prot_H-paniculata_contig195.4933.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig195.4933.1
Unique Nameprot_H-paniculata_contig195.4933.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.910e-60
Identity = 118/246 (47.97%), Postives = 158/246 (64.23%), Query Frame = 0
Query:    1 MRLTISQRGRLDKPYSSFVVC--------------SALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDT-RNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDL 231
            MRLT+SQR   D  Y+SFV                +  +PLSN HD+S +D FSLQ T D  DLI+FVYP++  D R  +D+ ILA  N  I+  ND I  +  G  V F S+D +I+D +   ++ +F S EH++NI+ P +P H L++KS  L+ +IRNL  S  LVN QK ++RGVS NSRV+++EL + +  IVL+ R  F +Q+GR  ++F RVQFPLR  YSLTI  SQGQTLSRIGLDL
Sbjct:  201 MRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYPDIHEDARHLNDRAILATTNISIDSCNDAISSRRHGDNVTFHSSDRLIKDHNNPASSTAFRSTEHLNNIDTPGVPPHQLQIKSDALAMLIRNLIFSEGLVNGQKVVIRGVSPNSRVVRVEL-SSDHSIVLILRTSFHAQVGRNGITFNRVQFPLRIAYSLTINNSQGQTLSRIGLDL 445          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 7.660e-59
Identity = 118/253 (46.64%), Postives = 158/253 (62.45%), Query Frame = 0
Query:    2 RLTISQRGRLDKPYSSFVVC--------------SALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRP--IVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            RL  SQR + D  Y+SFV                S L PL+N  +   ++ F L+ T D ++L+ FVYP+LS   R+++ + ILA  N  I+  NDTI    PG  V F S+DS+I DE  R   +F SPEH++ + +  IP H+L+LK+  L+ I RNLN S  LVN QK +V  VS +SRVLQ++LLT  RP  IVL+PR+ F+ ++GR  + F R QFPLR  YS+TI  SQGQTLS+IGLDLRS  F+H
Sbjct:  157 RLNKSQRDKEDPQYASFVRSIGEGSRPTVTMSDGSKLTPLNNHDNEDTANHFQLRYTTDFDELLRFVYPDLSQQSRIWNTRAILATTNHSIDRSNDTISDNRPGNYVSFFSSDSLISDEKNRRT-AFASPEHLNQLNVQGIPPHELKLKTDTLALITRNLNFSEGLVNGQKCVVLAVSASSRVLQVQLLTEERPRPIVLIPRINFQGKVGRNGICFTRKQFPLRTAYSMTINKSQGQTLSKIGLDLRSSPFAH 408          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5KXS1_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS1_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.000e-46
Identity = 105/254 (41.34%), Postives = 148/254 (58.27%), Query Frame = 0
Query:    1 MRLTISQRGRLDKPYSSFVVCSAL-------------IPLS--NEHDSSQSDQFSLQNTQDIEDLISFVYPN-LSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            MRLTISQR R D  Y++FV    +             +PL+  NE   S  DQF + NT   E+LI FVY + L+ D   F  + IL++ NA I++IN  +L  +PG  +   S D++   +   N L F +   ++ I++  +P H L LK   +  I RNLN    LVN QK IVRG S  +R++ +ELL     +VL+PR+   +++GR  ++F R+Q PLR  Y+LTI  SQGQTLS+IGLDLRS VF+H
Sbjct:    1 MRLTISQRDRKDAAYAAFVRNIGIGTQAHTTDDGIDAVPLAYINEVPDSPKDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 249          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.800e-42
Identity = 78/148 (52.70%), Postives = 110/148 (74.32%), Query Frame = 0
Query:   93 EVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPN--RPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            E K  ++DS+I+DE +  + +F +PEH++ + +  IP H+L+LKS  L+ ++RNLN +  LVN QK I++GVS NSRV+Q+ELLT +   PIVL+PR+ F +Q+GR  +SF RVQFPLR  Y++TI  SQGQTL +IGLDLRS  F+H
Sbjct:  125 EDKLPTSDSLIKDESS-TSTAFAAPEHLNQLHVSGIPPHELQLKSNGLAMLVRNLNFAEGLVNGQKCILKGVSPNSRVIQVELLTDDLPHPIVLIPRINFTAQVGRNGISFMRVQFPLRSAYAMTINKSQGQTLKKIGLDLRSSPFAH 271          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5K7Z0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z0_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.280e-39
Identity = 89/208 (42.79%), Postives = 126/208 (60.58%), Query Frame = 0
Query:    1 MRLTISQRGRLDKPYSSFVVC--------------SALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDT-RNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQ 193
            MRL +SQR   D  Y+SFV                +  +PLSN HD+S +D FSLQ T D  DLI+FVY ++  D R  +D   LA  N  I+  ND I  +  G  V F S+D++I+D +   +  +F S EH++NI+IP +P   L++KS  L+ +IRNLN S  LVN QK ++RGVS NSRV+++ELL+ +  IVL+ R+ F +Q
Sbjct:   81 MRLAMSQRDEEDPAYASFVRSIGENIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYSDIHEDARHLNDHAPLATTNTSIDSCNDAISSRRQGDNVTFHSSDTLIKDHNNPASPTAFCSTEHLNNIDIPGVPPRQLKIKSDALAMLIRNLNFSEGLVNGQKVVIRGVSPNSRVVRVELLS-DHSIVLIRRISFHAQ 287          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.250e-38
Identity = 88/206 (42.72%), Postives = 126/206 (61.17%), Query Frame = 0
Query:   34 SQSDQFSLQNTQDIEDLISFVYPN-LSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            S  DQF + NT   E+LI FVY + L+ D   F  + IL++ NA I++IN  +L  +PG  +   S D++   +   N L F +   ++ I++  +P H L LK   +  I RNLN    LVN QK IVRG S  +R++ +ELL     +VL+PR+   +++GR  ++F R+Q PLR  Y+LTI  SQGQTLS+IGLDLRS VF+H
Sbjct:  535 SPKDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 735          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5KLU2_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU2_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.750e-32
Identity = 72/171 (42.11%), Postives = 106/171 (61.99%), Query Frame = 0
Query:   68 KVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            + IL++ NA I++IN  +L  +PG  +   S D++   +   N L F +   ++ I++  +P H L LK   +  I RNLN    LVN QK IVRG S  +R++ +ELL     +VL+PR+   +++ R  ++F R+Q PLR  Y+LTI  SQGQTLS+IGLDLRS VF+H
Sbjct:  116 RAILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVWRNGIAFSRLQLPLRVRYALTINKSQGQTLSKIGLDLRSDVFTH 281          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 4.900e-28
Identity = 68/164 (41.46%), Postives = 101/164 (61.59%), Query Frame = 0
Query:   70 ILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRS 233
            IL++ NA I++IN  +L  +PG  +   S D++   +   N L F +   ++ I++  +P H L LK   +  I RNLN    LVN QK IVRG S  +R++ +ELL     +VL+PR+   +++GR  ++F R+Q PLR  Y+LTI  SQGQT+ +IGLDLRS
Sbjct:  653 ILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTVPKIGLDLRS 811          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 4.750e-27
Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 0
Query:  110 NALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            N L F +   ++ I++  +P H L LK   +  I RNLN    LVN QK IVRG S  +R++ +ELL     +VL+PR+   +++GR  ++F R+Q PLR  Y+LTI  SQGQTLS+IGLDLRS VF+H
Sbjct:  232 NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 358          
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0)

HSP 1 Score: 114 bits (285), Expect = 3.300e-26
Identity = 79/203 (38.92%), Postives = 110/203 (54.19%), Query Frame = 0
Query:   47 IEDLISFVYPNLS------CDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIV----LVPRVIFRSQIGRKS-VSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 238
            ++DLI FVYPN+       C HR      IL+  NA +  IN  IL  +P   + F S D ++ D   +    F   + ++ ++   IP HDL LK G +  IIRNLN S  LVN  K IV   S         L+T  +P +    L+PR+IF++ +   S +   R QFPL+  Y++TI  SQGQT+ R+G+DLRS VFSH
Sbjct:  159 LDDLIDFVYPNVILTEPDVCVHRA-----ILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQ---IFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPR-------LITVRKPGLSDDYLIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSH 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVN5_9PHAE1.910e-6047.97ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J9C5_9PHAE7.660e-5946.64ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXS1_9PHAE1.000e-4641.34ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5L0V2_9PHAE5.800e-4252.70ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K7Z0_9PHAE1.280e-3942.79ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JZJ6_9PHAE1.250e-3842.72ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KLU2_9PHAE2.750e-3242.11ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5L0I5_9PHAE4.900e-2841.46ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JNR7_9PHAE4.750e-2747.29ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI001E68D7A03.300e-2638.92ATP-dependent DNA helicase PIF1-like n=1 Tax=Manio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 42..162
e-value: 3.8E-19
score: 69.1
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 68..238
NoneNo IPR availablePANTHERPTHR23274:SF33coord: 68..238
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig195contigH-paniculata_contig195:24771..25526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig195.4933.1mRNA_H-paniculata_contig195.4933.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig195 24186..25526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig195.4933.1 ID=prot_H-paniculata_contig195.4933.1|Name=mRNA_H-paniculata_contig195.4933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MRLTISQRGRLDKPYSSFVVCSALIPLSNEHDSSQSDQFSLQNTQDIEDL
ISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSAD
SMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLS
GDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVS
FQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase