prot_H-paniculata_contig1955.4951.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1955.4951.1
Unique Nameprot_H-paniculata_contig1955.4951.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length586
Homology
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.030e-93
Identity = 274/549 (49.91%), Postives = 299/549 (54.46%), Query Frame = 0
Query:   36 MQDQYLPVDVVKSTFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKKIMVDPAQEAPPSPRAGSATESISCGLDRLLLDAD---VGEXXXXXXXXXXXXXXXXXXXXAQSLSTVSFPDQTGPV-PTKIRSAPTSGSGNPPRSFEEAAAAALQPSEEATXXXXXXXXXXAIAMPKEVQARGSLVVSPPPAPLDAEAA--PVSVIPAVTL-SSKSPPKATIGRKTGPXXXXXXXXXXXXXXSGAGAVKLSGFQDPQATPTPGGRVAGAAPAAGGVDADLKLARKLQEEEDARASG-------SSLLAAATAEAFAMPPAPSSKEGGLGATAGGGSVYRSLNDSASKGSSYGXXXXXXXRSVGASSGFSSISSYXXXXXXXXXSFDKEKYKNVKGIGSDMLFGAQDDDPAEQHRRAMKTQEYSSSAAISSDMYFDRNADEGMGNA-SGGDGLGEMAEQIRLSAAVEFEGAAQAAAKLK 569
            MQDQYLP DVVKSTFRRLRSK DNKVCFDC TRNPTW+S T+GIFICYDCSAVHR+MGVHVTFVRS ELDKWKP EME MKRGGNGNAR+FF +HG+TDMEK+EQKYHSRAAQMYR+HLKK M DP    PP        ++++ GLDRL+ D D                XXXXXXXXXX  S+   +   +     P+   +APTSGS           AAA  P+  A           A   P E + RGSL VSPP AP  A  A       P V L SSKSPP     RK G    XXXXXXXXXXXSG  AVKLSGF+D                     DADL LARKL                 +                                                XXXXXXX               XXXXXXXX SFDK KYKNVKGIGSDMLFGA+DDDP EQ RRAMK QEYS SAAISSDMY              GG G G+MA+QI  SAA      AQAA KLK
Sbjct:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDGKPAASAPAKGFTNGGXXXXXXXXXXXPSVDAAAAAAKFAQAFPSSHPAAPTSGSA-----AAGGHAAADVPAPPA-----------APVKPYEPKPRGSLSVSPPTAPAAAAGAVDEPKATPVVRLISSKSPPPRI--RKGGAKKMXXXXXXXXXXXSGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXXXXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXXXXXXXXXXXXYDGGVGFGDMADQIAASAA------AQAAGKLK 525          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.880e-57
Identity = 96/161 (59.63%), Postives = 126/161 (78.26%), Query Frame = 0
Query:   35 AMQDQYLPVDVVKSTFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKKIMV---DPAQEAPPSPR-AGSATES-ISCGLDRLLLDAD 190
            A  + Y+  D+VKSTFRRL++  DNKVCFDC TRNPTW+SVT+GIF+CYDCSAVHR+MGVH+TFVRS ELDKW+  E+++MKRGGN  ARA+F +HG++DM KT+ KY SRAA+ YR+HLK+++    DPA +   S   A  A E+ I+CGLDR++ D +
Sbjct:    2 ASSNDYVEADLVKSTFRRLQAHRDNKVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIAETPDPAADVWNSAHGARDADEAAIACGLDRIMRDIE 162          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 9.040e-44
Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 0
Query:   33 VKAMQDQYLPVDVVKSTFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDME-KTEQKYHSRAAQMYRSHLKKIMVDPAQEAPPSP 169
            ++ M    +P +   S F+RL++K DN++CFDC TRNPTW+S TFG+F+C DCSA HR MGVHVTFVRS ELD+W   ++  M+ GGNGNA AFF +HG+ D+  KTE+KY S AA+ Y++HLKK++    +EAPP P
Sbjct:    8 LRTMAATCVPSEAKTSFFKRLKAKRDNRICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKKLL----EEAPPKP 141          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA)

HSP 1 Score: 167 bits (422), Expect = 7.400e-42
Identity = 83/155 (53.55%), Postives = 108/155 (69.68%), Query Frame = 0
Query:   36 MQDQYLPVDVVKSTFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDME-KTEQKYHSRAAQMYRSHLKKIM-VDPAQEAPPSPRAGSATESISCGLDRLLLD 188
            M  +Y+  +V  S F++LR+K  NKVCFDC +RNPTW+S TFGIFIC DCSA HR MGVH+TFVRS ELD+W P +++ MK GGN NA  FF +HG+ DM  K EQKY S AA+ Y++HLKK+M  +  +E P  P+   + +     +D LLLD
Sbjct:    1 MNGKYVTQEVKNSAFKKLRTKGANKVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVEEVPEEPQRKPSVD-----IDSLLLD 150          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.730e-41
Identity = 75/146 (51.37%), Postives = 104/146 (71.23%), Query Frame = 0
Query:   48 STFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKKIMVDP------AQEAPPSPRAGSATESISCGLDRLLL 187
            + F+R++S+ +N+VCFDC TRNPTW+S T+G+FICY+CSA HR++GVH+TFVRS +LD+W P ++  M+ GGN NA  FF  HG+T   K EQKY SRAA++Y++HL K++ D       A E PP     +A   + CGLD L+L
Sbjct:   12 AAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPPPPTDTVAA---VGCGLDNLML 154          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A2P5BH02_PARAD (Arf GTPase activating protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BH02_PARAD)

HSP 1 Score: 155 bits (393), Expect = 2.900e-39
Identity = 74/139 (53.24%), Postives = 97/139 (69.78%), Query Frame = 0
Query:   48 STFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHL-KKIMVDPAQEAPPSPRAGSATESISCGLDRL 185
            + FR+L++K++NK+CFDC  +NPTW+SVT+GIF+C DCSAVHRS+GVH++FVRST LD W P +++ M  GGN  A  FF  HG TD  K E KY SRAA +YR  L K++    A+EAPPS    S +   S GL  +
Sbjct:   11 AVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKMMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAADLYRQLLSKEVAKSMAEEAPPSLPVASQSGEASNGLSNI 149          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: UPI001FB0743C (probable ADP-ribosylation factor GTPase-activating protein AGD9 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0743C)

HSP 1 Score: 158 bits (399), Expect = 3.380e-39
Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 0
Query:   47 KSTFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHL-KKIMVDPAQEA--PPSPRAGSATES 177
            ++ FR+LR+K++NK+CFDC T+NP W+SVT+GIF+C DCSAVHRS+GVH++FVRST LD W P +++ M  GGN  A AFF  HG TD  K E KY SRAA++YR  L K++    A EA  P SP+A  +TES
Sbjct:   10 EAIFRKLRTKSENKMCFDCNTKNPNWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNSRAHAFFKQHGWTDAGKIEAKYTSRAAELYRQLLTKEVAKSVADEAVLPSSPKASQSTES 143          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A452YQE6_AEGTS (Arf-GAP domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YQE6_AEGTS)

HSP 1 Score: 157 bits (396), Expect = 3.510e-39
Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 0
Query:   48 STFRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKKIMVDPAQE-----APPSPRAGSATES 177
            S FR+LR+K+DNK+CFDC  +NPTW+SVT+G+F+C DCSAVHRS+GVHV+FVRST LD W P +++ M  GGN  A+AFF  HG TD  K E KY SRAA +YR  L K +   + E      PPSP A S T S
Sbjct:   29 SAFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLLLKEVSKSSTEDGNNSGPPSPVAASQTSS 163          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A1D6GD40_MAIZE (ADP-ribosylation factor GTPase-activating protein AGD10 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6GD40_MAIZE)

HSP 1 Score: 149 bits (375), Expect = 6.800e-39
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0
Query:   50 FRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKK 156
            FRRL++K +NK+CFDC  +NPTW+SVT+GIF+C DCSAVHRS+GVH+TFVRST LD W P +++ M  GGN  A AFF  HG TD  K E KY SRAA++YR  L K
Sbjct:   20 FRRLKAKPENKMCFDCNAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVEAKYTSRAAELYRQMLNK 126          
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Match: A0A4Y7IL30_PAPSO (Arf-GAP domain-containing protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IL30_PAPSO)

HSP 1 Score: 155 bits (392), Expect = 9.710e-39
Identity = 73/133 (54.89%), Postives = 95/133 (71.43%), Query Frame = 0
Query:   50 FRRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVRSTELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMYRSHLKKIMVDPAQEA---PPSPRAGSATESIS 179
            FR+L+SK++NK+CFDC  RNPTW+SVT+G+F+C DCSAVHRS+GVH++FVRST LD W P +++ M  GGNG A  FF  HG TD EK+E KY SRAA++Y+  L K +   A E    P SP A  +   I+
Sbjct:   13 FRKLKSKSENKMCFDCNARNPTWASVTYGVFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNGRALTFFKQHGWTDGEKSETKYKSRAAELYKQLLSKEVTKSASEDVCFPSSPVASQSANPIN 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1955.4951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF81_9PHAE1.030e-9349.91Arf-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YU03_9STRA2.880e-5759.63Arf-GAP domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2SFF1_9STRA9.040e-4455.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B6H1_9STRA7.400e-4253.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D0S2_9STRA8.730e-4151.37Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A2P5BH02_PARAD2.900e-3953.24Arf GTPase activating protein n=2 Tax=Cannabaceae ... [more]
UPI001FB0743C3.380e-3956.72probable ADP-ribosylation factor GTPase-activating... [more]
A0A452YQE6_AEGTS3.510e-3957.04Arf-GAP domain-containing protein n=2 Tax=Aegilops... [more]
A0A1D6GD40_MAIZE6.800e-3962.62ADP-ribosylation factor GTPase-activating protein ... [more]
A0A4Y7IL30_PAPSO9.710e-3954.89Arf-GAP domain-containing protein n=3 Tax=Papaver ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 59..78
score: 49.14
coord: 99..120
score: 39.81
coord: 78..95
score: 54.98
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 47..164
e-value: 1.2E-44
score: 164.4
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 48..151
e-value: 6.3E-33
score: 113.3
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 47..164
score: 25.804
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 35..173
e-value: 1.6E-47
score: 163.0
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 47..538
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..585
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.62
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 47..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1955contigH-paniculata_contig1955:3741..8187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1955.4951.1mRNA_H-paniculata_contig1955.4951.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1955 3725..8446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1955.4951.1 ID=prot_H-paniculata_contig1955.4951.1|Name=mRNA_H-paniculata_contig1955.4951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=586bp
MYRGRACLCVPVLLVISVWCPCRRGTYCSFRSVKAMQDQYLPVDVVKSTF
RRLRSKADNKVCFDCRTRNPTWSSVTFGIFICYDCSAVHRSMGVHVTFVR
STELDKWKPLEMEAMKRGGNGNARAFFHAHGITDMEKTEQKYHSRAAQMY
RSHLKKIMVDPAQEAPPSPRAGSATESISCGLDRLLLDADVGEGQANANG
SLAAVVGTGPGPQAQSLSTVSFPDQTGPVPTKIRSAPTSGSGNPPRSFEE
AAAAALQPSEEATAVAAAKVAAAAIAMPKEVQARGSLVVSPPPAPLDAEA
APVSVIPAVTLSSKSPPKATIGRKTGPKKMGARKLGAMKLGSGAGAVKLS
GFQDPQATPTPGGRVAGAAPAAGGVDADLKLARKLQEEEDARASGSSLLA
AATAEAFAMPPAPSSKEGGLGATAGGGSVYRSLNDSASKGSSYGYGNGEG
SRSVGASSGFSSISSYGGGGSSSSASFDKEKYKNVKGIGSDMLFGAQDDD
PAEQHRRAMKTQEYSSSAAISSDMYFDRNADEGMGNASGGDGLGEMAEQI
RLSAAVEFEGAAQAAAKLKVCILRRCFSHRAMCSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO