mRNA_H-paniculata_contig19543.4949.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19543.4949.1
Unique NamemRNA_H-paniculata_contig19543.4949.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 4.770e-79
Identity = 124/143 (86.71%), Postives = 136/143 (95.10%), Query Frame = 1 
Query:    1 MYMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            MYM LFL+YW WSLLSFW+SLRDA DMHHLYTTRLRI+  DLH+IEWSEVV+RFL+LQNTGLYRVAI+TN+VTAHDIASRIMRKENYLIAMLNK ILKLSLPLPFFGSRG GTLWA+TG+QYLTKSLEWS+HFCVLNHMFS+K
Sbjct:  106 MYMVLFLVYWAWSLLSFWSSLRDATDMHHLYTTRLRISRTDLHTIEWSEVVSRFLSLQNTGLYRVAIYTNNVTAHDIASRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFSDK 248
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 3.250e-78
Identity = 124/143 (86.71%), Postives = 136/143 (95.10%), Query Frame = 1 
Query:    1 MYMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            MYM LFL+YW WSLLSFW+SLRDA DMHHLYTTRLRI+  DLH+IEWSEVV+RFL+LQNTGLYRVAI+TN+VTAHDIASRIMRKENYLIAMLNK ILKLSLPLPFFGSRG GTLWA+TG+QYLTKSLEWS+HFCVLNHMFS+K
Sbjct:  115 MYMVLFLVYWAWSLLSFWSSLRDATDMHHLYTTRLRISRTDLHTIEWSEVVSRFLSLQNTGLYRVAIYTNNVTAHDIASRIMRKENYLIAMLNKEILKLSLPLPFFGSRGRGTLWATTGRQYLTKSLEWSMHFCVLNHMFSDK 257
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: W7TMH9_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.940e-30
Identity = 69/155 (44.52%), Postives = 99/155 (63.87%), Query Frame = 1 
Query:    4 YMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLP------------FFGSRG-SGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            Y  LFLLYW  S   F  +L+DA++M  +YT RL I   +L S+EW +VV RFLA   +G YRV+IH  ++TA DIA+RIMR+EN+L+A++++ +L L LP P              G  G  G +     +++LT++L+WS+H CVLN MF+EK
Sbjct:  241 YCLLFLLYWCVSCYWFLLTLKDAVEMRAVYTERLGIRDEELGSLEWHQVVERFLARHRSGEYRVSIH-GEITAQDIAARIMRRENFLVALIHRRVLDLVLPRPAVLVSEVAAAGGMAGPGGREGRVPPRPQEEFLTRNLQWSLHVCVLNDMFTEK 394
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A4D9D5X3_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5X3_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.270e-30
Identity = 69/155 (44.52%), Postives = 99/155 (63.87%), Query Frame = 1 
Query:    4 YMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLP------------FFGSRG-SGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            Y  LFLLYW  S   F  +L+DA++M  +YT RL I   +L S+EW +VV RFLA   +G YRV+IH  ++TA DIA+RIMR+EN+L+A++++ +L L LP P              G  G  G +     +++LT++L+WS+H CVLN MF+EK
Sbjct:  237 YCLLFLLYWGVSCYWFLLTLKDAVEMRTVYTERLGIRDEELGSLEWHQVVERFLARHRSGEYRVSIH-GEITAQDIAARIMRRENFLVALIHRRVLDLVLPRPAVLVSEVAAAGGMAGPGGREGRVPPRPQEEFLTRNLQWSLHVCVLNDMFTEK 390
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A7S3XNV8_HETAK (Autophagy-related protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNV8_HETAK)

HSP 1 Score: 120 bits (301), Expect = 3.870e-29
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1 
Query:    1 MYMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFS 423
            +Y  LF L+W   L++F   LR        Y   LR+ P +L + EW EVV R   LQ  G YR        TA D+A R++R+ENYL+A++N G+L LS+PLPF G+ G GT  A T   YLT++LEWS+H C+L+ MF+
Sbjct:  248 LYATLFGLWWCHDLVAFLLGLRALGKTAAFYRDALRLGPRELPAAEWHEVVFRLAELQRAGRYRFGPAPTPPTAQDVAGRVLRRENYLVALVNCGVLDLSVPLPFLGAVGRGTWAARTEGFYLTRTLEWSIHHCLLHQMFA 388
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A836CNL2_9STRA (Autophagy protein Apg9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.210e-27
Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 1 
Query:  109 ITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIA--------------------SRIMRKENYLIAMLNKGILKLSLPLPFFGS-RGSGTLWASTGQQY----LTKSLEWSVHFCVLNHMFSEK 429
            I+  DL ++EWS VV RFLALQNTG YRVAIH  D+TAHDIA                    SRIMR+ENY+IA++NK +L+L +P+P  GS  G G   A T        LTKSLEWS+ FCVL+H+F+ K
Sbjct:  303 ISQRDLRTMEWSVVVQRFLALQNTGRYRVAIHRRDLTAHDIAXXXXXXXXXXXXXXXXXXXXSRIMRRENYIIALVNKRVLQLGVPIPSLGSILGGGRARAHTHAHARTPRLTKSLEWSLRFCVLSHLFNHK 434
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A7S0L280_9EUKA (Autophagy-related protein 9 (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L280_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 7.570e-26
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:   16 FLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            F LYW+W LL F+  +R  ++M   Y  +L I   DL  I W  VV R + LQ T   R+ I  + +TAHDIA+RI+RKEN+++A +N+G+L L LP               T    LTK+LEW+V FC+L  MF  +
Sbjct:   43 FSLYWLWMLLHFFWDMRSLLEMRAFYRDKLYIVDADLQVISWDVVVQRIVELQATS--RLCIVKDQLTAHDIANRILRKENFMVAFVNRGLLPLELP-------------GLTSLNMLTKTLEWNVSFCILEAMFDSE 165
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: F0YN89_AURAN (Autophagy-related protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN89_AURAN)

HSP 1 Score: 111 bits (277), Expect = 1.050e-25
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   25 YWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK 429
            YW+WS  + W SLR+A ++   Y   L I+  +L ++ W+EV+    +   TG       +  +TAHDIA RIMRKENYLIAMLN   L L+LPLP   +    +L     +  LTK+LEWS+H C+L+H+FS +
Sbjct:  103 YWLWSCGATWFSLREAWEIGRFYELELEISSRELRTLRWNEVMLPHGSTPGTGSLN---KSTMITAHDIACRIMRKENYLIAMLNANTLDLTLPLPTLFTGRVSSLDTIAARARLTKTLEWSIHSCLLDHIFSRR 234
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A7S0WMX6_9CHLO (Autophagy-related protein 9 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WMX6_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 1.170e-25
Identity = 56/139 (40.29%), Postives = 89/139 (64.03%), Query Frame = 1 
Query:    4 YMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMF 420
            Y+ +F LYW+W++L F   +R  +D+H     +L +T  ++ ++ WSE+V R +  Q++   R+ +   +++A DI SRIMRKEN+LI MLNK +L L+LPLP  GSR             LTK LEW++++C+L++MF
Sbjct:   54 YLIIFSLYWIWTVLRFLLEIRPLLDIHRFCCIKLGLTVREIQTMGWSELVNRIVQAQSS--MRLCV-VKELSALDIVSRIMRKENFLIGMLNKDVLCLNLPLPLVGSR-----------VMLTKILEWNLYWCILDYMF 178
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BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Match: A0A7S1C783_9STRA (Autophagy-related protein 9 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C783_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.220e-25
Identity = 65/139 (46.76%), Postives = 88/139 (63.31%), Query Frame = 1 
Query:    4 YMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEVVTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLSLPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMF 420
            Y  LF LYWV + L+F  ++  A  MH  Y  RLRIT  +L +++W EVVTRF  LQ +G YRVA+   +VTAH IA RIMRK+NY++A++NK +L LSL +P        T W       LTKSLEW++   + +HM+
Sbjct:  257 YFSLFSLYWVMTALAFIPAVFGAWRMHVFYRDRLRITTRELQTMQWHEVVTRFEQLQRSGSYRVAL--KEVTAHSIAMRIMRKDNYMVALVNKDMLDLSLRVPC-------TSWRL--HTPLTKSLEWNLDIALFSHMW 384
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19543.4949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9U8_9PHAE4.770e-7986.71Autophagy-related protein 9 n=1 Tax=Ectocarpus sp.... [more]
D7FZF2_ECTSI3.250e-7886.71Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
W7TMH9_9STRA3.940e-3044.52Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A4D9D5X3_9STRA8.270e-3044.52Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A7S3XNV8_HETAK3.870e-2944.68Autophagy-related protein 9 (Fragment) n=1 Tax=Het... [more]
A0A836CNL2_9STRA1.210e-2750.76Autophagy protein Apg9-domain-containing protein n... [more]
A0A7S0L280_9EUKA7.570e-2641.30Autophagy-related protein 9 (Fragment) n=1 Tax=Coc... [more]
F0YN89_AURAN1.050e-2542.96Autophagy-related protein 9 n=1 Tax=Aureococcus an... [more]
A0A7S0WMX6_9CHLO1.170e-2540.29Autophagy-related protein 9 (Fragment) n=1 Tax=Pyr... [more]
A0A7S1C783_9STRA1.220e-2546.76Autophagy-related protein 9 n=1 Tax=Bicosoecida sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19543contigH-paniculata_contig19543:718..4762 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.6
Seed ortholog evalue8.5e-67
Seed eggNOG ortholog2880.D7FZF2
Preferred nameATG9A
KEGG koko:K02349,ko:K17907,ko:K19672
KEGG TC9.A.15.1
KEGG Pathwayko04136,ko04137,ko04138,ko04140,map04136,map04137,map04138,map04140
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000045,GO:0000139,GO:0000272,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0001817,GO:0001818,GO:0001894,GO:0001932,GO:0001934,GO:0002165,GO:0002376,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007552,GO:0007586,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009251,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010498,GO:0010562,GO:0010604,GO:0010623,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0012501,GO:0012505,GO:0012506,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016052,GO:0016192,GO:0016236,GO:0016237,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019954,GO:0022411,GO:0022600,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030054,GO:0030154,GO:0030163,GO:0030277,GO:0030587,GO:0030659,GO:0031090,GO:0031152,GO:0031153,GO:0031224,GO:0031288,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032258,GO:0032268,GO:0032270,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032588,GO:0032648,GO:0032688,GO:0032872,GO:0032874,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034599,GO:0034613,GO:0034727,GO:0035069,GO:0035096,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042592,GO:0042594,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043632,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044804,GO:0044805,GO:0045087,GO:0045937,GO:0046328,GO:0046330,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051603,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055037,GO:0055114,GO:0060033,GO:0060249,GO:0060255,GO:0060729,GO:0061709,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070302,GO:0070304,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071704,GO:0071840,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090382,GO:0090702,GO:0097708,GO:0098542,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1902533,GO:1903008,GO:1905037
EggNOG free text desc.process utilizing autophagic mechanism
EggNOG OGsKOG2173@1,KOG2173@2759
EC2.7.7.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029,ko03036,ko03400,ko04131
Exons3
Model size429
Cds size429
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19543.4949.1prot_H-paniculata_contig19543.4949.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19543 718..4762 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929483.3240757-CDS-H-paniculata_contig19543:717..8641622929483.3240757-CDS-H-paniculata_contig19543:717..864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 718..864 +
1691480881.3689034-CDS-H-paniculata_contig19543:717..8641691480881.3689034-CDS-H-paniculata_contig19543:717..864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 718..864 +
1622929483.3355324-CDS-H-paniculata_contig19543:3470..35591622929483.3355324-CDS-H-paniculata_contig19543:3470..3559Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 3471..3559 +
1691480881.379848-CDS-H-paniculata_contig19543:3470..35591691480881.379848-CDS-H-paniculata_contig19543:3470..3559Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 3471..3559 +
1622929483.3476315-CDS-H-paniculata_contig19543:4569..47621622929483.3476315-CDS-H-paniculata_contig19543:4569..4762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 4570..4762 +
1691480881.3923018-CDS-H-paniculata_contig19543:4569..47621691480881.3923018-CDS-H-paniculata_contig19543:4569..4762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19543 4570..4762 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19543.4949.1

>prot_H-paniculata_contig19543.4949.1 ID=prot_H-paniculata_contig19543.4949.1|Name=mRNA_H-paniculata_contig19543.4949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MYMFLFLLYWVWSLLSFWASLRDAIDMHHLYTTRLRITPMDLHSIEWSEV
VTRFLALQNTGLYRVAIHTNDVTAHDIASRIMRKENYLIAMLNKGILKLS
LPLPFFGSRGSGTLWASTGQQYLTKSLEWSVHFCVLNHMFSEK
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mRNA from alignment at H-paniculata_contig19543:718..4762+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19543.4949.1 ID=mRNA_H-paniculata_contig19543.4949.1|Name=mRNA_H-paniculata_contig19543.4949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4045bp|location=Sequence derived from alignment at H-paniculata_contig19543:718..4762+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACATGTTCCTGTTTCTCCTGTACTGGGTGTGGTCTCTGCTATCCTT
CTGGGCCTCTCTGCGGGACGCGATAGACATGCACCACCTCTACACCACCA
GGCTGCGTATCACGCCCATGGACCTCCACAGCATCGAATGGAGCGAGGTA
ATCAATATTATATAACCTCTTTCCTTGAGCTCTAAATTGAAACCTCACCT
CGTACAGTGACAACCGTATCATACATCTTTATATTATTTATTTATTTTCT
ACACTTTAGTCTAGTTTCTCGGACTCGCGGTCAAGGAACACAACTTCCCT
GAAGCAACACCACCGTAGTCGGGCTGTGTATCGATCATCTGAAAGCATAC
AAATACATCGGTCGGTCGGTGAAACCGATATGTCGATACATGACCGATCT
CTCGGTGGAGTCTATATTATATGAAGGTGAGGTATCGGTGCAAGCGAAGC
GAGCTGGCTGCGCGAAGCGCCAAGCGAGCGCTTCAGCGCGAGCCCAAACG
CCCTCCCCCGCCGGCTGGCGATAAGGCCTTGCCGAATGCGCCGTCGGAGG
CGGTAAAATTACCCATTTTGGCTTCATCTTGCTTCAAAATCGAGGATTTC
GAGTACTGTACCTACACAAGGCAGCCTGAATTTGAACTGACGGAAAAATA
TTTCGAGAAAAGAGGGAATTTCCGAGCACTAAGAGATAGAAATACAAAAC
TTTGAGTTGGCAAACCTTTGGGGGGGCAGTTGAGAGCAAGAACGAGAAGA
GATCGGTCCAGGTACTATGCCATCGGGCCTGCTGTAGGTCGGGAGGGAGA
TCATGCGTGTGGTCCGCTGCTTCGCGGGGAGTCGTGTGCCACGTCGTTCG
TGTGATGATGTTCGCCTGTTAGAGTATGACCTATTATGTGTATTTTCAGT
GGACACTGACCGTACTAATCGAGAAATATATCGATACATCGGGATCAGCG
ATCGATCGATTAATGTATACGATGATTGTGGTTGTATCGCAGTGACTGCA
TTATATTACTGACCAATGTGTCCCACGACTGTACTGTACTGTACTGCATA
TATCGGTAAATACACTAAAACGGTGACCTTGTCGTATGAGCATGAGATGT
CCACTTAACAAGGACCCAACGAAGTCTTCCGCTTACAAGGCAACAGGTGA
GGCTAAAACGGGTTGTAACGCCGGTGGAATTTGGAACATTCGAATGGCTG
GCAGACAAACTCACTGCGAAGTTAGCTCGCAACGCTGCACGAGCCAGACC
TTACATTTTGTGGTATTTTTCACGTTTTATTTAATGTAAATATCGGACCA
ATACACGATGTACCGTTTTGGTATCGGTATCGATACACAGCCATAAATAC
CAGTAATAAAGCATCCGATTATAGATGAAGTAACGGCGATGGTATCTCGT
GGTGGATAATGACGAGTAAATTTTTATTTAGACATGTGGTTCTTGAACCA
GTTATTTGCTTCTAAATAGATTAGCTAGCTGGTGAGTGTACCCTCAGGTC
CAAACGTTTTTTTTTTTTTTTAATCGTCGACACATTTTTCTGTTGGATTT
AGTTTAGTAGAGCAAGAACAAGAAAGATAACGCCGGGCCGATTTTTTGGT
AATGGCTAAAGCAATTAAACAAAACCTCCACAGCATCCGGGAAGACTGGA
GCGAAGTCATCACTAACGTATAGCGAGAGGAACGAACATATATAAATAAA
TAAAAAAAAACACCCAATGACACAAAAGGTTTTTGGTCATCATCCGGTAT
GTAAATTTCTCATCTCATCCCCAGTCGAAATCAAATCATGACGAAAAACC
ACATGCAATATTGAAAGCTTACACTTGTGGGTGGACACTCGCTGGAATAT
GACAAATAGGCCGTTGTTTATCCACCATCATCATCACCACCACCATGTGG
TGCTGCGGTAACCACGCCGTCGGAAAAAAAACCCGAGCAATCGATCGAAA
ACAAAGTCGGGAACATGAAACACAGACCTTTTTTTTATTTTATTTTACTT
TTCCAATTTTGCTGAGATAAATAGATGGGCATGTCTAAACTATAGCCACG
ATTGCGGATGTAAAACAACCTCTCACATGGTGCATGGTGTACGTGCACTG
AAAACTACTTACACCCCACCCCCCCGACGAGTACGACTTCTTGGAGCATG
ACTATTCGTGTCGAGAATAACAAAGGGATTCGCCTCAAGGTTCATTTGGC
ATGAATAAGTGTATTTATTATTTGTGCCCCGGACCATCTATCTACGACTT
CTCCGAACAAGAGTAAAACGAAGAACAGGGGGTCAACACTTCACACTTGG
TGGCGAATATTTATTTATTTTGTGGCGAATGTTTTTTCATTCTCCCCGCG
AATACTCTCACAATATTCACACTCATATTGGTACTCGTCATGGGGGAGGC
GTGAAGCTATTATAGATTGAATCAAAATCGAAAATGGGTTGATACGGTTC
AACCAGCGTCCCTATGGGGTTCGTAATTTAATACGGTACGGTGGTGGTCG
TGGTTTCGATGATTTCGGAATTTTGTGCTTGAGTAGTTCCTGAAGAAGGA
AATCTTTATGCGGGAGTAGCTAGCCGCCGCTGCGAGCGCAGCAAGTCTAT
GGATCGAGCGCAAGCAAGCATGCGCTGTAACAGATGATTAGCGTAGCCAT
GGTCATTCCCCAGTACAACTGGGGTTGGTAATAACAGTCTACCCTTTCCT
CCCCTCCCTCTCCTCGTTCCTTCCTTCTGCCCGTGCGGTCGGGCGTTCAA
CAGGTGGTGACGCGCTTCCTGGCGCTGCAAAACACGGGGCTTTATCGCGT
GGCGATTCACACTAACGACGTAACGGCGCACGACATTGCTAGGTAAAGAC
GCGCGCGCGCGTGTGTATGTGATGTGTATTTTATGTCGTATGTTGCAATA
TGTTACTGGAGGGGTTCACGTGCTGACCTGCCTTCCTTCCGTCTACCGGT
CTCGTTGTGAGGGCTGATTCATATATATCACAATCGATGTTGTCGTTGTC
GTTGTTGCTATTGTTGCTTTTTTTTTTTTGCTTTTTTTTGCTTTTTTTTG
CTTTTTTTTGCTTTTTTTTGCTTTTTTTTTCGTCAAGTTTTGGATCCTTG
GTTTTTCGTGTTGTGTTGTGTTTTGTTGTGTTGTTTCGTTTCGCTTCTTG
TTTAGATCGATTGCCTCCGAGCGTGTGTGAGTGTGTTGTAAGTCATGTTT
TTTTTTGTTTTTTTTCCAAATCATATATATATATATTTTTTTTTAATGTG
CAATTTATGTTATTACTGGTAGAACCTTGAACTAGGAGTCCTTGGTTGTT
CTTGGTTTGTATGATTCTTGACTTGGTTTGTATCAAACCGTCCGTTGTAT
GCATTTAGTCAATCATCAATCCTTGGCGGGTTCCGTGCTGAACTTTCGCA
AGGTGAACATGCCGGCAGAAGGATTTGAGCCATAGCTCTAGTTGTTTGCA
GGACAAATGAGAGGCCAAGCAGAAACAAACATATATATATATATACATGG
TTGCGTGTATGTTGTTGGGTTGTTTATGTATCGAGCTCTCTCTCTATGTA
TGTATTGTTGGTTACTATTCTCGCTCGTGGTTGTTATTTGCCCGATCGGC
TGTTCTCCCGTGTTTTTATTGTTGTTGCTTTTTGTTCTTTTTGTTCTTTT
TTGTTCTTTTTGTTCTTTTCTTTTTCTTTTTTATTGTTATGTTATGTTAT
GTTATGTTATGTTATGTTATGTTATGTTATGTTATTTTCGTTTCTCTTGT
CATCACCTCTACCCAACAATGATGACAATAATATTAACCGACCAATGAAA
ACATACATCTCTGGATGATGACTGCAAACGACCATGACCACGACCACAAC
AGCCGAATTATGCGCAAGGAGAACTACTTGATCGCCATGCTGAACAAGGG
GATATTGAAGCTCTCCTTACCCCTGCCGTTCTTCGGAAGCCGCGGCAGCG
GCACTCTTTGGGCCTCCACGGGTCAGCAGTACCTCACGAAGAGCTTGGAG
TGGAGTGTCCACTTCTGCGTGCTCAATCATATGTTCAGCGAGAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig19543:718..4762+

>mRNA_H-paniculata_contig19543.4949.1 ID=mRNA_H-paniculata_contig19543.4949.1|Name=mRNA_H-paniculata_contig19543.4949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig19543:718..4762+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACATGTTCCTGTTTCTCCTGTACTGGGTGTGGTCTCTGCTATCCTT
CTGGGCCTCTCTGCGGGACGCGATAGACATGCACCACCTCTACACCACCA
GGCTGCGTATCACGCCCATGGACCTCCACAGCATCGAATGGAGCGAGATG
TACATGTTCCTGTTTCTCCTGTACTGGGTGTGGTCTCTGCTATCCTTCTG
GGCCTCTCTGCGGGACGCGATAGACATGCACCACCTCTACACCACCAGGC
TGCGTATCACGCCCATGGACCTCCACAGCATCGAATGGAGCGAGGTGGTG
ACGCGCTTCCTGGCGCTGCAAAACACGGGGCTTTATCGCGTGGCGATTCA
CACTAACGACGTAACGGCGCACGACATTGCTAGGTGGTGACGCGCTTCCT
GGCGCTGCAAAACACGGGGCTTTATCGCGTGGCGATTCACACTAACGACG
TAACGGCGCACGACATTGCTAGCCGAATTATGCGCAAGGAGAACTACTTG
ATCGCCATGCTGAACAAGGGGATATTGAAGCTCTCCTTACCCCTGCCGTT
CTTCGGAAGCCGCGGCAGCGGCACTCTTTGGGCCTCCACGGGTCAGCAGT
ACCTCACGAAGAGCTTGGAGTGGAGTGTCCACTTCTGCGTGCTCAATCAT
ATGTTCAGCGAGAAGCCGAATTATGCGCAAGGAGAACTACTTGATCGCCA
TGCTGAACAAGGGGATATTGAAGCTCTCCTTACCCCTGCCGTTCTTCGGA
AGCCGCGGCAGCGGCACTCTTTGGGCCTCCACGGGTCAGCAGTACCTCAC
GAAGAGCTTGGAGTGGAGTGTCCACTTCTGCGTGCTCAATCATATGTTCA
GCGAGAAG
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