prot_H-paniculata_contig19484.4927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19484.4927.1
Unique Nameprot_H-paniculata_contig19484.4927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
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BLAST of mRNA_H-paniculata_contig19484.4927.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.260e-19
Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0 
Query:    2 WRVGEETAFATRLRKKDQALKEKWAVRETAQRRDRTQAQQEYGKLEGKLRKALSEVEARERGLKTREEAWRTE 74
            WRV EE  FA RLR+KD+AL++KW  RE  +RR+ + AQ +Y KLEGKLRKALSEV ARER LK REE+W+T+
Sbjct: 1022 WRVVEEAKFAKRLREKDEALEQKWEAREATRRRELSHAQADYSKLEGKLRKALSEVGARERQLKAREESWKTD 1094
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BLAST of mRNA_H-paniculata_contig19484.4927.1 vs. uniprot
Match: A0A835Z851_9STRA (DUF3668 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z851_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.840e-10
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:    2 WRVGEETAFATRLRKKDQALKEKWAVRETAQRRDRTQAQQEYGKLEGKLRKALSEVEAR 60
            WR  EE AFA +L  KD AL+++WA R   +RR   QAQ EY +LEGKLR+AL++VE R
Sbjct:  927 WRAREEAAFARKLAAKDAALEQRWAQRXAERRRSLAQAQAEYARLEGKLRRALTDVEVR 985
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19484.4927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXH9_ECTSI2.260e-1964.38Centrosomal protein 120 n=1 Tax=Ectocarpus silicul... [more]
A0A835Z851_9STRA6.840e-1055.93DUF3668 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19484contigH-paniculata_contig19484:618..3770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19484.4927.1mRNA_H-paniculata_contig19484.4927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19484 618..3771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19484.4927.1 ID=prot_H-paniculata_contig19484.4927.1|Name=mRNA_H-paniculata_contig19484.4927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
QWRVGEETAFATRLRKKDQALKEKWAVRETAQRRDRTQAQQEYGKLEGKL
RKALSEVEARERGLKTREEAWRTE
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