prot_H-paniculata_contig19564.4954.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19564.4954.1
Unique Nameprot_H-paniculata_contig19564.4954.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig19564.4954.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.620e-30
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    1 MYSKFRESGVFVGGDAWYCCLEHPDSGLRSKLTLSCPLDRGRVRLRDGSKESNDTERLLDHAFGLLKQDPPVTPTLVTYKPTASPEEV 88
            MYSKFR++GVFVGGDAWYCCL+HP   LRSKL LSCP+ R     RD      DTERL DHA+GLLKQD  ++PTL+TYKPTA+ +EV
Sbjct: 1314 MYSKFRDTGVFVGGDAWYCCLDHPSIALRSKLRLSCPMRR-----RDQPPSREDTERLADHAYGLLKQDSSLSPTLLTYKPTATVDEV 1396          
BLAST of mRNA_H-paniculata_contig19564.4954.1 vs. uniprot
Match: W7TNT9_9STRA (Actin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNT9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.480e-14
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MYSKFRESGVFVGGDAWYCCLEHPDSGLRSKLTLSCPLDRGRVRLRDGSKESNDTERLLDHAFGLLKQDPPVTPTLVTYKPTASPEEVWEVV 92
            MY +FRE GVF+G DAWYC  +HPD  LR  L L  P DR R+ +R       D + LL + F   +     TP +VTYKPT++ +E  EVV
Sbjct:  946 MYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRL-IRPA-----DLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVV 1031          
BLAST of mRNA_H-paniculata_contig19564.4954.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.530e-5
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:   54 DTERLLDHAFGLLKQDPPVTPTLVTYKPTASPEEV 88
            DT RL DHA+GLLKQD  ++PTL+TYKPTA+ +EV
Sbjct:  737 DTVRLADHAYGLLKQDSSLSPTLLTYKPTATVDEV 771          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19564.4954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHM1_ECTSI1.620e-3065.91TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
W7TNT9_9STRA3.480e-1445.65Actin-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A6H5JDL2_9PHAE1.530e-568.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19564contigH-paniculata_contig19564:503..1689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19564.4954.1mRNA_H-paniculata_contig19564.4954.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19564 336..1768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19564.4954.1 ID=prot_H-paniculata_contig19564.4954.1|Name=mRNA_H-paniculata_contig19564.4954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MYSKFRESGVFVGGDAWYCCLEHPDSGLRSKLTLSCPLDRGRVRLRDGSK
ESNDTERLLDHAFGLLKQDPPVTPTLVTYKPTASPEEVWEVVAPTAFTAG
ITVMFSR*
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