mRNA_H-paniculata_contig1958.4964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 139 bits (350), Expect = 7.770e-35 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 3
Query: 498 RGPISRRLQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLR 989
+G +QY+ + L G+ +D+AGD++DRKST+G F GGA+SW S+KQ +VT S+TEAEYVAA A +A+++R +L I FG T LF DN SAI LSK H R+KHI V ++ RE + EGI++ +Y T QLA+ +TK + F++LR
Sbjct: 171 KGTAGFGIQYLCGGEEKLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEKLR 334
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 139 bits (349), Expect = 2.070e-34 Identity = 75/164 (45.73%), Postives = 104/164 (63.41%), Query Frame = 3
Query: 498 RGPISRRLQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLR 989
+G ++Y Q L GF +D+AGD +DRKST+G VF L GGA+SW S+KQ +VT S+TEAE+VAA A +A++LR +LG I + TTLF DN S I LSK H R+KHI V +Y R+ + E ++ LK+ T QL++ +TK + F+RLR
Sbjct: 203 QGTCGFGIRYKQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLR 366
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 133 bits (335), Expect = 1.730e-33 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 3
Query: 519 LQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNL 995
L Y ++N L GF+ +DWAGD +DRKST+G +F N G ISW S+KQ+ V S+ +AEY+A A+++ I++R LL +I C T +FEDN+S I+L+K H R KHI + ++ RE + + L Y Q+ +A+ LTKGLS+VKF +L NL
Sbjct: 92 LCYRKSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLNL 250
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A2K3KKY6_TRIPR (Type I inositol 145-trisphosphate 5-phosphatase 12-like protein (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KKY6_TRIPR) HSP 1 Score: 130 bits (328), Expect = 9.500e-33 Identity = 67/155 (43.23%), Postives = 103/155 (66.45%), Query Frame = 3
Query: 498 RGPISRRLQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGL 962
+G +S + Y + ++ L G+ +D+AGD +DR+ST+G VFKL AISW S+KQ +VT S+TEAE+VAA A +A++L+++L +R +ST +F DN S+I +SK H R KHI V +Y R+ +++G L LK+ T Q+A+ +TK L
Sbjct: 78 KGTMSLGILYKRGSELLLQGWTDSDYAGDIDDRRSTSGYVFKLGSSAISWSSKKQPIVTLSTTEAEFVAAASCACQAVWLKKILHQLRKDQNKSTVIFCDNSSSIKVSKNPIMHGRMKHIDVRYYFLRDLVKDGTLELKHCSTSDQIADAMTKPL 232
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A2I0AK16_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AK16_9ASPA) HSP 1 Score: 129 bits (325), Expect = 1.020e-32 Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 3
Query: 498 RGPISRRLQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNLL 998
+G + Y D L GF+ D+AGD +DRKST+G VF + GA+SW S+KQ +VT S+TEAE+VAA A +AI+LR++L ++F +TT+F DN SAI LSK H R+KHI V +Y R+ G + L Y ++ Q+A+ TK L V F +LR LL
Sbjct: 20 KGTTDFGIFYKNGGDSSLIGFSDNDYAGDIDDRKSTSGFVFMMCSGAVSWSSKKQPIVTLSTTEAEFVAATACACQAIWLRKVLKILQFKQVGATTIFCDNNSAIKLSKNPVLHGRSKHIDVKYYFLRDLSNNGTIKLVYCRSEDQVADIQTKPLKLVTFAKLRGLL 186
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 132 bits (331), Expect = 1.190e-32 Identity = 83/180 (46.11%), Postives = 106/180 (58.89%), Query Frame = 3
Query: 498 RGPISRRLQYMQ----ANDYGLD--GFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSI------RFGCRRSTTLF-EDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNLL 998
RG RL Y + ++GL G++ ADWAGD DR+ST+ VFKL GGAISWCSRKQQ + SSTEAEYVA AAK+ ++L LL + R L DN+SA+ L+K S H RTKHI V + R+ + G L ++YV TG Q+A+ LTK L+R K NLL
Sbjct: 102 RGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREKHTYFTNLL 281
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A7D9KIP6_PARCT (Uncharacterized protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KIP6_PARCT) HSP 1 Score: 128 bits (321), Expect = 1.390e-32 Identity = 64/147 (43.54%), Postives = 96/147 (65.31%), Query Frame = 3
Query: 555 GFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNL 995
GF+ ADWAGD DRKST+G F++NG A+SW S+KQ V S+ EA+YVA AA++A+++R+LL + T++EDN+SAI +SK H R+KHI + ++ R+ + + L + Y TG LA+ TKG+ + +F +LR L
Sbjct: 8 GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAKYVALSAAAQEALWMRQLLTDLNVNFDEQMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFTKLREL 154
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: UPI0009059DF2 (uncharacterized protein LOC109209787 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009059DF2) HSP 1 Score: 132 bits (333), Expect = 1.550e-32 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 3
Query: 519 LQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNLL 998
L Y + L GF +D+AGD +DR+ST+G VF L GA+S S+KQ +VT SSTEAE+VAA A +A++LR +L ++F ++TT+F DN SAI LSK H R+KHI V +Y R+ EG + L Y ++ QLA+ TK L + FQ LR LL
Sbjct: 153 LFYKKGEKSDLIGFTDSDYAGDQDDRRSTSGYVFMLGTGAVSRSSKKQSIVTLSSTEAEFVAATTCACQAVWLRRILEELKFKQEKATTIFCDNNSAIKLSKNLVLHGRSKHIDVKYYFLRDLNNEGTIELTYCRSEDQLADIFTKPLKLLSFQNLRRLL 312
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A2I0ANN3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ANN3_9ASPA) HSP 1 Score: 129 bits (323), Expect = 1.810e-32 Identity = 74/167 (44.31%), Postives = 101/167 (60.48%), Query Frame = 3
Query: 498 RGPISRRLQYMQANDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLRNLL 998
+G I L Y + L GF +D+AGD +DRKST+G VF + GAISW SRKQ +VT S+TEAE+VAA +AI+LR +L I F ST ++ DN SAI LSK H R+KHI + ++ R+ R G + L Y ++ Q+A+ TK L + F +LR L
Sbjct: 20 QGTIDYGLLYKKGEKSDLIGFTDSDYAGDLDDRKSTSGYVFFMGSGAISWSSRKQSIVTLSTTEAEFVAASACVCQAIWLRNILEEIHFKQEGSTLIYCDNISAIKLSKNPVLHGRSKHIDIKYHFLRDLTRNGTIDLIYCKSEDQVADLFTKALKQAAFLKLRKAL 186
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 130 bits (326), Expect = 3.020e-32 Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 3
Query: 537 NDYGLDGFAYADWAGDDEDRKSTAG*VFKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAAKKAIYLRELLGSIRFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVCWYRFRE*IREGILALKYVQTGGQLAETLTKGLSRVKFQRLR 989
+D + GF+ +D+A D + RKST G VF + GAI+WCSR+QQ + S+TEAEYVAA EA K+AI+LR LL I + L+ DN+SAI L K H RTKHI V ++ +E + G + ++YV++ QLA+ LTK L VKF +LR
Sbjct: 97 SDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1958.4964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1958.4964.1 >prot_H-paniculata_contig1958.4964.1 ID=prot_H-paniculata_contig1958.4964.1|Name=mRNA_H-paniculata_contig1958.4964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp MKDLGSLSRVLAIEIRRDRPNGTISISQGGYIREVSKYTVLTSVEAILAPback to top mRNA from alignment at H-paniculata_contig1958:4739..5860+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1958.4964.1 ID=mRNA_H-paniculata_contig1958.4964.1|Name=mRNA_H-paniculata_contig1958.4964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig1958:4739..5860+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1958:4739..5860+ >mRNA_H-paniculata_contig1958.4964.1 ID=mRNA_H-paniculata_contig1958.4964.1|Name=mRNA_H-paniculata_contig1958.4964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig1958:4739..5860+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |