRPGRFDRELLFPLPGLAARRSILGIHTCKWAAPPSGALMDELASIAVGYCGADLKALCAEASMQALRRRYPQIYESDQKLVVDPKEVSVS 251
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A0S7LKQ5_9TELE (ATAD2 (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LKQ5_9TELE) HSP 1 Score: 288 bits (738), Expect = 2.600e-94 Identity = 140/198 (70.71%), Postives = 166/198 (83.84%), Query Frame = 1
Query: 4 RALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
RAL N C++ +++FFMRKGADCLSKWVGE+ERQLRLLF+QA + +PSIIFFDEIDGLAPVRS +QDQIH+S+VSTLLALMDGLDSRG+V+VIGATNR DS+DPALRRPGRFDRE F LP R ARREIL++HT+ W PP S ELAEK GYCGAD+KA+CSEA L A+RRRYPQI+ S +KL+LD I ++
Sbjct: 1 RALVNECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGATNRLDSIDPALRRPGRFDREFLFGLPDREARREILKIHTRQWSPPPSEAFLEELAEKCVGYCGADIKAVCSEAALCALRRRYPQIYSSSQKLVLDVNSIVIA 198
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A1X7T5I1_AMPQE (AAA domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T5I1_AMPQE) HSP 1 Score: 289 bits (739), Expect = 8.670e-94 Identity = 136/199 (68.34%), Postives = 168/199 (84.42%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALAN C+K G +++FFMRKGADCLSKWVGE+ERQLRLLF+QA + +PSIIFFDEIDGLAPVRS +QDQIH+S+VSTLLALMDGLDSRG+++VIGATNR D++DPALRRPGRFDRE FPLP+R R IL++HT W PP+ + ELA+++ GYCGAD+K+LC+EA L ++R YPQI+ S EKLL+D IK+S
Sbjct: 99 ARALANECSKEGRKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSTRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRIDAIDPALRRPGRFDREFRFPLPSREDRLSILQIHTHHWSPPLKLSFLQELADQTVGYCGADLKSLCTEAALHSLRSHYPQIYNSSEKLLIDTSTIKLS 297
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: H9FJE4_MACMU (ATPase family AAA domain-containing protein 2B isoform 1 (Fragment) n=1 Tax=Macaca mulatta TaxID=9544 RepID=H9FJE4_MACMU) HSP 1 Score: 284 bits (727), Expect = 1.180e-93 Identity = 138/199 (69.35%), Postives = 167/199 (83.92%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALAN C++ +++FFMRKGADCLSKWVGE+ERQLRLLF+QA +PSIIFFDEIDGLAPVRS +QDQIH+S+VSTLLALMDGLD+RG+++VIGATNR DS+DPALRRPGRFDRE F LP ++AR+ IL++HT+DW P +S ELAEK GYCGAD+KALC+EA L+A+RRRYPQI+ S KL LD I +S
Sbjct: 67 ARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLDVSSIVLS 265
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A7K9SS33_9AVES (ATAD2 protein (Fragment) n=1 Tax=Galbula dea TaxID=1109041 RepID=A0A7K9SS33_9AVES) HSP 1 Score: 292 bits (747), Expect = 1.700e-93 Identity = 141/198 (71.21%), Postives = 169/198 (85.35%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKV 594
ARALAN C++ RI+FFMRKG+DCLSKWVGE+ERQLRLLF+QA + +PSIIFFDEIDGLAPVRS KQDQIH+SVVSTLLALMDGLD+RG+V+VIGATNRPDS+DPALRRPGRFDRE F LP + AR+EI ++HT+DW P +S ELAEK GYCGAD+K+LC+EA L A+RRRYPQI++S +KL +D IK+
Sbjct: 78 ARALANECSQGERRIAFFMRKGSDCLSKWVGESERQLRLLFDQAYQLRPSIIFFDEIDGLAPVRSSKQDQIHSSVVSTLLALMDGLDNRGEVVVIGATNRPDSIDPALRRPGRFDREFLFNLPNKEARKEIFKIHTRDWTPKLSDAFLEELAEKCVGYCGADIKSLCTEAALCALRRRYPQIYQSSQKLQIDVDSIKI 275
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A7L2HAL0_SAGSE (ATAD2 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L2HAL0_SAGSE) HSP 1 Score: 285 bits (729), Expect = 2.270e-93 Identity = 139/199 (69.85%), Postives = 165/199 (82.91%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKPPMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALAN C++ RI+FFMRKGADCLSKWVGE+ERQLRLLF+QA + +PSIIFFDEIDGLAPVRS KQDQIH+S+VSTLLALMDGLD RG+++VIGATNR DS+DPALRRPGRFDRE F LP + AR EI ++HT++W P ELAEK GYCGAD+K+LC+EA L A+RRRYPQI++S EKL LD IK++
Sbjct: 78 ARALANECSQGDRRIAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDGRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPNKEAREEIFKIHTRNWTPKPLDRFLEELAEKCVGYCGADIKSLCAEAALCALRRRYPQIYKSSEKLQLDIASIKIT 276
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Match: A0A7L3X6M5_9AVES (ATAD2 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L3X6M5_9AVES) HSP 1 Score: 291 bits (746), Expect = 2.530e-93 Identity = 145/200 (72.50%), Postives = 172/200 (86.00%), Query Frame = 1
Query: 1 ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSIIFFDEIDGLAPVRSVKQDQIHASVVSTLLALMDGLDSRGQVIVIGATNRPDSLDPALRRPGRFDRELAFPLPTRRARREILRVHTKDWKP-PMSVELENELAEKSAGYCGADMKALCSEARLLAVRRRYPQIFESDEKLLLDNKGIKVS 597
ARALAN C++ RI+FFMRKGADCLSKWVGE+ERQLRLLF+QA + +PSIIFFDEIDGLAPVRS KQDQIH+S+VSTLLALMDGLDSRG+++VIGATNR DS+DPALRRPGRFDRE F LP + AR+EI ++HT+DW P P+ V LE ELAEK GYCGAD+K+LC+EA L A+RRRYPQI++S EKL LD IK++
Sbjct: 78 ARALANECSQGDRRIAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPNKEARKEIFKIHTRDWTPKPLDVFLE-ELAEKCVGYCGADIKSLCAEAALCALRRRYPQIYKSSEKLQLDIASIKIT 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19590.4969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19590.4969.1 >prot_H-paniculata_contig19590.4969.1 ID=prot_H-paniculata_contig19590.4969.1|Name=mRNA_H-paniculata_contig19590.4969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp ARALANACNKTGHRISFFMRKGADCLSKWVGEAERQLRLLFEQARRHQPSback to top mRNA from alignment at H-paniculata_contig19590:888..4201- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19590.4969.1 ID=mRNA_H-paniculata_contig19590.4969.1|Name=mRNA_H-paniculata_contig19590.4969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3314bp|location=Sequence derived from alignment at H-paniculata_contig19590:888..4201- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19590:888..4201- >mRNA_H-paniculata_contig19590.4969.1 ID=mRNA_H-paniculata_contig19590.4969.1|Name=mRNA_H-paniculata_contig19590.4969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1236bp|location=Sequence derived from alignment at H-paniculata_contig19590:888..4201- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |