mRNA_H-paniculata_contig19496.4930.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19496.4930.1
Unique NamemRNA_H-paniculata_contig19496.4930.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 3.290e-126
Identity = 237/463 (51.19%), Postives = 293/463 (63.28%), Query Frame = 2
Query:  104 RHRH----RKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAV-DSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHTTTPEGRRRLYALTYTSEGAAASPFVLPGLDEAVVDEIESVSVGWKHTIALL 1477
            RH H    R LHVYTHGEGFLG LGHG+FSA +E   V  +A+ D+R  SAGWTHSAAV    G +LVWGRP+D K  LR+N +QR+FP +V A+NA ++  EV+P PV VP+      +A+P     +S +T+                  P S +L                            P+  +A  VACSAALTVVL E G+VYCMG NRWGQCGQGP     VFEPL V G+AL +E+VVKLA+G Q  LVLCESG V+GWGKG RGQLG GD+  E L  +V LPG+ V +   XXXXXXXXXXXXXXXXX MQ  EVK +G +P++HDQL PRKVD  G R VE FCSS +T+LR ++G VLM G E DTRR V  PV+VD+P S  GSF  GFN+T+  TTT       + +++TS GA  +PF LPGL E     ++SVSVGW+HT+ L+
Sbjct:   33 RHHHQSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPL------IAKPSAASTASTITAAFHDAR------------PSSYSLPA--------------------------PSSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVGGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETME-LPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVDVGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEVDIPASEPGSFFGGFNDTIVKTTTAVDLPTFHRVSFTSAGARVTPFTLPGLAEGT--RVDSVSVGWQHTVVLV 448          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 2.430e-123
Identity = 240/480 (50.00%), Postives = 300/480 (62.50%), Query Frame = 2
Query:  104 RHRH----RKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAV-DSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHT-TTPEGRR----------------RLYALTYTSEGAAASPFVLPGLDEAVVDEIESVSVGWKHTIALL 1477
            RH H    R LHVYTHGEGFLG LGHG+FSA ++   V  +A+ D+R  SAGWTHSAAV    G +LVWGRP+D K  LR+N +QR+FP +V A+NA ++  EV+P PV VP+      MA+P     +S +T                                      A++ D   ++     P+  +A  VACSAALTVVL E G+VYCMG NRWGQCGQGP     VFEPL V G+AL +E VVKLA+GFQ  LVLCESG V+GWGKG RGQLG G +  E L  +V LPG+ V   XXXXXXXXXXXXXXXXXXXXMQ  EVK +G +P++HDQL PRKVD  G R VE FCSSF+T+LR ++G VLM G+E DTRR V  PV+VD+P S  GSF +GFN+T+  T +TP                      + +++TS GA  +PF LPG+ E     ++SVSVGW+HT+AL+
Sbjct:   17 RHHHQSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPL------MAEPAAASTASTVT--------------------------------------AALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMME-LPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEVDIPASEPGSFFSGFNDTIVKTASTPVASTITDKSTAAGGTGADLPTFHRVSFTSAGARVTPFALPGVPEGT--RVDSVSVGWQHTVALV 449          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: W7T9T9_9STRA (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9T9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 9.390e-32
Identity = 138/482 (28.63%), Postives = 193/482 (40.04%), Query Frame = 2
Query:   71 RLCCPFASLLRRHRHRKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGP---------SGPDHVFEPL---------------LVRGKALSKEK--------------------VVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG--RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEG---GIPLHHDQLLPRKVDAEGV---RYVEVFCSSFHT--VLRADNG-----EVLMCGVERDTRRMVHKPVKVDMP-----GSGKGSFLNGFNETLFHT 1324
            R+C  ++S  R   H  L  Y+ GEG++G LGHG+F     +  +D +A   I+  +AGW H+A V S GRLL++GRP+D + +L L +M +  P LVR   A     +        P + +A  +       R  +L S                  P +  L                            P G + V VACS ALT ++   GRVYCMGQN +GQCG G          SG      P                +V  + L +E+                    VV +A+GFQH +    SG  + WGKGERGQLG G   +   A +V LP   R V ++                     Q    + EG   G  L+ DQLLPR+V+  G       +V C  FHT  +LR +        + M G+    R M  K   V +P     GSG+  +  G    + HT
Sbjct:   60 RICIAYSSR-RISTHTTL--YSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFD-------SPRKGSAAFL-------REDVLLS------------------PRAFPL----------------------------PEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESXXXXXXEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHT 478          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: W7TTV1_9STRA (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTV1_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.700e-29
Identity = 129/458 (28.17%), Postives = 181/458 (39.52%), Query Frame = 2
Query:  143 EGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGP---------SGPDHVFEPL---------------LVRGKALSKEK--------------------VVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG--RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEG---GIPLHHDQLLPRKVDAEGV---RYVEVFCSSFHT--VLRADNG-----EVLMCGVERDTRRMVHKPVKVDMP-----GSGKGSFLNGFNETLFHT 1324
            +G++G LGHG+F     +  +D +A   I+  +AGW H+A V S GRLL++GRP+D + +L L +M +  P LVR   A     +        P + +A  +       R  +L S                  P +  L                            P G + V VACS ALT ++   GRVYCMGQN +GQCG G          SG      P                +V  + L +E+                    VV +A+GFQH +    SG  + WGKGERGQLG G   +   A +V LP   R V ++                     Q    + EG   G  L+ DQLLPR+V+  G       +V C  FHT  +LR +        + M G+    R M  K   V +P     GSG+  +  G    + HT
Sbjct:  158 QGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFD-------SPRKGSAAFL-------REDVLLS------------------PRAFPL----------------------------PEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESXXXXXXEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHT 555          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC)

HSP 1 Score: 116 bits (291), Expect = 4.210e-24
Identity = 126/501 (25.15%), Postives = 195/501 (38.92%), Query Frame = 2
Query:  116 RKLHVYTHGEGFLGCLGHGNFSAL-----DEVQRVDGVAAVD--IRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVR--AVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLV------------RGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASE-ELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLP-------RKVDAE------------GVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHTTT--PEGRRRLYALTYTSEGAAASPFVLPGLDEAVVDE-----IESVSVGWKHTIAL 1474
            R   VY  G G+ G  G+G F        DE +    +   D  ++  S GW H+A +    RLL+ GRP+DF   LRL  +    P+ VR  A+N+  N    +    + PI     ++                                P +        S F +    ++ D     SVS            CSAALT ++TE G+VY  G N +GQCG G +  +HV+ P               RG+      VV +A+G QH + L E G V+ WGKGERGQLG G   +E   A+ V+   RA  +                     +    + K+  + +    +LP       +KV ++            GVR   + C S HT +  D+G V   G+   T+  +H+ V++  PG      +  F+  +  TT    +GR+ L    +  E         P   + ++DE     I  +   W H++ +
Sbjct:   29 RTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLKIYDGSVKDISLGWGHTAILTEDRRLLLAGRPHDFSVLLRLRRL----PLWVRNYAINSSINEFRGLDSRSVHPIALIGRLIT-----------------------WLAIRFKYPTTELEAARRHSIFPELAEIALPDSEVPSSVS------------CSAALTAIVTESGKVYAFGLNGFGQCGIGMTS-NHVWNPSSPLRGLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQGLITTEAHTALPVK---RAFTLGEKMKPQYQTIGQVTQIDAGMIHCAALTKDNEVLIWGKHVLPLLPGDENKKVSSDARLPYILPGLPKGVRVERIACGSHHTAILLDDGSVYAAGIATHTKEPIHEAVQILPPGVVNRP-VRQFDAHMDRTTIVGADGRQVLQLHLWKDEELREFAAFTPAWVDHILDENPFAKISMIHRSWIHSVVV 485          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S3XQZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ6_HETAK)

HSP 1 Score: 105 bits (263), Expect = 1.730e-22
Identity = 74/217 (34.10%), Postives = 91/217 (41.94%), Query Frame = 2
Query:  119 KLHVYTHGEGFLGCLGHGNFS-ALDEVQRVDGVAAVD-IRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQG 763
            K  + + GEGFLGCLG GNF   L   Q V G+   + +   ++GW HSAAV   G   +WGRP+DFK  LRLNNM      L +  NAFS+  EV+  P ++ +                                       PP                                    +AVGVACSA LT V+T  GRV C GQNRWGQCG G
Sbjct:   34 KTTLLSAGEGFLGCLGTGNFEDQLISFQPVVGLPKDEKVIAIASGWAHSAAVTQAGACYIWGRPFDFKNVLRLNNMHTASRALAQLANAFSSPEEVLLAPRVMAL---------------------------------------PPXXXXXXXXXXXXXXE-------------------ATRAVGVACSAGLTAVVTSDGRVLCFGQNRWGQCGTG 192          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S2SKJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKJ4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.490e-20
Identity = 90/358 (25.14%), Postives = 136/358 (37.99%), Query Frame = 2
Query:  164 GHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPA------GPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG---RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPL--HHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEV 1204
            GHG+     + + ++ +  V     +AGW HSAA+   GRLL+WG+P++ +  LRL                                R TA+                                    S   + +F SG        ++ P  A  +   PA          V V+C A  T VL E G +   G N +GQCG G   P   F+P+   G AL  +  + +++GFQH   +  SG +  WGKGERGQLGTG   +  L +++ LP    R   +S                    M      +    P+  H DQL+PR V         V  S++HT +  ++ ++
Sbjct:    2 GHGDLEVCSKPEVIETIKDVPCTAVAAGWAHSAALAQDGRLLLWGQPFELRNVLRL--------------------------------RRTAQT-----------------------------------SGRALASFISGMNW-----LLSPNGAPGLRSVPAEFPLPSSSAPVKVSCGAGFTAVLMEDGSLLLFGLNTFGQCGNGEESPTE-FQPVQALG-ALQDQGAMDVSLGFQHAAAITRSGDIVTWGKGERGQLGTGQTVNSSLPLRITLPTDGKRFATVSCGFNHTAALREDGQVFVWGKMLSTVEDQINMRPVVTHEDQLVPRHVSLPSA-VKAVASSAYHTAILTEDHQL 284          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.000e-19
Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2
Query:  647 PAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVC-ISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKV-DAEGVRYVEVFCSSFHTVLRADNGEVLMCG 1216
            P G +A  + CSAALT+VL E GR++  G N +GQCG    G   V EP  VR  AL  + VV +A G+QH L +  SGAV+ WGKGERGQLG G    +     + L G+AV  +S                    + + E K E G     DQ++PR V  ++ V  ++  CS FHT     + ++ + G
Sbjct:  130 PEGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREG---VSEPEPVR-VALDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAVAAVSAGFNHSSALTRDGELFVWGKLLNLEGKDENG----GDQVVPRLVRTSDAVTLLQ--CSHFHTAFLTADDKIWVVG 311          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S1CCH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.850e-18
Identity = 81/306 (26.47%), Postives = 122/306 (39.87%), Query Frame = 2
Query:  110 RHRKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAV--DIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDD---------ASEELAVQVRLPGRAVCIS 994
            R +++  ++ G+G+LG LGHGN     +V  +  +A V  D+    AGW HSAA  S G  ++WGRPYDFK +LR +++    P L RA+   S R  V+   +   I    E   +       +L   +                     T    F       D+A +              G   V   C  A T+ L   G++Y  G+   GQ G G +       P+  RG  L   +V     GF H   + + G  + WGK +  QL   D          A + L  ++ LP  AV ++
Sbjct:   43 RRQRVGAFSFGKGYLGALGHGNLGDAPDVTLIRELAEVGADVTSVGAGWGHSAATTSDGAAVIWGRPYDFKQTLRTHHIHDFAPWLARALGRISGRV-VLLSTLPTRIDGADEEHFERVACGAGALTVGVTRSGRVFSVGVNFHGQCGTGATSACEF-------DWAPVASLD----------GAGIVDARCGFAHTLALAADGQLYAWGRGHRGQLGLGDTHAYKEALPVGGRGSVLEGRRVTAFDAGFSHSACVTDDGGAWVWGKMQGEQLVDADVRGARPTRIVADQLLPRRLALPAPAVAVA 330          
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A418ALH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ALH5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.240e-14
Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  128 VYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILV---------RAVNAFSNRGEVMPEPVI 418
            +Y++GEG+LG LGHGN+S+++  + +D    +D+ Q S GW+H+  VD+ G+  V+GR + FK  +R  NM R  P  +         R+V AF+     +PE V+
Sbjct:   16 LYSYGEGYLGTLGHGNYSSVEAPKALDAFDGLDLVQASTGWSHTGVVDAHGKAYVFGRTHHFKNVIRAINMHRFAPWFLDFANKVGGHRSVEAFTPVEVTLPEKVV 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG88_9PHAE3.290e-12651.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL82_ECTSI2.430e-12350.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7T9T9_9STRA9.390e-3228.63Regulator of chromosome condensation/beta-lactamas... [more]
W7TTV1_9STRA3.700e-2928.17Regulator of chromosome condensation/beta-lactamas... [more]
B7G4H9_PHATC4.210e-2425.15Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3XQZ6_HETAK1.730e-2234.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SKJ4_9STRA4.490e-2025.14Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6XTS7_9STRA6.000e-1936.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1CCH6_9STRA4.850e-1826.47Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A418ALH5_9STRA3.240e-1436.79Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19496contigH-paniculata_contig19496:19..3385 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue1.1e-102
Seed eggNOG ortholog2880.D8LL82
KEGG koko:K19607
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-24_002600.1
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons3
Model size1775
Cds size1467
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19496.4930.1prot_H-paniculata_contig19496.4930.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19496 314..3372 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929479.8309603-UTR-H-paniculata_contig19496:18..3131622929479.8309603-UTR-H-paniculata_contig19496:18..313Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19496 19..313 -
1691480879.9238586-UTR-H-paniculata_contig19496:18..3131691480879.9238586-UTR-H-paniculata_contig19496:18..313Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19496 19..313 -
1622929479.8976629-UTR-H-paniculata_contig19496:3372..33851622929479.8976629-UTR-H-paniculata_contig19496:3372..3385Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19496 3373..3385 -
1691480879.9666305-UTR-H-paniculata_contig19496:3372..33851691480879.9666305-UTR-H-paniculata_contig19496:3372..3385Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19496 3373..3385 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929479.8446574-CDS-H-paniculata_contig19496:313..5351622929479.8446574-CDS-H-paniculata_contig19496:313..535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 314..535 -
1691480879.9342318-CDS-H-paniculata_contig19496:313..5351691480879.9342318-CDS-H-paniculata_contig19496:313..535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 314..535 -
1622929479.8607032-CDS-H-paniculata_contig19496:1432..17281622929479.8607032-CDS-H-paniculata_contig19496:1432..1728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 1433..1728 -
1691480879.945483-CDS-H-paniculata_contig19496:1432..17281691480879.945483-CDS-H-paniculata_contig19496:1432..1728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 1433..1728 -
1622929479.8726985-CDS-H-paniculata_contig19496:2423..33721622929479.8726985-CDS-H-paniculata_contig19496:2423..3372Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 2424..3372 -
1691480879.9557812-CDS-H-paniculata_contig19496:2423..33721691480879.9557812-CDS-H-paniculata_contig19496:2423..3372Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19496 2424..3372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19496.4930.1

>prot_H-paniculata_contig19496.4930.1 ID=prot_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp
MLFRASSAVGPLLAPSPHSRLCCPFASLLRRHRHRKLHVYTHGEGFLGCL
GHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDF
KGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYR
DDRSSLLTSIAAAATTATTSTRAPPPVPPSNTLMTNFKSGFGQRDYASMV
DPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQG
PSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGER
GQLGTGDDASEELAVQVRLPGRAVCISSGFNHAVALLENGDAYIWGKMQH
FEVKKEGGIPLHHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEVLMC
GVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHTTTPEGRRRLYALT
YTSEGAAASPFVLPGLDEAVVDEIESVSVGWKHTIALL*
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mRNA from alignment at H-paniculata_contig19496:19..3385-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19496.4930.1 ID=mRNA_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3367bp|location=Sequence derived from alignment at H-paniculata_contig19496:19..3385- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCTCCCTCACAATGCTCTTTCGAGCCTCGTCAGCCGTAGGTCCTCTAT TAGCCCCATCCCCTCATTCCCGCTTGTGTTGCCCATTCGCTTCTCTCCTG CGACGGCATCGCCACCGCAAGCTTCACGTCTATACCCACGGCGAAGGCTT CCTGGGGTGTTTGGGACATGGGAATTTTTCTGCGTTGGATGAGGTGCAGA GAGTTGATGGCGTCGCAGCTGTGGACATACGGCAGGGTTCAGCCGGCTGG ACGCACTCTGCGGCAGTCGACTCACAGGGGCGACTGCTAGTATGGGGAAG GCCGTACGACTTCAAGGGGTCCTTGAGGCTCAACAATATGCAGCGTGTGT TCCCTATTCTCGTGCGTGCGGTCAATGCGTTCTCGAACCGTGGTGAGGTC ATGCCTGAGCCAGTCATCGTGCCCATCCGTACTACCGCGGAGGTCATGGC ACAACCCTACAGGGATGATCGCAGCAGTCTGCTTACTTCCATCGCCGCGG CTGCAACCACCGCCACTACGAGCACAAGGGCACCCCCACCAGTACCACCA TCGAACACCTTAATGACTAACTTCAAATCTGGTTTCGGACAAAGGGACTA CGCGTCCATGGTAGACCCGACACATGCCGTGTCAGTGTCCCATGGTCCTG CAGGTCCCAAAGCAGTAGGTGTCGCGTGCTCTGCAGCACTCACTGTTGTG TTGACGGAGCGCGGGCGGGTCTACTGTATGGGGCAGAACCGGTGGGGACA GTGTGGGCAGGGTCCCAGTGGGCCTGATCACGTCTTCGAGCCGCTACTAG TCCGGGGGAAGGCTCTGAGCAAGGAGAAGGTAGTAAAGCTCGCTATCGGC TTCCAACACTGTCTGGTGTTATGCGAGTCTGGAGCGGTATACGGTTGGGG TAAGGGCGAGCGCGGGCAGCTGGGGACTGGAGATGATGCGTCGGAGGAGC TTGCTGTACAAGGTGAAAAGTTATTTTTGTCTAATCTTTCCCCCATTAGA ATTCTGCCAGTTAAACGCATGCAACCTCGTATTGTTCTGTCTTGGGACCC GAGCAAGTCTTATACTCGGTGGAAGGTTAGCCGCACATTTGATGACATGG ATATACACTCATCAAATAAATAACACGAACTATAGTGTGGCAGAGAGATG AATGTGCTGTGAACATGAAATGATGAAAGATCAAACGTGGAAATAATAAC TAACGTCGCTCAGAAAGCGTGGTAGCGAAATAACGCCACGGCTAACAGTC GAGTGCTACAGACAGCATCGGTCTGTTTTGCCCCCATGTTTGATATCTTC AGTGAACGTATTTTTATTATATTTCATTCGAGGTTTGATGGCTGCAAAGT ACGATTCTATAGTTTAATCAAAATTATTTCAGGCAGTGGCCGCAGTTTTA TTTCCCCTGTAGATCGATACACCCATATTCTATATCCTTTACATCGAATT ACACACTTTTTTGCCGCTCATCTTGCAAATACGATGCTTTGAAAGTTAAT GATTCCTGATCCATCTTTTCCTCTTCGGTCCTGAGTGGAGTTGGCTTTGA GCACCCATAACGAACATATTATGTGCGGTGCTTCAACAGGTGTCCTCAAA CGTGCCCCTCTTGTCGCACCCCTCCTTCTCCGTTCACGTCGTCCCTGCTG TCAACAGTTCGATTACCTGGCAGAGCCGTTTGTATTAGTAGTGGCTTCAA CCATGCTGTCGCATTGCTAGAAAATGGTGATGCCTACATCTGGGGGAAGA TGCAGCACTTCGAGGTGAAGAAAGAAGGCGGCATTCCTCTTCACCATGAC CAATTACTCCCGCGCAAGGTAGACGCAGAAGGGGTTCGATATGTAGAGGT GTTTTGTTCTTCATTTCACACGGTGCTGCGTGCGGATAATGGTGAAGTGC TAATGTGCGGAGTTGAGCGAGATACGCGGAGAATGGTGCACAAACCGGTC AAGGTGAGGCGAGGGGAATGTAATTTTGACCAAAGTCCACCGACCCGAAT TTCTCTCTTCCAACTAAAATGGTTGCGTGTGGGACACGCGTGAAAATGGG AAATCGTGAAGCTCAGTCCTGACCATGCCTGTTTGGTGTGAAGCGTCTGT TGCTCCAAATGTCCAAACTTGAACGACTTTGCCCAATGATGTGACGGGCA ATTTTCAATTTGCCCCATCACTCGAGGCAAGCAGACATACAAGATGAAGG TAGAAAGCAAAAATGTCACAAACCGAGCTGGGATGCGAATGCGTGGTTTA CACAGGCCGCGGTATCGCTCTCCTGTCCCTAAGCGCACTCAGAGGTCGCC GGAGGCCAACCTTGATTGGTTAATGTCCCTCCGCCCTTGTTTCATGATGT CAAAGCGCAGCAGAAAGCTCTAGATCAATCCACGGTGCACGCGTTCGACT AGCTGTCGGGTTCGTCCTGACGCGGGTCCGCACCGCATCGGCTCTATATT CCCATCCTTGGACGATGTTGCATTTTCTGGGGTATCTGTATTTTCTTTCT GAGAGGATGAGATACCGAGAAGGGAAGCTATTACGTGTCGGGGAATAACC ATAGAGCGTACATCTTGTCTTCATAACTCCTTATAGGTACTTGAAGTCCG CCGTTGTTGAAACATGAACGGCTATGAGTCGGCTTATGTCATTGTGACAC CTGACAATTGACACAAGCTCCCACAGCGGACCAAGAGGCAGAGGGGTCAC CGAGGTGCCCACGTTGAAAACGTGCCCCTGTTTCAACACGTGCACTGTCG CTGTCGCATATTCGGACGTGTAGTCCGTTTTCGAATAATGTTCCGACCGC CCCCCCCCGTCCCCCACCCCCTTTGTTTTCTTTACATGCACACACCGCAG GTTGACATGCCCGGCTCGGGGAAAGGTTCCTTCCTCAATGGCTTCAACGA GACGTTGTTTCACACCACTACGCCCGAGGGTAGGCGACGGTTATATGCGC TCACCTATACAAGCGAGGGTGCCGCGGCTTCTCCGTTTGTGTTGCCTGGA CTTGATGAAGCGGTCGTCGATGAAATAGAGAGCGTGTCTGTGGGATGGAA GCACACTATCGCCCTCTTGTAACAGTAGGTGGTTTCCTCGATAACATTCA ACGTTTCATTATTTTCATGTTGTACCTGATTTTATACGAGCCATTCGTGA AGGGTCTTTCGGGATTCCGGCGTGGGCCGAGTGTCATCACATTTCAAACG CCGGTATCCTCCCCGGTCGTGTAGATAGTGTTGGTCCGACGAGGAGCAGA CGTTAATCCGTTTGATCATCTGTTTTTTTGTTTTTTTTTAACCCCCGGAA GGTCAGGCAAAAAACCCTTTCCGCTGCTTCCACTCTTCGGAAGATTTCTG AGTGTCTGCATTTCCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig19496:19..3385-

>mRNA_H-paniculata_contig19496.4930.1 ID=mRNA_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig19496:19..3385- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCTTTCGAGCCTCGTCAGCCGTAGGTCCTCTATTAGCCCCATCCCC
TCATTCCCGCTTGTGTTGCCCATTCGCTTCTCTCCTGCGACGGCATCGCC
ACCGCAAGCTTCACGTCTATACCCACGGCGAAGGCTTCCTGGGGTGTTTG
GGACATGGGAATTTTTCTGCGTTGGATGAGGTGCAGAGAGTTGATGGCGT
CGCAGCTGTGGACATACGGCAGGGTTCAGCCGGCTGGACGCACTCTGCGG
CAGTCGACTCACAGGGGCGACTGCTAGTATGGGGAAGGCCGTACGACTTC
AAGGGGTCCTTGAGGCTCAACAATATGCAGCGTGTGTTCCCTATTCTCGT
GCGTGCGGTCAATGCGTTCTCGAACCGTGGTGAGGTCATGCCTGAGCCAG
TCATCGTGCCCATCCGTACTACCGCGGAGGTCATGGCACAACCCTACAGG
GATGATCGCAGCAGTCTGCTTACTTCCATCGCCGCGGCTGCAACCACCGC
CACTACGAGCACAAGGGCACCCCCACCAGTACCACCATCGAACACCTTAA
TGACTAACTTCAAATCTGGTTTCGGACAAAGGGACTACGCGTCCATGGTA
GACCCGACACATGCCGTGTCAGTGTCCCATGGTCCTGCAGGTCCCAAAGC
AGTAGGTGTCGCGTGCTCTGCAGCACTCACTGTTGTGTTGACGGAGCGCG
GGCGGGTCTACTGTATGGGGCAGAACCGGTGGGGACAGTGTGGGCAGGGT
CCCAGTGGGCCTGATCACGTCTTCGAGCCGCTACTAGTCCGGGGGAAGGC
TCTGAGCAAGGAGAAGGTAGTAAAGCTCGCTATCGGCTTCCAACACTGTC
TGGTGTTATGCGAGTCTGGAGCGGTATACGGTTGGGGTAAGGGCGAGCGC
GGGCAGCTGGGGACTGGAGATGATGCGTCGGAGGAGCTTGCTGTACAAGA
TGCTCTTTCGAGCCTCGTCAGCCGTAGGTCCTCTATTAGCCCCATCCCCT
CATTCCCGCTTGTGTTGCCCATTCGCTTCTCTCCTGCGACGGCATCGCCA
CCGCAAGCTTCACGTCTATACCCACGGCGAAGGCTTCCTGGGGTGTTTGG
GACATGGGAATTTTTCTGCGTTGGATGAGGTGCAGAGAGTTGATGGCGTC
GCAGCTGTGGACATACGGCAGGGTTCAGCCGGCTGGACGCACTCTGCGGC
AGTCGACTCACAGGGGCGACTGCTAGTATGGGGAAGGCCGTACGACTTCA
AGGGGTCCTTGAGGCTCAACAATATGCAGCGTGTGTTCCCTATTCTCGTG
CGTGCGGTCAATGCGTTCTCGAACCGTGGTGAGGTCATGCCTGAGCCAGT
CATCGTGCCCATCCGTACTACCGCGGAGGTCATGGCACAACCCTACAGGG
ATGATCGCAGCAGTCTGCTTACTTCCATCGCCGCGGCTGCAACCACCGCC
ACTACGAGCACAAGGGCACCCCCACCAGTACCACCATCGAACACCTTAAT
GACTAACTTCAAATCTGGTTTCGGACAAAGGGACTACGCGTCCATGGTAG
ACCCGACACATGCCGTGTCAGTGTCCCATGGTCCTGCAGGTCCCAAAGCA
GTAGGTGTCGCGTGCTCTGCAGCACTCACTGTTGTGTTGACGGAGCGCGG
GCGGGTCTACTGTATGGGGCAGAACCGGTGGGGACAGTGTGGGCAGGGTC
CCAGTGGGCCTGATCACGTCTTCGAGCCGCTACTAGTCCGGGGGAAGGCT
CTGAGCAAGGAGAAGGTAGTAAAGCTCGCTATCGGCTTCCAACACTGTCT
GGTGTTATGCGAGTCTGGAGCGGTATACGGTTGGGGTAAGGGCGAGCGCG
GGCAGCTGGGGACTGGAGATGATGCGTCGGAGGAGCTTGCTGTACAAGTT
CGATTACCTGGCAGAGCCGTTTGTATTAGTAGTGGCTTCAACCATGCTGT
CGCATTGCTAGAAAATGGTGATGCCTACATCTGGGGGAAGATGCAGCACT
TCGAGGTGAAGAAAGAAGGCGGCATTCCTCTTCACCATGACCAATTACTC
CCGCGCAAGGTAGACGCAGAAGGGGTTCGATATGTAGAGGTGTTTTGTTC
TTCATTTCACACGGTGCTGCGTGCGGATAATGGTGAAGTGCTAATGTGCG
GAGTTGAGCGAGATACGCGGAGAATGGTGCACAAACCGGTCAAGTTCGAT
TACCTGGCAGAGCCGTTTGTATTAGTAGTGGCTTCAACCATGCTGTCGCA
TTGCTAGAAAATGGTGATGCCTACATCTGGGGGAAGATGCAGCACTTCGA
GGTGAAGAAAGAAGGCGGCATTCCTCTTCACCATGACCAATTACTCCCGC
GCAAGGTAGACGCAGAAGGGGTTCGATATGTAGAGGTGTTTTGTTCTTCA
TTTCACACGGTGCTGCGTGCGGATAATGGTGAAGTGCTAATGTGCGGAGT
TGAGCGAGATACGCGGAGAATGGTGCACAAACCGGTCAAGGTTGACATGC
CCGGCTCGGGGAAAGGTTCCTTCCTCAATGGCTTCAACGAGACGTTGTTT
CACACCACTACGCCCGAGGGTAGGCGACGGTTATATGCGCTCACCTATAC
AAGCGAGGGTGCCGCGGCTTCTCCGTTTGTGTTGCCTGGACTTGATGAAG
CGGTCGTCGATGAAATAGAGAGCGTGTCTGTGGGATGGAAGCACACTATC
GCCCTCTTGTAAGTTGACATGCCCGGCTCGGGGAAAGGTTCCTTCCTCAA
TGGCTTCAACGAGACGTTGTTTCACACCACTACGCCCGAGGGTAGGCGAC
GGTTATATGCGCTCACCTATACAAGCGAGGGTGCCGCGGCTTCTCCGTTT
GTGTTGCCTGGACTTGATGAAGCGGTCGTCGATGAAATAGAGAGCGTGTC
TGTGGGATGGAAGCACACTATCGCCCTCTTGTAA
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