mRNA_H-paniculata_contig1959.4967.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1959.4967.1
Unique NamemRNA_H-paniculata_contig1959.4967.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.090e-48
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 1 
Query:   55 FPPTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTY 372
            FPP R GRGAPSMFPRKL+QIL  +D  +I WD DG+SFHI NY+ ++E  MP FYRHNKLTSFQRQLNLYGF+KRGRDE   GHYYHP FQRDRPE+L  VRR+Y
Sbjct:    5 FPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSY 110
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.500e-43
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 1 
Query:   55 FPPTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTY 372
            FPP R GRGAPSMFPRKL+QIL  +D  +I WD DG+SFHI NY+ ++E  MP FYRHNKLTSFQRQLNLYGF+KRGRDE   GHYYHP FQRDRPE+L  VRR+Y
Sbjct:   14 FPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSY 119
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.220e-25
Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 1 
Query:   25 MATTEELYAAFPPTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQNG 381
            M  TE+ Y  +P T   RGAP +FPRKLF++L   D  VI WD +G+ F I +   F  +++ ++++H+K TSFQRQLNLYGFRK  + E   G+Y HP FQRD PE L  VRRT Q G
Sbjct:   39 MVVTED-YKRYPRT-GKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGER-CGYYVHPHFQRDHPEWLSKVRRTPQPG 154
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.510e-21
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 1 
Query:   61 PTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRK--RGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQNGG 384
            P    RGAP +FPRKL++IL+     +I W   G+SF I   + FV   + +++RH K +SFQRQLNLYGFRK  +G D    G Y H  F RD+PELL  VRR  Q+ G
Sbjct:    4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTD---VGSYAHECFIRDQPELLTKVRRIPQSAG 110
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.220e-21
Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 1 
Query:   61 PTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRR 366
            P    RGAP +FPRKL++ILT     VI W + G+SF I+  + FV + +  ++RH K +SFQRQLNLYGFRK  +  P TG Y H  F RD+PE L  VRR
Sbjct:   96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKG-PDTGAYAHEHFLRDQPESLTFVRR 196
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7S2WTE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTE1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.760e-20
Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 1 
Query:   94 FPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGF---RKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQNGGKNEGCDSSMDDDYFQS 432
            FPR+L+ +LT  D  +I WD DG+SF I++   F  Q +P+++RH++LTSFQRQLN+YGF   R  G    Y   Y HP+FQR RP+LL  V+RT +   K+   D++M++D   S
Sbjct:   35 FPRRLYDMLTKEDVKIISWDHDGKSFRILDANLFSSQVLPKYFRHSRLTSFQRQLNMYGFLYLRNNGGAGQYV--YMHPNFQRGRPDLLHSVKRTSR---KSTAGDAAMEEDATAS 145
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A6V1NV08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV08_HETAK)

HSP 1 Score: 95.9 bits (237), Expect = 7.080e-19
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:   76 RGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQ 375
            RGAP  FPRKL+ ++ V    +I W   G SF++ +   F+   +P+ +RHN  +SFQRQLNLYGF KR    P  G Y H  F R +PELLD ++RT Q
Sbjct:   11 RGAPQAFPRKLYDLINVEPDSIISWSDLGDSFYLHDQPKFIADVLPRHFRHNHFSSFQRQLNLYGF-KRVASGPEQGAYTHNLFHRSQPELLDSIKRTPQ 109
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.180e-18
Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1 
Query:   61 PTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQNGGK 387
            P    RGAP +FPRKL++ILT+    +I W  +G SF I    +FV + + +++RH K +SFQRQLNLYGFRK  +  P TG Y H  F RD    L  VRR  Q+ G+
Sbjct:   74 PRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKG-PDTGAYAHEGFLRDDESQLVKVRRWAQSAGR 181
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.610e-18
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1 
Query:   76 RGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRR 366
            RGAP  FPR+L+++L   D  V+ W  +G+ F I +   FV  T+ ++++HNK TSFQRQ NLYGFRK  R  P  G Y H  F++ R E L  VRR
Sbjct:    3 RGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRG-PDAGMYIHEHFKKGRLEDLVKVRR 98
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BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Match: A0A7S3H846_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H846_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.840e-18
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1 
Query:   76 RGAPSMFPRKLFQILTVSDRGVIEWDADGQSFHIINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPSFQRDRPELLDMVRRTYQNGGKNEG 396
            R   + FP KLF +++  D G++ W   G SF + +   FV   +P+ ++HN  TSFQRQLNLYGFR+    +   G YYHP FQ+ + EL + +RR    G +  G
Sbjct:   29 RNYSNTFPVKLFDLVSSEDEGIVGWQGHGTSFQVRDMDKFVNLILPKHFKHNNFTSFQRQLNLYGFRRSASYD--KGAYYHPQFQQGQRELAESIRRVLAPGSEGSG 133
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1959.4967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB2_ECTSI1.090e-4872.64HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A6H5JRR2_9PHAE1.500e-4372.64HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7R9YBQ9_9STRA3.220e-2550.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2BSE7_9STRA1.510e-2148.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G7U9_9STRA2.220e-2150.98Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WTE1_9STRA2.760e-2045.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6V1NV08_HETAK7.080e-1947.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CXJ7_9STRA1.180e-1846.79Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835Z6Z9_9STRA1.610e-1847.42HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A7S3H846_9STRA2.840e-1840.19Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1959contigH-paniculata_contig1959:5985..14289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.5
Seed ortholog evalue2.3e-39
Seed eggNOG ortholog2880.D8LLB2
KEGG koko:K09414,ko:K09419
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Exons2
Model size860
Cds size834
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1959.4967.1prot_H-paniculata_contig1959.4967.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1959 5985..14265 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929485.1530135-CDS-H-paniculata_contig1959:5984..65741622929485.1530135-CDS-H-paniculata_contig1959:5984..6574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1959 5985..6574 -
1691480882.129331-CDS-H-paniculata_contig1959:5984..65741691480882.129331-CDS-H-paniculata_contig1959:5984..6574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1959 5985..6574 -
1622929485.1719027-CDS-H-paniculata_contig1959:14021..142651622929485.1719027-CDS-H-paniculata_contig1959:14021..14265Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1959 14022..14265 -
1691480882.1394584-CDS-H-paniculata_contig1959:14021..142651691480882.1394584-CDS-H-paniculata_contig1959:14021..14265Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1959 14022..14265 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929485.1972196-UTR-H-paniculata_contig1959:14265..142891622929485.1972196-UTR-H-paniculata_contig1959:14265..14289Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1959 14266..14289 -
1691480882.1473835-UTR-H-paniculata_contig1959:14265..142891691480882.1473835-UTR-H-paniculata_contig1959:14265..14289Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1959 14266..14289 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1959.4967.1

>prot_H-paniculata_contig1959.4967.1 ID=prot_H-paniculata_contig1959.4967.1|Name=mRNA_H-paniculata_contig1959.4967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
MATTEELYAAFPPTRAGRGAPSMFPRKLFQILTVSDRGVIEWDADGQSFH
IINYKNFVEQTMPQFYRHNKLTSFQRQLNLYGFRKRGRDEPYTGHYYHPS
FQRDRPELLDMVRRTYQNGGKNEGCDSSMDDDYFQSHPQPKRDRPGRGHP
GEIVPMPDGPQQQHGHHQYQHPQHPQHQPSNKPYSAGIDGSGRGASGWDP
QRVASADCSSIREDLNHDKPQRPWFYSGSPKTTAAVVRKEIAARRSGSGT
TSELGVENPPYEGRSRVDGNGGGGGGGG
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mRNA from alignment at H-paniculata_contig1959:5985..14289-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1959.4967.1 ID=mRNA_H-paniculata_contig1959.4967.1|Name=mRNA_H-paniculata_contig1959.4967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8305bp|location=Sequence derived from alignment at H-paniculata_contig1959:5985..14289- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGTGAGGAGAGAGGGTGTTGCAATGGCGACGACAGAGGAGTTATACGC
TGCTTTTCCGCCGACTAGGGCAGGGCGCGGGGCGCCGTCTATGTTTCCAA
GGAAACTATTCCAGATACTCACCGTGAGCGATCGTGGAGTAATCGAGTGG
GACGCGGATGGGCAGAGCTTTCACATCATCAACTACAAGAATTTTGTGGA
GCAGACCATGCCGCAGTTCTACAGACACAACAAGCTCACTTCTTTCCAGC
GGCAGCTCAATCTCTACGGTAAGGAGCTGTCGGGAGTAGGGTCTCTTTCA
TCCGGTTGACGTGGGGGTGGGAATGGGTATTTTCGGTTGTGGGACGCCTG
ATACGGAAGCTTCGGAGTTATTGCTACTCCAAAAAATGTTTGGCAGGCCA
CAACGACTCTATTATGTCGTCTTTTTGTTGTACTTTCTCCCTATACAAGG
CATGGTGAAAAACACGGGGCTGCTGTGATTGTGATTATCTCAAGAAGTAT
CAGACGGCCTGTCAGGAGAGGAGAGAGGCATTTCGAGAAGCGTCGATCTG
TGCTAATACGACGCGAGTCGCTACATACAGTCTTGTTATGTATTTAGTCG
TCAACGTGTTCGGTGGTCGGCACCCCTAAAATCTAAAATCATGTTACAAG
TCTAGTCTGGCTCTTATTCTCTATTTATATTACTGTATGTGGATTACAGA
AAGTTGGTTGGGGCAGTTGGGACCCTCCTGCGTGTTTTTTTATGGGAACG
TGATGATGGTGTGCTGCGGCTGTTATGTATCAGAAGATGATGTTATGATG
GTCGTGCTGCTGCGGTGCTTTGTTCGCTTTTTCAGCAGGCAGCAATCTCG
GAGAAATTATGGTAACCAGACTATTCTTGTTTCAGCTTCGAGGATTAATG
GTAACCACTCTCTGTCACCCACATTCATTGTACTTAAAACTAGAGGCGTC
TTATCAGCAACACCAGGTCCTTGACTGTACTGAATGTCCTGTCTGTTTGT
GTACAATTTTGCAAACCATGATCAGACCGAAAACGAGGGTGTCGAAAACA
ACTAAAGCTTTTGATCTTGATCAGCAGCAGACAGCGCACTTCACGTCTAG
CTAAAGGCATCTACCTGTGGAGTGTCGGGGGTCGGGACCGTTGGGGCAGT
ACACATAAAAGCTTTCTTGCCTAGATGCCACACAATTCTATATATTCAGA
CCTAGGGTAACTCAGGATGTGATGAAAGGAGATTCATGAGGCTGGTCACA
TGATTCAATCATATGCTGTGGTTGTTGTTTGTCCTCTGTACTTCATCCAT
CATCTCACACGACTGGAATTGATACATTACTTTCCCCCTTGCCCCGTCTC
TTCAGCTCTTTTTTCGTGCCTTGTCATCATTTTTACCCTGGAGCCACTTT
GTTTGTGCGTTTGTCAGTAGAGCTTACGACTTTCTCCCATGTCTATAAAG
TGAGCATACCACAATGACTAAAGAAGTCACACCCTAGAGCGCCCACAACG
TTGTGCCCAAATATGTTGTGCCCAAAATCTGTTGTGCTCGCAATCTACGC
CAACGGCACTAATTCGAGCCTTACTAATGTGCACTGAAGGCCTCGGCAAT
TTGGTCGGGGGGCTAGGGTAAGCGATAGTTTCCGCGTTGGATCTGCTGGT
GTCGATGAACACCGAAGTGTGAAACCGTAAAACAGTGAAGCTCAACCATT
CTATTCGATGAAAGTGGTAAATTGTACTCCCTATATTGGTCGTAAATACC
ATGGTTGAAAACATTTTATTATCTTGGTTCAGACCATTTCCTAAAGATCC
AAAATCAATGCGGCACCATGGGGATTAATTTTGCCGTAAAATAATAAGTT
TACCTTTTCGTTTGGTGATGGCGAAAGTGAAGAATATAGTATGTCGTGCT
GCAGTACAGTCAGCACCATGGCCAGTCGGCCGTAGCTGCCTGCTCCTTTC
ACCCCGCCGTCATCTTCCCCATCATTCAGACATATGCAAAAGACAAAACG
AACCTGACTGAAATAAAGGCTGGCTCCGAAGGTTCAAATCATACGACGAG
GATGCACAGAAAGAGCGAGAAAATGCACCATCATGAGGAAAAAGACAGAC
CGTAGTGTACCTTGGGCCACGAAATGTTTTCAGTCACCGATATTTTGAGG
ATCGTTCAACAAACATGTGTAGTAGGTAAAGGTCAGTCGACACAAGAGCA
CGCAGAGGACGTCTCGACGGGGATACTGAAGTATTGATCGTTGTACGTAT
TTATACCCATGAATGTTCCGTGATCGGTGTCTGTTAATTAGGACAAGAGT
ATAAATCAGACAATAGTAGTTGTAGACGGGTTTTTTAACTCCTCGTTTTG
ATCTACTTTTGCTGATCAGTCTTGAGTCTCCTCTCCCCACCGTATTTTTG
CAGCTGGTCTCCGCCCCAATATCTCCGGGTGAATCATGGCCGGTTGTTGT
TGGCCGTGGACTTTCGCTGCGACAATTGCCAATATCCACAGTACGATGAT
CTGTACTAGACAGACGTGCGCCGACGCACGGAGTTGTTATGCCGTTGTAT
ACGTTGTGACAGCCGGTGTATGATTGGTGGTCGGTCCAGCGCTGCTATGC
CTCGTCCCTGTGCAAGTGTGCTGTCAGCGACTTGACATGGTATCTTCGGC
GTCGTTGTTACCCGGACCCTGAATTCATCATTTATAGAGTACCAAACTGC
TGATACAATGGCAAGAACTTGGACCACACCATCTCTTCCTGGCGAGTAGA
CCGCACTTTTGTTTTTAATCATTGCCGTATATGTAATTGTTCTTCGCCCA
AGCTTTTGTTTTCTTCCGTTTGTTTGCCAATGCGGGTGCCACTGGGAGGA
GTACGTGCTCCAGAAGTTTACTTGTGCATCTAGGGCTGGACCGCAGTCCG
TACGTCTGTACCCCTACGCATTCTGTTTTTCTTATCGGGACTCAGTTCTC
TATCGGATCATCTGGCCCGAAACCGGGAGTGGATGGCGATGCCTTGGTTC
TTCCCTTGTAGCAGATATCATATCATCGCGGGGTGTGTGAGGGCAGAAGT
CTCACTCGCTTGTTAACGGTGGAATTGACGACTGTATATATGAGGTTTTG
AAATATATCCATGTTGGTTGCTGTTACCTACATTGTATTCGAATTAAGAG
AAGTGATGAAGGTGACCTCTTTGTCTCGCATTTTATATTTTTTGGAAACC
TTGGAAGCTCTTCTTTTTGTTCTTTGTAAATGAATCCTCTATTTACAACA
TAATAAAGGGGAAAGTGAGGTGTGTGAGCAATTGAATTGTGACCCCACTT
GCCACTTGTGAGGTCAGTTTTGTTTTTTGCCGAAATTGATCATGATCTAT
CTTGCTACTTTGTTAGTTTATCACATAAGCAGTCCGGTATCATATAGAGC
AACACAATGTGTAGGAGAAATTATATATATACCCTGATATACCTCTGTTG
ATTTTACTGTAAATGTGGGAGAAAAGTTGTGATGACGCTCAGTAGAGTTT
ACCGTACAGTACGCCAATTTCTTGCCAAAATGCCATCGCCCCTGCAATAC
TGGGCTCATGAATCATGGACGCCACTGAAAGTACCATCGCGGTCCCGCGG
AGCGGCCCAAACCACGAATCTCCTCCATGTTGCTCCTTTTGGCAAACTTT
GTCCCTCAAACTGGCTTCTGAAAGCATCCTATGTATGACGTGTTTGGTAA
AACAAAAATCGAGAAAAGGCTCCTCAACTCCTCTTGGGAGATGCGGCATA
ACTTCTAACAAATCACTTGACTGTTTACGAACGGACTGGCTCAGATTCGT
ACCTCTGTGACAAATAATAGAGGACAATAGAAAATGTCCTATTATGTAGC
TGTGTTGGTCTGGGGTGACAGTCCCGCCCAAGGCCCCATGTCCGGGGTTT
GCGTTATTGCTTGTGGACGGATTGGACGCTACTGTTGGAGACCTCTGTTT
GACCACGGGAAAGGGGTAGGTGTAAACTTCTCCGAGTGTCGATGATTGAG
CATTCGTTCTGTCAGATTTCCCTAGTCTATGGTATCCCACGCGTGTAGTG
GAAGGAGCCTTTGTACGTGGTGAGACTGAAACCGGTCCAAGAAAACTAGA
TTGGGTCGCTGGTTGTGTTATTGGCTGTATTATCGATCTATATTAATTGA
CTTCTCTCTGTATTACTGTACTGTCTGTGTACATGCAGGGTGTGTTCATA
TAGTTGGGATTATCTACGGTTTCACTGCATTCTTCACCATTGGCATGGGT
ATGGGTATGGGTATGGCTAGAGTACGGCCACATGTTTGTGATTGCCCGCC
GTCATGTCAATGAGCGCTCGTACTCTGCTTGGGAATATTGCACATGTTGA
TTCTACGAAGTGCCGTCTGTATCCTAGTATAATCTGACACAGTTGGTTCA
ACTGGGCTTCATCGCAAGTTATAATCGTACAATGTGTTCATGTACTGATT
GGATTTAACTCTAATCCCGCAGTCACAGCAATGCTGTCACTTTCAATCAA
GGGTGATCATGACTGCAAGGTGGCCCGCCGGTTCGTGAAAGGATGTATCT
CTCACCCGAATTAGCTGTCTCAATTCTGCCGACACACACTGACCCCGCCA
GGTGTGAATTGTTGGAGCTCGGAGTAATGGCTTCAGTTCCTGCGTTGGTT
TTGGTCGCGGTAACGCACAACCATCGCATTGGACAAAAGTGGTGAACTGG
CCTCAGAAAAATAACTGTCGGAAAATATAGTGGATCGTGGAGTATGGAGT
ATGTGGATGGATATAAGATACGCCATGCAAATGCCACGAGCTTTCAAGCG
ACTATTTATTCACTTCTTGTATTGCGGATGGGCTTCAGCCTAGGCTTAGC
GTTGTCCACATCACATACTACATATGTGGAGCGACATTATCTAGTAATGG
GACGCTTCCGCAAAGCGTGCTTCGAGATATGGGCTTGATGGATGACCACG
TTAGTCATCGTCCCCTGTAACAACGGTCGCAAGATACGACAGCCTCGCAG
CAGCAGAAGATCGCCATCGCTGCCGAGCGATGAGAACCTACAGCTTCTGC
TGTCAGGCTGCCGCCCCGCCCCGCCCCGCAGCTATCACCTCGGCGTTGTG
GATCTAGCTACGGCAGTTTCGGCGGCATGAAATGTGCTGACATCTTTAGC
AGAGTTATGTGTGAGGTGGGACGGGTGCATGTCGCATGATGTGTGGTGAT
TTGACATCATCATTATCGTGGAACGTGGCCCATGCGTGCACCAAACCGTG
AACAGTATACGCGTTTTAGTACTTTTCCTTGAAGAAGAAACAAGGCGAAA
ATGACCCCCACTTTCGCTTACTCCAGCCGCGTGAGAGAGGGTCTGACGAA
TTCAGGGGGAAGTTTGCCCAAAAAACTCCTCGATAATTTGTACACCGTCT
TTTTTTTTTCGGCGCGAAACTACCCGGCAAACGTGTGGTATACAAACACG
CCTCGACAACGGTCGTAGCGCCGCAGGCTCTTTAGGAACAAGAAATTATA
TGATGACAAATGCTAACCACAGTCGTTTCTCAGTAAAACCATCCCAACTG
CCGGTCTGTCTGGTGTGTACTCTCTAAACTAGATTGTTTATATGAACAGC
GGCCGCTCCGTATCCCTTTAGTCATGTCATCAGCGTCGGTTTGCTCTGTC
TTTGAGGTAGTGACTAGGTGGGTACCAGATGAGAACGGGTCGTGAAAGGG
CTTGAGGGTTTGATGTACTTTAGGCCCCTGTATTTGGCCTGTGTGCACAC
GACCACACCCTCACGATTCGCTTGTGCAATACCCAAGCCGGCCGTTGATT
GTGTGCGTCGCGTGTCGGAAATCAGCATATGCTCGTTGATCGCCACAGAC
ATTATATTGCATGTAGCAAGCTGCACACTCACTGTCGTCGCGTCCATTGA
GCAAGTGGTTAAATCTGGCGATCAAGTTGTATTCGGATTATAACAAGGAG
GCATTACGTATCTGTCATGCAGAAGATGACAGCACATGGTATCTAGAGAG
GTTATAGTGTCCCGAGTCATTTTTTTTGTACACATTGACAAATTTGTCTA
CAGAACAACAGCGGGTCCTACCTGTGTTGCATTCCGGTGGATGAAATTGA
TATAACTCTAACCCTAACCCTAACCCTAAGCAAAAAATTAGGTGAGTAAA
TCAAGCGTGGCACCGCAACCCTCACCTGTTGAGGATCTTTTTTGTATCAT
CGTCTACACACGCATAAAACTTATGAACATTGAAAGACACAACTACCGCT
GTGTTCCTTATATTACCAGCAATGTCCCTGGCGGGGCATGGGCTCATGTG
ATGACACCTGGAGTGTGCGAGACGTTTCTAAAAGTTCATGGTTGGTTCCA
TTATGTTGAAATTGGGGTGAGGTAGTTTGGGTTGGTTGGATTTTTGAATA
CTGTGAATCATTTGATTAAAAAAAAACATTTTTCATCACAAGTGTTTGTG
TATCATCGACACGCAGAGCATGAAACCACCTCGCGAGAGCACTGTGATAA
ACTTCTGGCAGAGCTTTCAAACTTTGTGCACGAGCGTGCGAACAGAGCAC
ATGTCTGATGTCCACACAATGGTAAGGTTTATGCCAAAAAAGCCCAGCGG
GTTGTAATTTGTAACCTTTTATGAACTAAACTGACTGTGGATCATAGCCA
CGACGATCGACCAAACGAAATATATTATGCTGGCTGTCTTCAGTGTCTGT
ATTGATTGACTGATCGCTGACCGCAAGCTGCCAGCTAGTCGTTTACAAGC
TCACGGCATCAATGAGTGCACGATACGGCAGCCTGCTCCTGTTGCACGCG
TTTCGGTCGGGTGCTGTTGGCTTGGCCTCTCGGCTTAACCCATTATGTCG
GCATGTGTTGGTATGTGGTGCTGGTGGTATAAATAAATTCTCGGTGGGAC
GAAACAGATGGAAGTCTACAAAAATACATGTAATATGTTGTACGCTGTTG
TATTTCCTAATCATTTTGTGCACGCGGTGTTCAGTCCCATCTTGGCTAAA
AGGTTGAAGACACTGCCCCCACATCCCATTCTATGTGTCCCAAGCATGGT
ATGTGCAAAGGCTCGTCCGAAATGATCGCGCTCTCCGCCTGCGCGGCGTG
TTGCTAAATGGGAAAATACAATACAAAAAACGCATGTTTCGGTGCCGACT
AGCCAAACACCCCCACCTTTGTTGTACTATAGTTTTTTTCGTTTCACATG
AGTTGCAGCACAGGTGACTAGTTGTGATCCGCCCCCGGTCAAATAGAAAA
AGTCAAGAAAAAGGTCAACCCTGTGAAACCCGCTTCAAGAAAAAACGAAA
TCGAAGAAACACAAACTCGGGAGCAGCCAGCTATGTACCTGCCTAATTCT
AGCAGGCACACAGGCGCTCTTCGCCCCCCTATCGTCGCAGCTCCGTAAGG
GGAGAGCTGTAAGCCAAAGCTGCATTCCAAGTCCTTGGCGGAGAGTATTA
GTTCAACACACGGATTGGAAAACCTTCATTTGATAGAGTTCTTCTCTGAC
TGGGGAACAGGAAAACACCAGCCGAAAAGCAGCTTCGCGCCACTCTACCG
GCTAACTGATTGTCCAATCAATTCACAACCCTAGAATATACACGCACCCT
TGACTCGCGACGGAATATCATTGTTACAAAAACCTAACCCATGCTTTTTT
GCGCTGTTGTATGCACTTATTTTGCGAATTTTCTCCAACAATAAAAACAC
AACTGTTTACCACAGGGTTCCGGAAACGAGGAAGAGACGAACCCTACACC
GGCCACTACTACCACCCATCCTTTCAGCGCGACCGTCCGGAGCTCTTGGA
CATGGTGCGTCGCACCTACCAGAACGGCGGAAAGAACGAGGGTTGCGACA
GTTCCATGGACGACGACTACTTCCAGTCTCACCCACAGCCCAAGAGGGAT
CGACCAGGTCGCGGCCATCCCGGCGAAATCGTTCCCATGCCCGATGGCCC
GCAGCAGCAGCACGGGCATCATCAATATCAGCACCCGCAGCACCCGCAAC
ATCAACCCTCGAACAAGCCTTACTCGGCGGGCATCGACGGCTCGGGCAGG
GGGGCGTCTGGCTGGGATCCCCAGCGCGTCGCCTCCGCGGACTGTTCTTC
GATCCGAGAGGATCTTAACCATGACAAGCCCCAGCGACCCTGGTTCTATT
CGGGCAGCCCCAAGACAACCGCTGCCGTAGTTCGCAAGGAGATCGCCGCT
CGCCGTTCAGGTTCGGGGACTACTTCGGAACTGGGGGTGGAGAATCCGCC
TTACGAAGGAAGAAGTAGGGTAGATGGGAATGGCGGCGGTGGCGGCGGAG
GAGGA
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Coding sequence (CDS) from alignment at H-paniculata_contig1959:5985..14289-

>mRNA_H-paniculata_contig1959.4967.1 ID=mRNA_H-paniculata_contig1959.4967.1|Name=mRNA_H-paniculata_contig1959.4967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at H-paniculata_contig1959:5985..14289- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGACGACAGAGGAGTTATACGCTGCTTTTCCGCCGACTAGGGCAGG
GCGCGGGGCGCCGTCTATGTTTCCAAGGAAACTATTCCAGATACTCACCG
TGAGCGATCGTGGAGTAATCGAGTGGGACGCGGATGGGCAGAGCTTTCAC
ATCATCAACTACAAGAATTTTGTGGAGCAGACCATGCCGCAGTTCTACAG
ACACAACAAGCTCACTTCTTTCCAGCGGCAGCTCAATCTCTACGATGGCG
ACGACAGAGGAGTTATACGCTGCTTTTCCGCCGACTAGGGCAGGGCGCGG
GGCGCCGTCTATGTTTCCAAGGAAACTATTCCAGATACTCACCGTGAGCG
ATCGTGGAGTAATCGAGTGGGACGCGGATGGGCAGAGCTTTCACATCATC
AACTACAAGAATTTTGTGGAGCAGACCATGCCGCAGTTCTACAGACACAA
CAAGCTCACTTCTTTCCAGCGGCAGCTCAATCTCTACGGGTTCCGGAAAC
GAGGAAGAGACGAACCCTACACCGGCCACTACTACCACCCATCCTTTCAG
CGCGACCGTCCGGAGCTCTTGGACATGGTGCGTCGCACCTACCAGAACGG
CGGAAAGAACGAGGGTTGCGACAGTTCCATGGACGACGACTACTTCCAGT
CTCACCCACAGCCCAAGAGGGATCGACCAGGTCGCGGCCATCCCGGCGAA
ATCGTTCCCATGCCCGATGGCCCGCAGCAGCAGCACGGGCATCATCAATA
TCAGCACCCGCAGCACCCGCAACATCAACCCTCGAACAAGCCTTACTCGG
CGGGCATCGACGGCTCGGGCAGGGGGGCGTCTGGCTGGGATCCCCAGCGC
GTCGCCTCCGCGGACTGTTCTTCGATCCGAGAGGATCTTAACCATGACAA
GCCCCAGCGACCCTGGTTCTATTCGGGCAGCCCCAAGACAACCGCTGCCG
TAGTTCGCAAGGAGATCGCCGCTCGCCGTTCAGGTTCGGGGACTACTTCG
GAACTGGGGGTGGAGAATCCGCCTTACGAAGGAAGAAGTAGGGTAGATGG
GAATGGCGGCGGTGGCGGCGGAGGAGGAGGTTCCGGAAACGAGGAAGAGA
CGAACCCTACACCGGCCACTACTACCACCCATCCTTTCAGCGCGACCGTC
CGGAGCTCTTGGACATGGTGCGTCGCACCTACCAGAACGGCGGAAAGAAC
GAGGGTTGCGACAGTTCCATGGACGACGACTACTTCCAGTCTCACCCACA
GCCCAAGAGGGATCGACCAGGTCGCGGCCATCCCGGCGAAATCGTTCCCA
TGCCCGATGGCCCGCAGCAGCAGCACGGGCATCATCAATATCAGCACCCG
CAGCACCCGCAACATCAACCCTCGAACAAGCCTTACTCGGCGGGCATCGA
CGGCTCGGGCAGGGGGGCGTCTGGCTGGGATCCCCAGCGCGTCGCCTCCG
CGGACTGTTCTTCGATCCGAGAGGATCTTAACCATGACAAGCCCCAGCGA
CCCTGGTTCTATTCGGGCAGCCCCAAGACAACCGCTGCCGTAGTTCGCAA
GGAGATCGCCGCTCGCCGTTCAGGTTCGGGGACTACTTCGGAACTGGGGG
TGGAGAATCCGCCTTACGAAGGAAGAAGTAGGGTAGATGGGAATGGCGGC
GGTGGCGGCGGAGGAGGA
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