prot_H-paniculata_contig19534.4944.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19534.4944.1
Unique Nameprot_H-paniculata_contig19534.4944.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
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BLAST of mRNA_H-paniculata_contig19534.4944.1 vs. uniprot
Match: A0A6H5L1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1I2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.150e-10
Identity = 35/58 (60.34%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:    6 LSEETQQGESARVARELPPPPVPATGTTASSDASSVPAWRSQTSSGVDRLQNEGVDVD 63
             SEE +QG    VA  LPPPPVP  GT AS DA++ PAWRSQ+  GV  L  EGVDVD
Sbjct:  295 FSEEQKQGRGDAVAEALPPPPVPVQGTKASPDATTAPAWRSQSMDGVASLHAEGVDVD 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19534.4944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1I2_9PHAE4.150e-1060.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19534contigH-paniculata_contig19534:2879..3184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19534.4944.1mRNA_H-paniculata_contig19534.4944.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19534 2879..3184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19534.4944.1 ID=prot_H-paniculata_contig19534.4944.1|Name=mRNA_H-paniculata_contig19534.4944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
HGRAVLSEETQQGESARVARELPPPPVPATGTTASSDASSVPAWRSQTSS
GVDRLQNEGVDVDSAGKWCLADLSAPGAAESAVCPVRAVLDSGDGRSKPA
SG
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