prot_H-paniculata_contig19578.4963.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19578.4963.1
Unique Nameprot_H-paniculata_contig19578.4963.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig19578.4963.1 vs. uniprot
Match: D7FTY6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY6_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.160e-12
Identity = 40/59 (67.80%), Postives = 52/59 (88.14%), Query Frame = 0
Query:  139 MASMHTMIESKDDKIQKLKRDSDRLRREIKRLHVKGEERKGQENAIEMATTQNARLLKV 197
            M S+H +IE+KD+ +QK KR+SDRLRREIKRLHV+ EER+GQENA+ +A TQN+RLLK+
Sbjct:    1 MGSLHGVIETKDNAVQKHKRESDRLRREIKRLHVEREERQGQENAMIVAATQNSRLLKL 59          
BLAST of mRNA_H-paniculata_contig19578.4963.1 vs. uniprot
Match: A0A662XL96_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XL96_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.510e-9
Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 0
Query:  103 LIKLRDDMIEAKHHEVLLLSKQNQGLRTGIDAVETEMASMHTMIESKDDKIQKLKRDSDRLRREIKRLHVKGEERKGQENAIEMATTQNARLL 195
            LI+LRDD +EAK  E+ LLS QN  L   +D +E  +  +   + +K++ + + +R  DRL  E++ L V   + +G+E A+E+ATTQNA+LL
Sbjct:  178 LIRLRDDALEAKTRELWLLSGQNDQLHVQLDELEAALEQLQRTVLAKENDLVRRQRRVDRLEAELEALQVSRSQAEGREKAMEIATTQNAKLL 270          
BLAST of mRNA_H-paniculata_contig19578.4963.1 vs. uniprot
Match: A0A0P1AGN8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGN8_PLAHL)

HSP 1 Score: 57.8 bits (138), Expect = 2.670e-6
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  103 LIKLRDDMIEAKHHEVLLLSKQNQGLRTGIDAVETEMASMHTMIESKDDKIQKLKRDSDRLRREIKRLHVKGEERKGQENAIEMATTQNARLLK 196
            LI+LRD+ I+AK  EV LLS Q   LR  +   E+ +  +   + SK++ + + +R  +RL  EI+ L     + +G E AI +ATTQNA+LLK
Sbjct:  191 LIRLRDEAIDAKTREVWLLSGQYDRLRVQLGEQESALERLQINVTSKENDLMQQQRKINRLEAEIETLQAGLSQAEGCEKAINIATTQNAKLLK 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19578.4963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTY6_ECTSI2.160e-1267.80Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A662XL96_9STRA3.510e-940.86Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0P1AGN8_PLAHL2.670e-640.43Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19578contigH-paniculata_contig19578:137..2714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19578.4963.1mRNA_H-paniculata_contig19578.4963.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19578 137..3561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19578.4963.1 ID=prot_H-paniculata_contig19578.4963.1|Name=mRNA_H-paniculata_contig19578.4963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MSVTDQSIDSSTLTGSASTARADSDDASSVVTGRSEERDSAGSISPSPSP
SPSPSDCGKSRRSRLRTVAKAKAKAESSTRSQGRSKRTIIAPAHRTKEET
LHLIKLRDDMIEAKHHEVLLLSKQNQGLRTGIDAVETEMASMHTMIESKD
DKIQKLKRDSDRLRREIKRLHVKGEERKGQENAIEMATTQNARLLKVRSD
LMR*
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