prot_H-paniculata_contig1958.4964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A1J3IYK5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IYK5_NOCCA) HSP 1 Score: 72.0 bits (175), Expect = 5.500e-12 Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSA-----DKPSEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDS 122
MKD+G SR+L ++I RDR GT+ +SQ YI +V K +T + P + + + EAV + +LMYA IG+RPDIAYAV ++R + +P R+ ++ K ++ L S
Sbjct: 115 MKDMGKASRILGMDIIRDRERGTLQLSQESYIEKVLKTFGMTEAKPTTTPLATHFRLKSLTKDERKEEAVHMEDTPYASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWTAVKWVLRYLRGS 241
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A1J3DQ82_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DQ82_NOCCA) HSP 1 Score: 71.2 bits (173), Expect = 6.940e-12 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSA-----DKPSEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDS 122
MKD+G SR+L ++I RDR GT+ +SQ YI +V K +T + P + + + EA + +LMYA IG+RPDIAYAV ++R + +P R+ ++ K ++ L S
Sbjct: 25 MKDMGKASRILGMDIIRDREKGTLQLSQESYIEKVLKTFGMTEAKPTSTPLATHFRLKSLSKDERKEEAAHMENTPNASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWTAVKWVLRYLRGS 151
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2K0I3_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K0I3_9BRAS) HSP 1 Score: 70.9 bits (172), Expect = 1.750e-11 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSAD--KPSEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDS 122
MKD+G+ SR+L I+I+RDR GT+ +SQ YI +V + ++ + + P A S + E V +I ++MYA +GTRPD+AYA+ V+R + P + K ++ L S
Sbjct: 1041 MKDMGAASRILGIDIKRDREKGTLCLSQSRYIEKVIQRFNMSGAKIVTTPIGAHFRLSSTKEDEEGVDIEIVPYSSAVGSIMYAMVGTRPDVAYAIGLVSRFMSKPGAVHWEAVKWLLRYLRSS 1164
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A1J3I7B7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I7B7_NOCCA) HSP 1 Score: 70.5 bits (171), Expect = 1.840e-11 Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSA-----DKPSEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVL 119
MKDLG SR+L ++I RDR GT+ +SQ YI +V K +T + + P + + + EA+ + +LMYA IG+RPD+A+AV ++R + +P R+ ++ K ++ L
Sbjct: 96 MKDLGKASRILGMDIIRDREKGTLKLSQENYIEKVLKAFGMTEAKPTITPLATHFRLKSLTKDERKEEAIHMEGTPYASAVGSLMYAMIGSRPDLAFAVGVISRFMSNPGRDHWTAVKWVLRYL 219
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2KTV0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KTV0_9BRAS) HSP 1 Score: 70.1 bits (170), Expect = 1.980e-11 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSADKP--SEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDSL 123
MKDLG+ SR+L I+I R+R GT+ +SQ GY+++V + + + + P A S E V +++ ++MYA IGTRPDIAYA+ V+R + P + K ++ L S+
Sbjct: 37 MKDLGAASRILGIDITRNRKEGTLCLSQSGYLKKVIQRFNMGEAKVVSTPIGAHFKLYSVQDDSECVDTELVPYNSAVGSIMYAMIGTRPDIAYAIGLVSRFMSKPGDIHWEAVKWLLRYLKGSV 161
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2J0E6_9BRAS (Uncharacterized protein n=3 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0E6_9BRAS) HSP 1 Score: 70.1 bits (170), Expect = 3.250e-11 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPGSADKP--SEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDSL 123
MKDLG+ SR+L I+I R+R GT+ +SQ GY+++V + + + + P A S E V +++ ++MYA IGTRPDIAYA+ V+R + P + K ++ L S+
Sbjct: 1062 MKDLGAASRILGIDITRNRKEGTLCLSQSGYLKKVIQRFNMGEAKVVSTPIGAHFKLYSVQDDSECVDTELVPYNSAVGSIMYAMIGTRPDIAYAIGLVSRFMSKPGDIHWEAVKWLLRYLKGSV 1186
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2JMB2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JMB2_9BRAS) HSP 1 Score: 68.9 bits (167), Expect = 8.240e-11 Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAP-------GSADKPSEPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVL 119
MKDLG SR+L ++I RDR GT+ +SQ YI +V K + ++ P S K + E V + +LMYA IG+RPD+AYAV ++R + +P RE ++ K ++ L
Sbjct: 1160 MKDLGKASRILGMDIIRDREKGTLKLSQESYIEKVLKAFDMADAKSTTTPLATHFKLKSLTKAERKE--EVVHMENKPYASAVGSLMYAMIGSRPDLAYAVGVISRFMSNPGREHWTAVKWVLRYL 1283
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD) HSP 1 Score: 68.2 bits (165), Expect = 1.520e-10 Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAP-GSADKPSEPKPLEAVLSDINAGEQES-STLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDS 122
MKD+G SR+L I+I+RDR T+ + Q GYI++V K ++ +A+ P GS K + K + + + ++MYA +GTRPD+AYA+ V+R + P + K ++ L S
Sbjct: 1061 MKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKVPYLSAVGSVMYAMVGTRPDVAYALGLVSRFMSKPGSIHWEAVKWLLRYLRGS 1184
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2HSU5_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HSU5_9BRAS) HSP 1 Score: 68.2 bits (165), Expect = 1.520e-10 Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAP-GSADKPSEPKP-LEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDSL 123
MKDLG+ SR+L ++I RDR GT+ +SQ Y+R+V + ++ ++ L P G K S K E V +++ ++MYA +G+RPD+AY + V+R + P + K ++ + S+
Sbjct: 1072 MKDLGAASRILGMDITRDREEGTLCLSQANYLRKVIENFRMSDAKSSLTPIGGHFKLSSVKDDEEGVDTEVIPYASVVGSIMYAMVGSRPDLAYGIGLVSRFMSKPGHIHWEAVKWLLRYIKGSV 1196
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2K295_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K295_9BRAS) HSP 1 Score: 67.4 bits (163), Expect = 1.690e-10 Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query: 1 MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAP-GSADKPS-EPKPLEAVLSDINAGEQESSTLMYASIGTRPDIAYAVHQVARRIEDPSREDFSTCKPMIMVLTDSL 123
MKDLG+ R+L +EI RDR NGT+ +SQ Y+++V + +T ++ P G+ K S + E + +++ ++MYA IG+RPD+AY + V+R + P + K ++ + SL
Sbjct: 17 MKDLGAARRILGMEIIRDRVNGTLQLSQSNYLKKVIENFRMTDSKSSQTPIGAHFKLSLVTEDEECIDTEVTPYSSAVGSIMYAMIGSRPDLAYGIGLVSRFMSKPGSIHWEAVKWLLRYIKGSL 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1958.4964.1 ID=prot_H-paniculata_contig1958.4964.1|Name=mRNA_H-paniculata_contig1958.4964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bpback to top |