prot_H-paniculata_contig19481.4926.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19481.4926.1
Unique Nameprot_H-paniculata_contig19481.4926.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
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BLAST of mRNA_H-paniculata_contig19481.4926.1 vs. uniprot
Match: D7FTP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP6_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.220e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    2 SIEVLLLEDLVECKEKLSEELTSTASRAVTIEGVVAALPNEDDVVRMRAYNWQDVQDLQGV 62
            SIEV+LLEDLVECKEKL EEL ST++R  T+ GVVAALP E D+ R+RAYNWQDVQDLQGV
Sbjct:   29 SIEVMLLEDLVECKEKLEEELKSTSARGDTMNGVVAALPAEGDIARLRAYNWQDVQDLQGV 89
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BLAST of mRNA_H-paniculata_contig19481.4926.1 vs. uniprot
Match: A0A6H5KT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT89_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 5.970e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    2 SIEVLLLEDLVECKEKLSEELTSTASRAVTIEGVVAALPNEDDVVRMRAYNWQDVQDLQGV 62
            SIEV+LLEDLVECKEKL EEL ST++RA T+ GVVAALP E D+ R+RAYNWQDVQDLQ V
Sbjct:  250 SIEVMLLEDLVECKEKLEEELKSTSARAETMNGVVAALPAEGDIARLRAYNWQDVQDLQEV 310
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BLAST of mRNA_H-paniculata_contig19481.4926.1 vs. uniprot
Match: A0A835Z020_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z020_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.810e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0 
Query:    1 MSIEVLLLEDLVECKEKLSEELTSTASRAVTIEGVVAALPNEDDVVRMRAYNWQDVQDLQ 60
            +SIEV+LLED+ +C+E+L  EL ST +R   I+GVVAALP  DD  R R Y+W+D+Q LQ
Sbjct:   28 ISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQ 87
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19481.4926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTP6_ECTSI2.220e-2177.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT89_9PHAE5.970e-2177.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z020_9STRA6.810e-1356.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19481contigH-paniculata_contig19481:3514..4641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19481.4926.1mRNA_H-paniculata_contig19481.4926.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19481 3514..4653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19481.4926.1 ID=prot_H-paniculata_contig19481.4926.1|Name=mRNA_H-paniculata_contig19481.4926.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
MSIEVLLLEDLVECKEKLSEELTSTASRAVTIEGVVAALPNEDDVVRMRA
YNWQDVQDLQGV
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