mRNA_H-paniculata_contig1959.4968.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI) HSP 1 Score: 888 bits (2295), Expect = 0.000e+0 Identity = 437/505 (86.53%), Postives = 469/505 (92.87%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFKHTGEQGIAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SVAGVTGAR GLP DL +FV RVR+ATDKPLSVGFGIS+ E V VA IADGVVVGSA MN++DE+ ADAP EIA HLK + L + AEM+F+HTGEQG+AY+GKDVSGGYFG+FGGRYIPETLVEAHRELE AYEAAKADP FHEEVAWYRREYIGGPTPMYHAKRL+ EMGGAQIWLKREEL+HTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGM+C+IYMGAVDCERQKLNVFRMKMLGA V+PVESGSRTLKDAINEAMRDWVTNV DTHYLIGSAIGPHPFPTIVRDFQ+VIGKEARSQ+++M G+LPD+VVACVGGGSNAIG+FHPFV DVDAGDVKL+GVEAGGKGMDA+NSATLTQG+PGVLHGTRTYLLQD DGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEY AVTDVQALEALQLLARTEGLISALEPSHAVY MQ+AK +SPD+IVL+NLCGRGDKDMHTVAKYLG DV
Sbjct: 237 SVAGVTGARSGLPADLKDFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVDADAPASEIAAHLKKFTEGLKAGITSAEMSFEHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQIWLKREELSHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMECIIYMGAVDCERQKLNVFRMKMLGAKVVPVESGSRTLKDAINEAMRDWVTNVVDTHYLIGSAIGPHPFPTIVRDFQAVIGKEARSQIVEMAGKLPDYVVACVGGGSNAIGMFHPFVGDVDAGDVKLVGVEAGGKGMDALNSATLTQGSPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYAAVTDVQALEALQLLARTEGLISALEPSHAVYHAMQMAKGMSPDQIVLVNLCGRGDKDMHTVAKYLGEDV 741
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA) HSP 1 Score: 813 bits (2100), Expect = 3.330e-290 Identity = 401/507 (79.09%), Postives = 440/507 (86.79%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFKHTG--EQGIAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SV GVTGAR GLP+DL FVAR+RS TDKPL+VGFGIS EHV VA +ADGVV GSA+MN+ID++ DA + H+K + LT L+ +M++ HTG E AY D+ YFG FGGRYIPETLVEAHRELE AY A+ADPKFHEE+AWYR+EYIGGPT MYHAKRLS ++GGAQIWLKREELAHTGAHKINNAVGQALLAKRIGK RIIAETGAGQHGVATATVCALLGM+C++YMG VDCERQKLNVFRM MLGA V+PV SGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKE+R Q+L+ TGRLPD+V+ACVGGGSNAIG+FHPFV DV+ G VKL+GVEAGG+GMDA+NSATLT G PGVLHGTRTYLLQD DGQIPETHSISAGLDYPGVGPEH+WLKDSGRA+Y AVTD QALE LQ LARTEGLISALEPSHA+Y GMQLAKTL DKIVLIN+CGRGDKDMHTVAKYLG V
Sbjct: 253 SVTGVTGARTGLPDDLKQFVARIRSKTDKPLAVGFGISQPEHVNGVAELADGVVCGSAIMNAIDKISPDASSADKRAHIKAFTQSLTQGLKDGQMSYTHTGAEETSDAYAAADMKAAYFGAFGGRYIPETLVEAHRELEQAYAEAQADPKFHEEIAWYRKEYIGGPTVMYHAKRLSEQLGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECIVYMGEVDCERQKLNVFRMNMLGAKVVPVTSGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKESREQMLEKTGRLPDYVIACVGGGSNAIGMFHPFVKDVEEGSVKLIGVEAGGEGMDALNSATLTMGKPGVLHGTRTYLLQDKDGQIPETHSISAGLDYPGVGPEHAWLKDSGRADYVAVTDKQALEGLQTLARTEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVQV 759
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: H6WB94_VAULI (Tryptophan synthase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB94_VAULI) HSP 1 Score: 793 bits (2049), Expect = 3.870e-284 Identity = 388/507 (76.53%), Postives = 436/507 (86.00%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFKHTGEQG--IAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SV GVTGAR GLP +L F+AR+R+ TDKP++VGFGIS + HV V+ IADG V GSA+MN +D + ++A + EH+K + + LT L ++ +KHTG + YK D+ YFG++GGR+IPETLVEAHRELE AYE A ADPKFHEEV WYR+EYIGGPT MYHAKRLS +MGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGK RIIAETGAGQHGVATATVCALLGM+C++YMG VDCERQKLNVFRM MLGA V+PV+SGSRTLKDAINEAMRDWVTNVR THYLIGSAIGPHPFP IVRDFQSVIGKEAR+Q+L+ GRLPD+V+ACVGGGSNAIG+FHPF+ DV+ G VKL+GVEAGG+GMDA+NSATLT GTPGVLHGTRTYLLQD +GQIPETHSISAGLDYPGVGPEH+WLKDSGRAEY A TD QALE LQ LA+ EGLISALEPSHA+Y GMQLAKTL DKIVLIN+CGRGDKDMHTVAKYLG V
Sbjct: 144 SVTGVTGARTGLPANLKEFIARIRTKTDKPIAVGFGISESSHVEQVSEIADGAVCGSAIMNHLDTISSEASPADKREHIKKFTANLTKDLNEGKLTYKHTGTENPYAEYKNADMRSAYFGDYGGRFIPETLVEAHRELEQAYEEALADPKFHEEVDWYRKEYIGGPTVMYHAKRLSEKMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECIVYMGEVDCERQKLNVFRMNMLGAKVVPVKSGSRTLKDAINEAMRDWVTNVRTTHYLIGSAIGPHPFPKIVRDFQSVIGKEARAQMLEKVGRLPDYVIACVGGGSNAIGMFHPFLKDVEEGKVKLIGVEAGGEGMDALNSATLTMGTPGVLHGTRTYLLQDKEGQIPETHSISAGLDYPGVGPEHAWLKDSGRAEYVAATDAQALEGLQTLAQLEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVTV 650
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A7S4DAV4_HETAK (Tryptophan synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAV4_HETAK) HSP 1 Score: 702 bits (1811), Expect = 1.820e-246 Identity = 361/510 (70.78%), Postives = 405/510 (79.41%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFKHTGEQGIAYKGKDVSGGYFGE-----FGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
S+ GVTGAR GLP+DL +FVAR+R TD PL+VGFGIS EHVA V+ +ADGVVVGSA+MN+ID A + E A L+ +V L G +G AY S YFG+ FGGRYIPETL EAH ELE AY AKADP F EV +YRRE++GGPTPMYHA+RLS GGAQIWLKREELAHTGAHKINNAVGQALL KR+GK R+IAETGAGQHGVATA VCA +G+ CV+YMGAVDCERQ LNVFRMKMLGA V PV +G RTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQ+VIGKEAR Q+L+ GRLPD VVACVGGGSNAIG+FHPFV D + V+L+GVEA G G+D +SATLT G+PGVLHGTRTY++QD GQIPETHSISAGLDYPGVGPEH++LKD GRAEY AVTD Q LE Q L+R EG+I ALEPSHAVY MQLAKT+ PD+IVL+NLCGRGDKDMHTVAK D+
Sbjct: 226 SLTGVTGARSGLPDDLPDFVARIRGVTDMPLAVGFGISQPEHVAQVSKLADGVVVGSAIMNTIDGCAAGSSAQEKAAALEAFVGTLKGACGEPAQTAGPARARG-AYVAPPTST-YFGDDAQTGFGGRYIPETLAEAHVELEKAYAEAKADPAFQAEVDFYRREFVGGPTPMYHAERLSKHCGGAQIWLKREELAHTGAHKINNAVGQALLVKRMGKTRVIAETGAGQHGVATAAVCAHMGLPCVVYMGAVDCERQALNVFRMKMLGADVRPVFAGQRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQAVIGKEARQQILEKAGRLPDVVVACVGGGSNAIGMFHPFVEDKE---VRLVGVEAAGAGLDKKHSATLTMGSPGVLHGTRTYVIQDDQGQIPETHSISAGLDYPGVGPEHAYLKDIGRAEYCAVTDEQVLEGFQTLSRCEGIIPALEPSHAVYQAMQLAKTMRPDQIVLVNLCGRGDKDMHTVAKAYNVDL 730
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: W7TQB9_9STRA (Tryptophan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQB9_9STRA) HSP 1 Score: 694 bits (1792), Expect = 1.090e-243 Identity = 355/513 (69.20%), Postives = 417/513 (81.29%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLE-----GAEMAFKHTGE---QGIAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
S+ GVTG+R +P DL +FVAR+R+ TDK L+VGFGIST HVA VA++ADGVVVGSA++++ID + A ++ +++ L G + G H GE + +A + +DVS +FGEFGGRYIPETLVEAHRELE AYEAA DP F EEVA+YR++YIGGPTPMYHAKRL+ +GGAQIWLKREELAHTGAHKINNAVGQALLAKR+GK RIIAETGAGQHGVATATVCAL+ M+C+IYMGA DCERQ LNVFRMKMLGA V+PVESGSRTLKDAINEAMRDWVTNV+ THYLIGSAIGPHPFPTIVRDFQS+IG EAR+Q+++MTG+LP+ VVACVGGGSNAIG+FH F D V+L+G EAGG+G+D NSATL+ G PGVLHGTRTYL QD DGQI ETHSISAGLDYPGVGPEH++LKDSGRA Y AVTD QALE ++L +TEG+I ALEPSHA++ M+ AK L + VL+NLCGRGDKDM TVAK LG ++
Sbjct: 232 SLTGVTGSRSDVPVDLKDFVARIRAVTDKNLAVGFGISTPTHVAQVAALADGVVVGSAILHAIDSAGPQSDTQARAAKVQAFIAELKGGAQKPGAAGDAGRVTHNGEGNGKAVA-EDRDVSHRHFGEFGGRYIPETLVEAHRELEEAYEAALKDPAFQEEVAFYRKQYIGGPTPMYHAKRLTEAVGGAQIWLKREELAHTGAHKINNAVGQALLAKRLGKQRIIAETGAGQHGVATATVCALMDMECIIYMGAADCERQALNVFRMKMLGAKVVPVESGSRTLKDAINEAMRDWVTNVKTTHYLIGSAIGPHPFPTIVRDFQSIIGSEARAQIVEMTGKLPEVVVACVGGGSNAIGMFHAFRNDAS---VRLVGAEAGGEGLDGKNSATLSMGRPGVLHGTRTYLQQDIDGQILETHSISAGLDYPGVGPEHAFLKDSGRATYVAVTDQQALEGFKMLCKTEGIIPALEPSHALFTAMEEAKKLPKEATVLMNLCGRGDKDMITVAKALGVNL 740
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A7R9Y8B0_9STRA (Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8B0_9STRA) HSP 1 Score: 683 bits (1762), Expect = 3.900e-241 Identity = 356/514 (69.26%), Postives = 410/514 (79.77%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNY-VSVLTGVLEGAEMAFKHTGEQGIAYKGKDVS-----------GGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLG 1506
SV G+TG EDL FV RVR TDKPL+VGFGI T E VA V+ IADGVVVGSA++NS+ D + E A +L+ + S+ +GV E +E + +A K +S +FG+FGGRYIPETL+ AH ELEAAY+ A DP F EE+ +YRRE+IGGPTP+Y AKRL+ + GGA+IWLKREELAHTGAHKINNAVGQALLAKR+GK RIIAETGAGQHGVA+A VCALL +D +YMGAVDC+RQ+LNVFRM+ LGA V+PVESGS TLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIG+EAR Q+L+ G+LPD+VVACVGGGSNAIG+F FV D VKL+GVEAGG+G+D +NSATL+ G PGVLHGTRTYLLQD+DGQIPETHSISAGLDYPGVGPEH++LKDSGRAEY AVTD QALEA Q L+RTEG+I ALEPSHA+Y MQLA +L DK VLINLCGRGDKDM+TVAK LG
Sbjct: 94 SVTGITGGAGATAEDLQAFVGRVRKFTDKPLAVGFGIKTPEQVAEVSQIADGVVVGSAIVNSVS---LDKSLAENAAYLEEFCASLKSGVQERSE--------ENVAGKSGPLSEADAETLATYGDSHFGDFGGRYIPETLLRAHMELEAAYKEAMEDPAFKEEIDFYRREFIGGPTPLYLAKRLTEKCGGARIWLKREELAHTGAHKINNAVGQALLAKRLGKKRIIAETGAGQHGVASACVCALLDLDLTVYMGAVDCDRQRLNVFRMQQLGAKVVPVESGSATLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGREAREQMLEKAGKLPDYVVACVGGGSNAIGMFSGFVND---DSVKLVGVEAGGEGVDGLNSATLSMGKPGVLHGTRTYLLQDADGQIPETHSISAGLDYPGVGPEHAYLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHAMQLAASLPKDKDVLINLCGRGDKDMNTVAKTLG 593
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A7S1U774_9STRA (Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U774_9STRA) HSP 1 Score: 686 bits (1771), Expect = 9.350e-241 Identity = 355/509 (69.74%), Postives = 409/509 (80.35%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFKHTGEQGIAYKGKDVSGGY----FGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SV GVTGA+ +DL F+ RVR T+KPL+VGFGI+ E VA V+S+ADGVVVGSA++N++ E + A LK + + L + E +H ++ KD Y FGEFGGR+IPETL+ AH+ELEAAY A +DP+F EE+ +YRRE+IGGPTP+Y AKRL+ +MGGA+IWLKREELAHTGAHKINNAVGQALLAKR+GK RIIAETGAGQHGVA+A VCALL +D +YMGAVDCERQKLNVFRM+ LGA VIPVESGS TLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEAR+Q+L+ G+LPD+VVACVGGGSNAIG+FHPF D VKL+GVEAGG G + +NSATL+ G PGVLHGTRTYLLQD DGQIPETHSISAGLDYPGVGPEH++LKDSGRAEY AVTD QALEA Q L+RTEG+I ALEPSHA+Y MQLA +L DK VLINLCGRGDKDM VA+ LGA +
Sbjct: 227 SVTGVTGAKSADLKDLETFIGRVRKFTNKPLAVGFGIAKPEQVAEVSSLADGVVVGSAIVNTVLE---GTSTEDNAASLKAFTATLKDAV--VERGAEHIAGGDVSEAAKDDLATYGDAHFGEFGGRFIPETLLRAHQELEAAYNEAMSDPEFIEEIKFYRREFIGGPTPLYLAKRLTEKMGGARIWLKREELAHTGAHKINNAVGQALLAKRLGKKRIIAETGAGQHGVASACVCALLDLDLTVYMGAVDCERQKLNVFRMEQLGAKVIPVESGSATLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARAQMLEKAGKLPDYVVACVGGGSNAIGMFHPFTEDES---VKLVGVEAGGHGAEGLNSATLSMGKPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHAFLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHTMQLAASLPKDKDVLINLCGRGDKDMPQVARILGAQI 727
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A7S0XDP8_9STRA (Tryptophan synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDP8_9STRA) HSP 1 Score: 679 bits (1751), Expect = 1.560e-237 Identity = 347/509 (68.17%), Postives = 406/509 (79.76%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFK----HTGEQGIAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SV GVTGAR LP DL FV R+R ++D PL+VGFGIST EHV V+ IA+GVV+GSA++++ID P E A+ L++++S L+ L E A HT +D+S FGEFGGRYIPETL+EAHRELEAAY +A ADPKFHEE+A+YRRE+ GGPTP+Y A+ L+ +MGGA IW KREELAHTGAHKINNAVGQALLAKR+GK RIIAETGAGQHGVATA VCA G+DC IYMGAVDCERQ LNVFRM +LGA V+PV+SGS+TLKDAINEAMRDWVTNVR THYLIGSAIGPHPFPTIVRDFQSV+G EAR Q+LD G LPD VVACVGGGSNAIG+FHPF+ D V+L+G EAGG+G D +NSATL+ GTPGVLHGT+TYLLQD GQI +T SISAGLDYPGVGPEH++LKDSGRAEY AVTD QALEA ++++EG+I ALE SHA+Y MQ+AK + P K V+IN+ GRGDKDM TVAK +G +
Sbjct: 236 SVTGVTGARGELPSDLKEFVNRIRKSSDVPLAVGFGISTPEHVHQVSEIAEGVVLGSAIISTIDSALDKTPK-ERAKTLEDFISTLSVALTKRETAKDTENFHTDNSAPKPIHRDISNRNFGEFGGRYIPETLIEAHRELEAAYASAIADPKFHEEIAFYRREFTGGPTPLYFAENLTKKMGGADIWFKREELAHTGAHKINNAVGQALLAKRLGKRRIIAETGAGQHGVATAAVCAHFGLDCTIYMGAVDCERQALNVFRMNVLGAKVVPVQSGSKTLKDAINEAMRDWVTNVRTTHYLIGSAIGPHPFPTIVRDFQSVMGIEARQQMLDKAGSLPDVVVACVGGGSNAIGMFHPFINDKS---VRLVGAEAGGEGPDGLNSATLSYGTPGVLHGTKTYLLQDESGQISKTKSISAGLDYPGVGPEHAFLKDSGRAEYVAVTDKQALEAFFEVSKSEGIIPALETSHALYAAMQIAKEIGPGKKVVINISGRGDKDMMTVAKIMGVKI 740
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A8J5XVG6_DIALT (Tryptophan synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVG6_DIALT) HSP 1 Score: 668 bits (1723), Expect = 8.090e-234 Identity = 354/516 (68.60%), Postives = 400/516 (77.52%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLT----------GVLEGAEMAFKHTGEQGIAYKGKDVSGGYFGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGGKGMD-AINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
S+ GVTGAR LP++L F+ RVR+ ++ PL+VGFGI+T HVA +A+ ADGVVVGSAV +++ + V +I L +V L GAE +Q + +FGEFGGRYIPETLVEAHRELE AY+ AK DP FH EVA YR YIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKR+GK RIIAETGAGQHGVATATVCALLG++CV+YMGA D RQ LNVFRMK+LGATV VESGS+TLKDAINEAMRDWVTNV THYLIGSAIGPHPFPTIVRDFQSVIG EAR Q+ TG+LPD VVACVGGGSNAIG+FH FV D VKL+GVEAGG G+ A +SATL GTPGVLHGTRTYLLQ+ GQI ETHSISAGLDYPGVGPEH++LKDS RAEY AVTD +ALE + L RTEG+I ALEPSHA+Y MQLAK + P+++VLINLCGRGDKDMHTVA +G +
Sbjct: 182 SLTGVTGARAELPKELPQFIKRVRANSNVPLAVGFGIATRAHVAEIATFADGVVVGSAVCKAVENVK---DVADIRPTLAAFVQSLLPDSAQTATAKAARPGAENEEGALAQQNAKIDESVKAAAHFGEFGGRYIPETLVEAHRELEEAYDKAKKDPAFHAEVAEYRARYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRLGKKRIIAETGAGQHGVATATVCALLGIECVVYMGAEDVRRQSLNVFRMKVLGATVHAVESGSKTLKDAINEAMRDWVTNVSTTHYLIGSAIGPHPFPTIVRDFQSVIGLEAREQIQRDTGKLPDVVVACVGGGSNAIGMFHAFVPDTA---VKLVGVEAGGDGVGTARHSATLALGTPGVLHGTRTYLLQNKVGQITETHSISAGLDYPGVGPEHAFLKDSMRAEYVAVTDKEALEGFKALCRTEGIIPALEPSHALYHAMQLAKGMRPEQVVLINLCGRGDKDMHTVAHAMGVTL 691
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Match: A0A7S0Y4J5_HEMAN (Tryptophan synthase n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0Y4J5_HEMAN) HSP 1 Score: 663 bits (1711), Expect = 7.740e-232 Identity = 353/510 (69.22%), Postives = 396/510 (77.65%), Query Frame = 1
Query: 1 SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASV-ASIADGVVVGSAVMNSIDELPADAPVGEIAEHLKNYVSVLTGVLEGAEMAFK-HTGEQGIAYKGK-DVSGGY-FGEFGGRYIPETLVEAHRELEAAYEAAKADPKFHEEVAWYRREYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMDCVIYMGAVDCERQKLNVFRMKMLGATVIPVESGSRTLKDAINEAMRDWVTNVRDTHYLIGSAIGPHPFPTIVRDFQSVIGKEARSQVLDMTGRLPDHVVACVGGGSNAIGIFHPFVADVDAGDVKLMGVEAGG-KGMDAINSATLTQGTPGVLHGTRTYLLQDSDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYTAVTDVQALEALQLLARTEGLISALEPSHAVYGGMQLAKTLSPDKIVLINLCGRGDKDMHTVAKYLGADV 1515
SV GVTGAR L DL F+ R+R+ TD P++VGFG+S HV S+ A+ ADG VVGSA++N++ L A A V+ L L G K +G+ K DV Y FGEFGGRYIPETLVEAH ELE Y A DP F EEVA YRREYIGGPTP YHAKRL+ MGGAQIWLKREELAHTGAHKINNA+GQALLAKRIGK RII ETGAGQHGVATAT CAL+GMD +YMGA DC RQ LNVFR+KMLG V+PV +GS TLKDAINEAMRDWVTNVRDTHY+IGSAIGPHPFPTIVRDFQSVIGKEAR Q+LD G+LPD +VACVGGGSNAIG+FHPFV D VK+ GVEAGG G++ +SATLT G PGVLHGTRTYLLQD +GQ+ ETHSISAGLDYPGVGPEH+WLKDSGRAEY VTD QALEA+Q L+RTEG+I ALEPSHA+Y GMQLAK++ PD+ VL+N CGRGDKDM TV K LG +V
Sbjct: 201 SVTGVTGARANLAADLPAFLKRIRAHTDVPVAVGFGVSQRAHVESLKANGADGAVVGSAIINTV--LEAKDSKDRCAR-----VTALIKELTGGPCDPKASSGDAKHKTMPKPDVRPEYSFGEFGGRYIPETLVEAHEELEKEYIKAMKDPSFLEEVARYRREYIGGPTPTYHAKRLTEMMGGAQIWLKREELAHTGAHKINNAIGQALLAKRIGKKRIICETGAGQHGVATATACALMGMDLTVYMGAEDCRRQSLNVFRIKMLGGKVVPVSAGSATLKDAINEAMRDWVTNVRDTHYIIGSAIGPHPFPTIVRDFQSVIGKEARQQMLDQAGKLPDAIVACVGGGSNAIGLFHPFVEDKS---VKIFGVEAGGVSGLEGKHSATLTAGKPGVLHGTRTYLLQDEEGQVTETHSISAGLDYPGVGPEHAWLKDSGRAEYVCVTDGQALEAMQALSRTEGIIPALEPSHAIYYGMQLAKSMKPDQAVLVNCCGRGDKDMITVMKALGVEV 700 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1959.4968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1959.4968.1 >prot_H-paniculata_contig1959.4968.1 ID=prot_H-paniculata_contig1959.4968.1|Name=mRNA_H-paniculata_contig1959.4968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=506bp SVAGVTGARDGLPEDLSNFVARVRSATDKPLSVGFGISTAEHVASVASIAback to top mRNA from alignment at H-paniculata_contig1959:16498..23017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1959.4968.1 ID=mRNA_H-paniculata_contig1959.4968.1|Name=mRNA_H-paniculata_contig1959.4968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6520bp|location=Sequence derived from alignment at H-paniculata_contig1959:16498..23017- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1959:16498..23017- >mRNA_H-paniculata_contig1959.4968.1 ID=mRNA_H-paniculata_contig1959.4968.1|Name=mRNA_H-paniculata_contig1959.4968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3036bp|location=Sequence derived from alignment at H-paniculata_contig1959:16498..23017- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |