mRNA_H-paniculata_contig19496.4930.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE) HSP 1 Score: 387 bits (995), Expect = 3.290e-126 Identity = 237/463 (51.19%), Postives = 293/463 (63.28%), Query Frame = 2
Query: 104 RHRH----RKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAV-DSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHTTTPEGRRRLYALTYTSEGAAASPFVLPGLDEAVVDEIESVSVGWKHTIALL 1477
RH H R LHVYTHGEGFLG LGHG+FSA +E V +A+ D+R SAGWTHSAAV G +LVWGRP+D K LR+N +QR+FP +V A+NA ++ EV+P PV VP+ +A+P +S +T+ P S +L P+ +A VACSAALTVVL E G+VYCMG NRWGQCGQGP VFEPL V G+AL +E+VVKLA+G Q LVLCESG V+GWGKG RGQLG GD+ E L +V LPG+ V + XXXXXXXXXXXXXXXXX MQ EVK +G +P++HDQL PRKVD G R VE FCSS +T+LR ++G VLM G E DTRR V PV+VD+P S GSF GFN+T+ TTT + +++TS GA +PF LPGL E ++SVSVGW+HT+ L+
Sbjct: 33 RHHHQSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPL------IAKPSAASTASTITAAFHDAR------------PSSYSLPA--------------------------PSSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVGGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETME-LPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVDVGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEVDIPASEPGSFFGGFNDTIVKTTTAVDLPTFHRVSFTSAGARVTPFTLPGLAEGT--RVDSVSVGWQHTVVLV 448
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI) HSP 1 Score: 380 bits (976), Expect = 2.430e-123 Identity = 240/480 (50.00%), Postives = 300/480 (62.50%), Query Frame = 2
Query: 104 RHRH----RKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAV-DSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHT-TTPEGRR----------------RLYALTYTSEGAAASPFVLPGLDEAVVDEIESVSVGWKHTIALL 1477
RH H R LHVYTHGEGFLG LGHG+FSA ++ V +A+ D+R SAGWTHSAAV G +LVWGRP+D K LR+N +QR+FP +V A+NA ++ EV+P PV VP+ MA+P +S +T A++ D ++ P+ +A VACSAALTVVL E G+VYCMG NRWGQCGQGP VFEPL V G+AL +E VVKLA+GFQ LVLCESG V+GWGKG RGQLG G + E L +V LPG+ V XXXXXXXXXXXXXXXXXXXXMQ EVK +G +P++HDQL PRKVD G R VE FCSSF+T+LR ++G VLM G+E DTRR V PV+VD+P S GSF +GFN+T+ T +TP + +++TS GA +PF LPG+ E ++SVSVGW+HT+AL+
Sbjct: 17 RHHHQSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPL------MAEPAAASTASTVT--------------------------------------AALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMME-LPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEVDIPASEPGSFFSGFNDTIVKTASTPVASTITDKSTAAGGTGADLPTFHRVSFTSAGARVTPFALPGVPEGT--RVDSVSVGWQHTVALV 449
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: W7T9T9_9STRA (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9T9_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.390e-32 Identity = 138/482 (28.63%), Postives = 193/482 (40.04%), Query Frame = 2
Query: 71 RLCCPFASLLRRHRHRKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGP---------SGPDHVFEPL---------------LVRGKALSKEK--------------------VVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG--RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEG---GIPLHHDQLLPRKVDAEGV---RYVEVFCSSFHT--VLRADNG-----EVLMCGVERDTRRMVHKPVKVDMP-----GSGKGSFLNGFNETLFHT 1324
R+C ++S R H L Y+ GEG++G LGHG+F + +D +A I+ +AGW H+A V S GRLL++GRP+D + +L L +M + P LVR A + P + +A + R +L S P + L P G + V VACS ALT ++ GRVYCMGQN +GQCG G SG P +V + L +E+ VV +A+GFQH + SG + WGKGERGQLG G + A +V LP R V ++ Q + EG G L+ DQLLPR+V+ G +V C FHT +LR + + M G+ R M K V +P GSG+ + G + HT
Sbjct: 60 RICIAYSSR-RISTHTTL--YSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFD-------SPRKGSAAFL-------REDVLLS------------------PRAFPL----------------------------PEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESXXXXXXEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHT 478
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: W7TTV1_9STRA (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTV1_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.700e-29 Identity = 129/458 (28.17%), Postives = 181/458 (39.52%), Query Frame = 2
Query: 143 EGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGP---------SGPDHVFEPL---------------LVRGKALSKEK--------------------VVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG--RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEG---GIPLHHDQLLPRKVDAEGV---RYVEVFCSSFHT--VLRADNG-----EVLMCGVERDTRRMVHKPVKVDMP-----GSGKGSFLNGFNETLFHT 1324
+G++G LGHG+F + +D +A I+ +AGW H+A V S GRLL++GRP+D + +L L +M + P LVR A + P + +A + R +L S P + L P G + V VACS ALT ++ GRVYCMGQN +GQCG G SG P +V + L +E+ VV +A+GFQH + SG + WGKGERGQLG G + A +V LP R V ++ Q + EG G L+ DQLLPR+V+ G +V C FHT +LR + + M G+ R M K V +P GSG+ + G + HT
Sbjct: 158 QGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFD-------SPRKGSAAFL-------REDVLLS------------------PRAFPL----------------------------PEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESXXXXXXEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHT 555
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC) HSP 1 Score: 116 bits (291), Expect = 4.210e-24 Identity = 126/501 (25.15%), Postives = 195/501 (38.92%), Query Frame = 2
Query: 116 RKLHVYTHGEGFLGCLGHGNFSAL-----DEVQRVDGVAAVD--IRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVR--AVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLV------------RGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASE-ELAVQVRLPGRAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLP-------RKVDAE------------GVRYVEVFCSSFHTVLRADNGEVLMCGVERDTRRMVHKPVKVDMPGSGKGSFLNGFNETLFHTTT--PEGRRRLYALTYTSEGAAASPFVLPGLDEAVVDE-----IESVSVGWKHTIAL 1474
R VY G G+ G G+G F DE + + D ++ S GW H+A + RLL+ GRP+DF LRL + P+ VR A+N+ N + + PI ++ P + S F + ++ D SVS CSAALT ++TE G+VY G N +GQCG G + +HV+ P RG+ VV +A+G QH + L E G V+ WGKGERGQLG G +E A+ V+ RA + + + K+ + + +LP +KV ++ GVR + C S HT + D+G V G+ T+ +H+ V++ PG + F+ + TT +GR+ L + E P + ++DE I + W H++ +
Sbjct: 29 RTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLKIYDGSVKDISLGWGHTAILTEDRRLLLAGRPHDFSVLLRLRRL----PLWVRNYAINSSINEFRGLDSRSVHPIALIGRLIT-----------------------WLAIRFKYPTTELEAARRHSIFPELAEIALPDSEVPSSVS------------CSAALTAIVTESGKVYAFGLNGFGQCGIGMTS-NHVWNPSSPLRGLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQGLITTEAHTALPVK---RAFTLGEKMKPQYQTIGQVTQIDAGMIHCAALTKDNEVLIWGKHVLPLLPGDENKKVSSDARLPYILPGLPKGVRVERIACGSHHTAILLDDGSVYAAGIATHTKEPIHEAVQILPPGVVNRP-VRQFDAHMDRTTIVGADGRQVLQLHLWKDEELREFAAFTPAWVDHILDENPFAKISMIHRSWIHSVVV 485
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S3XQZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ6_HETAK) HSP 1 Score: 105 bits (263), Expect = 1.730e-22 Identity = 74/217 (34.10%), Postives = 91/217 (41.94%), Query Frame = 2
Query: 119 KLHVYTHGEGFLGCLGHGNFS-ALDEVQRVDGVAAVD-IRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQG 763
K + + GEGFLGCLG GNF L Q V G+ + + ++GW HSAAV G +WGRP+DFK LRLNNM L + NAFS+ EV+ P ++ + PP +AVGVACSA LT V+T GRV C GQNRWGQCG G
Sbjct: 34 KTTLLSAGEGFLGCLGTGNFEDQLISFQPVVGLPKDEKVIAIASGWAHSAAVTQAGACYIWGRPFDFKNVLRLNNMHTASRALAQLANAFSSPEEVLLAPRVMAL---------------------------------------PPXXXXXXXXXXXXXXE-------------------ATRAVGVACSAGLTAVVTSDGRVLCFGQNRWGQCGTG 192
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S2SKJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKJ4_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.490e-20 Identity = 90/358 (25.14%), Postives = 136/358 (37.99%), Query Frame = 2
Query: 164 GHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPA------GPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPG---RAVCISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPL--HHDQLLPRKVDAEGVRYVEVFCSSFHTVLRADNGEV 1204
GHG+ + + ++ + V +AGW HSAA+ GRLL+WG+P++ + LRL R TA+ S + +F SG ++ P A + PA V V+C A T VL E G + G N +GQCG G P F+P+ G AL + + +++GFQH + SG + WGKGERGQLGTG + L +++ LP R +S M + P+ H DQL+PR V V S++HT + ++ ++
Sbjct: 2 GHGDLEVCSKPEVIETIKDVPCTAVAAGWAHSAALAQDGRLLLWGQPFELRNVLRL--------------------------------RRTAQT-----------------------------------SGRALASFISGMNW-----LLSPNGAPGLRSVPAEFPLPSSSAPVKVSCGAGFTAVLMEDGSLLLFGLNTFGQCGNGEESPTE-FQPVQALG-ALQDQGAMDVSLGFQHAAAITRSGDIVTWGKGERGQLGTGQTVNSSLPLRITLPTDGKRFATVSCGFNHTAALREDGQVFVWGKMLSTVEDQINMRPVVTHEDQLVPRHVSLPSA-VKAVASSAYHTAILTEDHQL 284
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA) HSP 1 Score: 100 bits (248), Expect = 6.000e-19 Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 2
Query: 647 PAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDDASEELAVQVRLPGRAVC-ISXXXXXXXXXXXXXXXXXXXXMQHFEVKKEGGIPLHHDQLLPRKV-DAEGVRYVEVFCSSFHTVLRADNGEVLMCG 1216
P G +A + CSAALT+VL E GR++ G N +GQCG G V EP VR AL + VV +A G+QH L + SGAV+ WGKGERGQLG G + + L G+AV +S + + E K E G DQ++PR V ++ V ++ CS FHT + ++ + G
Sbjct: 130 PEGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREG---VSEPEPVR-VALDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAVAAVSAGFNHSSALTRDGELFVWGKLLNLEGKDENG----GDQVVPRLVRTSDAVTLLQ--CSHFHTAFLTADDKIWVVG 311
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A7S1CCH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.850e-18 Identity = 81/306 (26.47%), Postives = 122/306 (39.87%), Query Frame = 2
Query: 110 RHRKLHVYTHGEGFLGCLGHGNFSALDEVQRVDGVAAV--DIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILVRAVNAFSNRGEVMPEPVIVPIRTTAEVMAQPYRDDRSSLLTSIXXXXXXXXXXXXXXXXXPPSNTLMTNFKSGFGQRDYASMVDPTHAVSVSHGPAGPKAVGVACSAALTVVLTERGRVYCMGQNRWGQCGQGPSGPDHVFEPLLVRGKALSKEKVVKLAIGFQHCLVLCESGAVYGWGKGERGQLGTGDD---------ASEELAVQVRLPGRAVCIS 994
R +++ ++ G+G+LG LGHGN +V + +A V D+ AGW HSAA S G ++WGRPYDFK +LR +++ P L RA+ S R V+ + I E + +L + T F D+A + G V C A T+ L G++Y G+ GQ G G + P+ RG L +V GF H + + G + WGK + QL D A + L ++ LP AV ++
Sbjct: 43 RRQRVGAFSFGKGYLGALGHGNLGDAPDVTLIRELAEVGADVTSVGAGWGHSAATTSDGAAVIWGRPYDFKQTLRTHHIHDFAPWLARALGRISGRV-VLLSTLPTRIDGADEEHFERVACGAGALTVGVTRSGRVFSVGVNFHGQCGTGATSACEF-------DWAPVASLD----------GAGIVDARCGFAHTLALAADGQLYAWGRGHRGQLGLGDTHAYKEALPVGGRGSVLEGRRVTAFDAGFSHSACVTDDGGAWVWGKMQGEQLVDADVRGARPTRIVADQLLPRRLALPAPAVAVA 330
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Match: A0A418ALH5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ALH5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.240e-14 Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2
Query: 128 VYTHGEGFLGCLGHGNFSALDEVQRVDGVAAVDIRQGSAGWTHSAAVDSQGRLLVWGRPYDFKGSLRLNNMQRVFPILV---------RAVNAFSNRGEVMPEPVI 418
+Y++GEG+LG LGHGN+S+++ + +D +D+ Q S GW+H+ VD+ G+ V+GR + FK +R NM R P + R+V AF+ +PE V+
Sbjct: 16 LYSYGEGYLGTLGHGNYSSVEAPKALDAFDGLDLVQASTGWSHTGVVDAHGKAYVFGRTHHFKNVIRAINMHRFAPWFLDFANKVGGHRSVEAFTPVEVTLPEKVV 121 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19496.4930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19496.4930.1 >prot_H-paniculata_contig19496.4930.1 ID=prot_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp MLFRASSAVGPLLAPSPHSRLCCPFASLLRRHRHRKLHVYTHGEGFLGCLback to top mRNA from alignment at H-paniculata_contig19496:19..3385- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19496.4930.1 ID=mRNA_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3367bp|location=Sequence derived from alignment at H-paniculata_contig19496:19..3385- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19496:19..3385- >mRNA_H-paniculata_contig19496.4930.1 ID=mRNA_H-paniculata_contig19496.4930.1|Name=mRNA_H-paniculata_contig19496.4930.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig19496:19..3385- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |