mRNA_H-paniculata_contig195.4933.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE) HSP 1 Score: 279 bits (714), Expect = 4.190e-86 Identity = 182/456 (39.91%), Postives = 254/456 (55.70%), Query Frame = 1
Query: 1 FDPSQQNHYAVEDEPLLTTERRPVYRTVVDAVTKSEGHPFMVDAPVGAGKTSVEE*SPQS*EALAKLS*SLPLQV*LLYNCQEVVLRVQCSYYLSTSRFSPVLYVTYGLKQNVL--TF*DVALSSYGTSF------------P*RMKFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADT-VDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFVVC--------------SALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDT-RNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDL 1278
FDPS Q YA EP LT+ +R VY VVDAV ++ PFM+DAP G GK+ E+ A+L V ++ + L++ + + P L + ++ F D+ S P + E + TL+D+ ++ +GG T+ FSGDWRQ PV + A+T V+A+ ISS L + RMRLT+SQR D Y+SFV + +PLSN HD+S +D FSLQ T D DLI+FVYP++ D R +D+ ILA N I+ ND I + G V F S+D +I+D + ++ +F S EH++NI+ P +P H L++KS L+ +IRNL S LVN QK ++RGVS NSRV+++EL + + IVL+ R F +Q+GR ++F RVQFPLR YSLTI SQGQTLSRIGLDL
Sbjct: 5 FDPSAQTAYADRFEPGLTSGQRVVYNAVVDAVRNNQPQPFMIDAPAGTGKSHTEK------VIAARLREGFTA-VLIVASTGIAALQLPGGWTAHSMFKLP-------LNEKLVDGAFCDIKSESQRAELIRKRTFIIFDELPMTHRCCIETLERTLRDIRRSEALYGGITICFSGDWRQCGPVAPFATPAETTVEASFISSDLWPKTKRMRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYPDIHEDARHLNDRAILATTNISIDSCNDAISSRRHGDNVTFHSSDRLIKDHNNPASSTAFRSTEHLNNIDTPGVPPHQLQIKSDALAMLIRNLIFSEGLVNGQKVVIRGVSPNSRVVRVEL-SSDHSIVLILRTSFHAQVGRNGITFNRVQFPLRIAYSLTINNSQGQTLSRIGLDL 445
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE) HSP 1 Score: 274 bits (700), Expect = 6.220e-83 Identity = 152/317 (47.95%), Postives = 201/317 (63.41%), Query Frame = 1
Query: 397 KFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFVVC--------------SALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRP--IVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
++ EA D TL+DL+ PFGGKT++FSGDWRQ P+V + DTVDAA ISS L V+R RL SQR + D Y+SFV S L PL+N + ++ F L+ T D ++L+ FVYP+LS R+++ + ILA N I+ NDTI PG V F S+DS+I DE R +F SPEH++ + + IP H+L+LK+ L+ I RNLN S LVN QK +V VS +SRVLQ++LLT RP IVL+PR+ F+ ++GR + F R QFPLR YS+TI SQGQTLS+IGLDLRS F+H
Sbjct: 93 RYCVEALDRTLKDLMAVDQPFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRLNKSQRDKEDPQYASFVRSIGEGSRPTVTMSDGSKLTPLNNHDNEDTANHFQLRYTTDFDELLRFVYPDLSQQSRIWNTRAILATTNHSIDRSNDTISDNRPGNYVSFFSSDSLISDEKNRRT-AFASPEHLNQLNVQGIPPHELKLKTDTLALITRNLNFSEGLVNGQKCVVLAVSASSRVLQVQLLTEERPRPIVLIPRINFQGKVGRNGICFTRKQFPLRTAYSMTINKSQGQTLSKIGLDLRSSPFAH 408
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE) HSP 1 Score: 234 bits (598), Expect = 1.190e-65 Identity = 171/487 (35.11%), Postives = 243/487 (49.90%), Query Frame = 1
Query: 1 FDPSQQNHYAVEDEPLLTTERRPVYRTVVDAVTKSEGHPFMVDAPVGAGKTSVEE*SPQS*EALAKL----------------------S*SLPLQV*LLYNCQEVVLRVQCSYYLSTSRFSPVLYVTYGLKQNVLTF*DVALSSYGTSFP*RMKFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYS----------SFVVCSAL----------------IPLSNE-----HDSSQSDQFSLQNTQDIEDLISFVYPN-LSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
FDP+Q + + E LT E+R VY TVV +VT + FM+DAP G GKT E +++KL LPL+ + V C+ + R + K +++ + ++ +S +F+ EA + TLQDL+ N N GGKTV+ SGD RQI P + G A T+DA++ISS L V RMRLTISQR R + Y VC +PL+ S DQF + NT E+LI FVY + L+ D F + IL++ NA I++IN +L +PG + S D++ + N L F + ++ I++ +P H L LK + I RNLN LVN QK IVRG S +R++ +ELL +VL+PR+ +++GR ++F R+Q PLR Y+LTI SQGQTLS+IGLDLRS VF+H
Sbjct: 276 FDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLE-------DKNVSGAMCNISAESQRAEVLR------KCDLIVWDEIPMSH---------RFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPFIKHGGPAGTIDASLISSPLWPHVQRMRLTISQRHRKNAAYVRCFCSKCRYVGMSVCXXXGIGTQAHTTANDGIDAVPLAYRLFMKFRTDSPKDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 735
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE) HSP 1 Score: 215 bits (547), Expect = 3.240e-62 Identity = 126/303 (41.58%), Postives = 170/303 (56.11%), Query Frame = 1
Query: 397 KFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFVVCSALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPN--RPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
++ EA D TL+DL++N FGGKT++FSGDWRQ P+V GS DTVDAAVISS + R+RLT SQR + D Y+SFV NV D K ++DS+I+DE + + +F +PEH++ + + IP H+L+LKS L+ ++RNLN + LVN QK I++GVS NSRV+Q+ELLT + PIVL+PR+ F +Q+GR +SF RVQFPLR Y++TI SQGQTL +IGLDLRS F+H
Sbjct: 39 RYCVEALDRTLKDLMRNDRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKHISRLRLTKSQRDKDDPAYASFVR----------------------------------------------------------NVGED-----------KLPTSDSLIKDESS-TSTAFAAPEHLNQLHVSGIPPHELQLKSNGLAMLVRNLNFAEGLVNGQKCILKGVSPNSRVIQVELLTDDLPHPIVLIPRINFTAQVGRNGISFMRVQFPLRSAYAMTINKSQGQTLKKIGLDLRSSPFAH 271
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.820e-54 Identity = 152/451 (33.70%), Postives = 217/451 (48.12%), Query Frame = 1
Query: 1 FDPSQQNHYAVEDEPLLTTERRPVYRTVVDAVTKSEGHPFMVDAPVGAGKTSVEE*SPQS*EALAKL----------------------S*SLPLQV*LLYNCQEVVLRVQCSYYLSTSRFSPVLYVTYGLKQNVLTF*DVALSSYGTSFP*RMKFAFEASDNTLQ-DLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFVVCSALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYPNLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRS 1284
FDP+Q + + E LT E+R VY TVV +VT + FM+DAP G GKT E +++KL LPL+ ++ V C+ + R + K +++ + ++ +S +F+ EA + TLQ DLL N N GGKTV+ SGD RQI PVV G A+T+DA++ISS L V RMRLTISQR R D Y+S IL++ NA I++IN +L +PG + S D++ + N L F + ++ I++ +P H L LK + I RNLN LVN QK IVRG S +R++ +ELL +VL+PR+ +++GR ++F R+Q PLR Y+LTI SQGQT+ +IGLDLRS
Sbjct: 439 FDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLE-------EKNVSGAMCNISAESQRAEVLR------KCDLIVWDEIPMSH---------RFSVEALNLTLQADLLGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRDREDAAYAS---------------------------------------------------AILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTVPKIGLDLRS 811
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.950e-52 Identity = 124/304 (40.79%), Postives = 167/304 (54.93%), Query Frame = 1
Query: 397 KFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFVVCSALIPLSNEHD--SSQSDQFSLQNTQDIEDLISFVYPN-LSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
+F+ EA + TLQDL+ N N GGKTV+ SGD RQI PVV G A+T+DA++ISS L V RMRLTISQR + + +PL+ H+ S DQF + NT E+LI FVY + L+ D F + I + D N L F + ++ I++ +P H L LK + I RNLN LVN QK IVRG S +R++ +ELL +VL+PR+ +++GR ++F R+Q PLR Y+LTI SQGQTLS+IGLDLRS VF+H
Sbjct: 93 RFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRTQAHTTTDDGIDA---VPLAYIHEVPDSPKDQFFIDNTDSFEELIDFVYQDILTADPTDFKARAIC-------------------------------LDPHD--NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 358
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: A0A6H5KXS1_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS1_9PHAE) HSP 1 Score: 167 bits (423), Expect = 8.250e-45 Identity = 105/254 (41.34%), Postives = 148/254 (58.27%), Query Frame = 1
Query: 586 MRLTISQRGRLDKPYSSFVVCSAL-------------IPLS--NEHDSSQSDQFSLQNTQDIEDLISFVYPN-LSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
MRLTISQR R D Y++FV + +PL+ NE S DQF + NT E+LI FVY + L+ D F + IL++ NA I++IN +L +PG + S D++ + N L F + ++ I++ +P H L LK + I RNLN LVN QK IVRG S +R++ +ELL +VL+PR+ +++GR ++F R+Q PLR Y+LTI SQGQTLS+IGLDLRS VF+H
Sbjct: 1 MRLTISQRDRKDAAYAAFVRNIGIGTQAHTTDDGIDAVPLAYINEVPDSPKDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSSTNATIDLINSHVLDILPGDMLTAYSCDTVDPHD---NNLDFVATADLNAIDVSGVPPHALELKLNCMVMITRNLNFKQGLVNGQKAIVRGYS--TRIVHVELLDGLSSLVLIPRIRLNAKVGRNGIAFSRLQLPLRVCYALTINKSQGQTLSKIGLDLRSDVFTH 249
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E) HSP 1 Score: 172 bits (435), Expect = 6.740e-43 Identity = 138/432 (31.94%), Postives = 209/432 (48.38%), Query Frame = 1
Query: 28 AVEDEPLLTTERRPVYRTVVDAVT-KSEGHPFMVDAPVGAGKTSVEE*SP---QS*EALAKLS*SLPLQV*LLYNCQEVVLRVQCSYYLSTSRFSPVLYVTYGLKQNVLTF*DVALSSYGTSFP*RMKFAFEASDNTLQDLLQNSNPFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLDKPYSSFV--VCSALIPLSNEHDSSQSDQFSLQNTQDIEDLISFVYP-NLSCDHRVFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSPEHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLTPNRP-IVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
A+E P LT E+ V +++AVT + E F +D P G GKT V +S A+ + S + L + + L T+ VT G Q +L + + P K E D L+D+ QN FGGK ++ +GD+RQI P++ G+ D ++A++ SS L +I+ RL R R D+ Y+ FV V +P + + N +EDL++FVYP ++ + + IL+ N I IN +LR +P V+ SADS N T + ++N+ +P H L LK G + +IRN++ + LVN K V +S+ +E P RP VL+PR+ F+ Q+ + R QFPL+ Y +TI +QGQTL ++GLDLRS VFSH
Sbjct: 1076 ALEWRPKLTEEQLSVSDAIINAVTGEDENKVFFIDGPSGTGKTVVLNYITARLRSEGAVVLCTASTGIAA--LNHLGGITAHSMFQLPLETNDPHATCGVTGG-SQRAELIRRASLIIWDEA-PMAHKVTVEILDRCLRDICQNRQAFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWPNIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLRMIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHT--DVLNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFVEKISRRF----VEARVPGRPDTVLIPRICFKFQVSNSGIEMIRRQFPLKVAYGMTINKAQGQTLDKVGLDLRSDVFSH 1497
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: UPI000BBE1442 (uncharacterized protein LOC106362971 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE1442) HSP 1 Score: 170 bits (430), Expect = 2.920e-42 Identity = 140/470 (29.79%), Postives = 228/470 (48.51%), Query Frame = 1
Query: 1 FDPSQQNHYAVEDEPLLTTERRPVYRTVVDAVTKSEGHPFMVDAPVGAGKT------------SVEE*SPQS*EALAKLS*SLPLQV*LLYNCQEVVLRVQCSYYLSTSRFSPVLYVTYGLKQNVLTF*DVALSSYGTSFP*RMKFAFEASDNTLQDLLQNSN------PFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLD-KPYSSFVV-----CSALIPLSNEHDSSQSDQFSLQNT-------QDIEDLISFVYPNLSCDHR---VFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSP-EHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLT--PNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
FD +++ + P L E+R +Y V+ +V +++G F + G GKT S ++ P + A+A L LL + R + L F V T N+ +F A P + A EA D TL+D+L S+ PFGGKTV+ GD+RQI PV+ G+ +TV+AAV S L L+ + R + D K ++ +++ +AL P + + DQ + ++ ++ L V+P+ + D++ D IL NA ++ IN +L KIPG E +F S DS +DE T P E++++++ +P H + LK GV ++RN+N + L N + IV + + RV++ E+LT P + VL+PR++ +F+R QFP+R +Y++TI SQGQTL+++ L L VF+H
Sbjct: 836 FDIAEETRIHQDLFPKLNEEQRAIYDDVMGSVLENQGKLFFIYGAGGTGKTFLYRTIISALRSSKKKVIPVASSAIAAL---------LLPGGRTAHSRFKIPLKLYEDTFCEVKNGT-----NLASFLSQADLIIWDEVPMAHRHAIEAVDRTLRDILSLSDRTALNRPFGGKTVLLGGDFRQILPVIPQGTRQETVNAAVNHSHLWNHCEIHVLSTNMRVQSDEKDFAKWILQVGDGVAALAPQKEIYTEAAEDQILIDDSLLLPVTSNPLDILCQSVFPDFTNDYKDMEKIRDSAILTPKNATVDEINTYLLSKIPGAEQEFLSYDSFAEDEKHSGEFDLTYPLEYLNSLQFSGLPAHRICLKVGVPIMLLRNINQAEGLCNGTRLIVTHLGE--RVIKAEVLTSSPRKQTVLIPRIVLSPTESNHPFTFRRRQFPVRVSYAMTINKSQGQTLAKVALYLPKPVFTH 1289
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Match: UPI000BBE7F93 (uncharacterized protein LOC106354889 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE7F93) HSP 1 Score: 159 bits (403), Expect = 4.560e-41 Identity = 108/326 (33.13%), Postives = 176/326 (53.99%), Query Frame = 1
Query: 397 KFAFEASDNTLQDLLQNSN------PFGGKTVIFSGDWRQIAPVVNVGSAADTVDAAVISSSL*TEVIRMRLTISQRGRLD-KPYSSFVV-----CSALIPLSNEHDSSQSDQFSLQNT-------QDIEDLISFVYPNLSCDHR---VFHDKVILAAANAMINVINDTILRKIPGVEVKFTSADSMIQDEDTRNALSFTSP-EHIHNIEIPSIPTHDLRLKSGVLSTIIRNLNLSGDLVNVQKGIVRGVSQNSRVLQLELLT--PNRPIVLVPRVIFRSQIGRKSVSFQRVQFPLRFTYSLTIITSQGQTLSRIGLDLRSFVFSH 1299
+ A EA D TL+D+L S+ PFGGKTV+ GD+RQI PV+ G+ +TV+AAV S L L+ + R + D K ++ +++ +AL P + + DQ + ++ ++ L V+P+ + D++ D IL NA ++ IN +L KIPG E +F S DS +DE T P E++++++ +P H + LK GV ++RN+N + L N + IV + + RV++ E+LT P + VL+PR++ + +R QFP+R +Y++TI SQGQTL+++ L L VF+H
Sbjct: 4 RHAIEAVDRTLRDILSLSDRTALNRPFGGKTVLLGGDFRQILPVIPQGTRQETVNAAVNHSHLWNHCEIHVLSTNMRVQSDEKDFAKWILQVGDGVAALAPQKEIYTEAAEDQILIDDSLLLPVTSNPLDILCQSVFPDFTNDYKDMEKIRDSAILTPKNATVDEINTYLLSKIPGAEQEFLSYDSFAEDEKHSGEFDLTYPLEYLNSLQFSGLPAHRICLKVGVPIMLLRNINQAEGLCNGTRLIVTHLGE--RVIKAEVLTSSPRKQTVLIPRIVLSPTESNHPFTLRRRQFPVRVSYAMTINKSQGQTLAKVALYLPKPVFTH 327 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig195.4933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig195.4933.1 >prot_H-paniculata_contig195.4933.1 ID=prot_H-paniculata_contig195.4933.1|Name=mRNA_H-paniculata_contig195.4933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp MRLTISQRGRLDKPYSSFVVCSALIPLSNEHDSSQSDQFSLQNTQDIEDLback to top mRNA from alignment at H-paniculata_contig195:24186..25526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig195.4933.1 ID=mRNA_H-paniculata_contig195.4933.1|Name=mRNA_H-paniculata_contig195.4933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1341bp|location=Sequence derived from alignment at H-paniculata_contig195:24186..25526+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig195:24186..25526+ >mRNA_H-paniculata_contig195.4933.1 ID=mRNA_H-paniculata_contig195.4933.1|Name=mRNA_H-paniculata_contig195.4933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig195:24186..25526+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |